RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
UBFD1-201ENST00000395878 GBP3Q9H0R5 595 aa20.22■□□□□ 0.83
UBFD1-201ENST00000395878 GOLGA6L7A0A1B0GV03 622 aa20.21■□□□□ 0.83
UBFD1-201ENST00000395878 TNPO1Q92973 898 aaKnown RBP20.21■□□□□ 0.83
UBFD1-201ENST00000395878 PHF8Q9UPP1 1060 aa20.21■□□□□ 0.83
UBFD1-201ENST00000395878 PAF1Q8N7H5 531 aa20.21■□□□□ 0.83
UBFD1-201ENST00000395878 MINDY4BA8MYZ0 360 aa20.21■□□□□ 0.83
UBFD1-201ENST00000395878 CTCFLQ8NI51 663 aaPredicted RBP20.21■□□□□ 0.83
UBFD1-201ENST00000395878 PLB1Q6P1J6 1458 aa20.21■□□□□ 0.83
UBFD1-201ENST00000395878 USHBP1Q8N6Y0 703 aa20.21■□□□□ 0.83
UBFD1-201ENST00000395878 PPP1R12BO60237 982 aaPredicted RBP20.2■□□□□ 0.82
UBFD1-201ENST00000395878 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
UBFD1-201ENST00000395878 KRI1Q8N9T8 703 aaKnown RBP20.2■□□□□ 0.82
UBFD1-201ENST00000395878 ECHDC1Q9NTX5 307 aa20.2■□□□□ 0.82
UBFD1-201ENST00000395878 ZNF213O14771 459 aa20.2■□□□□ 0.82
UBFD1-201ENST00000395878 RNF41Q9H4P4 317 aaPredicted RBP20.2■□□□□ 0.82
UBFD1-201ENST00000395878 TMOD2Q9NZR1 351 aa20.2■□□□□ 0.82
UBFD1-201ENST00000395878 RRP9O43818 475 aaKnown RBP20.2■□□□□ 0.82
UBFD1-201ENST00000395878 DDX19AQ9NUU7 478 aaKnown RBP20.2■□□□□ 0.82
UBFD1-201ENST00000395878 JAKMIP3Q5VZ66 844 aa20.19■□□□□ 0.82
UBFD1-201ENST00000395878 CENPHQ9H3R5 247 aa20.19■□□□□ 0.82
UBFD1-201ENST00000395878 SKAP1Q86WV1 359 aa20.19■□□□□ 0.82
UBFD1-201ENST00000395878 MKNK2Q9HBH9 465 aa20.19■□□□□ 0.82
UBFD1-201ENST00000395878 SLC5A1P13866 664 aa20.19■□□□□ 0.82
UBFD1-201ENST00000395878 MPRIPQ6WCQ1 1025 aa20.19■□□□□ 0.82
UBFD1-201ENST00000395878 POLR3DP05423 398 aaPredicted RBP20.19■□□□□ 0.82
UBFD1-201ENST00000395878 SLC12A7Q9Y666 1083 aa20.19■□□□□ 0.82
UBFD1-201ENST00000395878 SPA17Q15506 151 aa20.18■□□□□ 0.82
UBFD1-201ENST00000395878 FKBP15Q5T1M5 1219 aa20.18■□□□□ 0.82
UBFD1-201ENST00000395878 IQCA1Q86XH1 822 aa20.18■□□□□ 0.82
UBFD1-201ENST00000395878 CCDC102AQ96A19 550 aa20.18■□□□□ 0.82
UBFD1-201ENST00000395878 TBC1D9Q6ZT07 1266 aa20.18■□□□□ 0.82
UBFD1-201ENST00000395878 KIF18AQ8NI77 898 aa20.18■□□□□ 0.82
UBFD1-201ENST00000395878 FAM193AP78312 1265 aa20.17■□□□□ 0.82
UBFD1-201ENST00000395878 TMCO3Q6UWJ1 677 aa20.17■□□□□ 0.82
UBFD1-201ENST00000395878 TOP1P11387 765 aaKnown RBP20.17■□□□□ 0.82
UBFD1-201ENST00000395878 ENOX2Q16206 610 aaKnown RBP20.17■□□□□ 0.82
UBFD1-201ENST00000395878 A0A087WZG4 1122 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 ANKRD18BA2A2Z9 1011 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 TSG101Q99816 390 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 C14orf93Q9H972 538 aaKnown RBP20.16■□□□□ 0.82
UBFD1-201ENST00000395878 AMOTL2Q9Y2J4 779 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 ANKRD36BQ8N2N9 1353 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 DESP17661 470 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 PPP1R1BQ9UD71 204 aaPredicted RBP20.16■□□□□ 0.82
UBFD1-201ENST00000395878 CLIP2Q9UDT6 1046 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 NOS1P29475 1434 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 KIF5CO60282 957 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 RAB34Q9BZG1 259 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 NEMFO60524 1076 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 SSRP1Q08945 709 aaKnown RBP20.16■□□□□ 0.82
UBFD1-201ENST00000395878 IDI1Q13907 227 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 TAX1BP1Q86VP1 789 aa20.16■□□□□ 0.82
UBFD1-201ENST00000395878 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
UBFD1-201ENST00000395878 MPHOSPH10O00566 681 aaKnown RBP20.15■□□□□ 0.82
UBFD1-201ENST00000395878 GOLGA8BA8MQT2 603 aa20.15■□□□□ 0.82
UBFD1-201ENST00000395878 PIK3R4Q99570 1358 aa20.15■□□□□ 0.82
UBFD1-201ENST00000395878 GOLGA8AA7E2F4 631 aa20.15■□□□□ 0.82
UBFD1-201ENST00000395878 ZPR1O75312 459 aa20.15■□□□□ 0.82
UBFD1-201ENST00000395878 KLHL10Q6JEL2 608 aa20.15■□□□□ 0.82
UBFD1-201ENST00000395878 DZIP1Q86YF9 867 aaKnown RBP20.15■□□□□ 0.82
UBFD1-201ENST00000395878 GUCY1B3Q02153 619 aa20.14■□□□□ 0.82
UBFD1-201ENST00000395878 FGFR1OPO95684 399 aaKnown RBP20.14■□□□□ 0.81
UBFD1-201ENST00000395878 TNIP1Q15025 636 aa20.14■□□□□ 0.81
UBFD1-201ENST00000395878 TTC22Q5TAA0 569 aa20.14■□□□□ 0.81
UBFD1-201ENST00000395878 MBIPQ9NS73 344 aa20.14■□□□□ 0.81
UBFD1-201ENST00000395878 ANKRD62A6NC57 917 aa20.14■□□□□ 0.81
UBFD1-201ENST00000395878 CRACR2AQ9BSW2 395 aa20.14■□□□□ 0.81
UBFD1-201ENST00000395878 IFIT3O14879 490 aaKnown RBP20.14■□□□□ 0.81
UBFD1-201ENST00000395878 STX6O43752 255 aa20.14■□□□□ 0.81
UBFD1-201ENST00000395878 RANBP6O60518 1105 aaKnown RBP20.14■□□□□ 0.81
UBFD1-201ENST00000395878 POTEJP0CG39 1038 aa20.14■□□□□ 0.81
UBFD1-201ENST00000395878 CALRP27797 417 aaKnown RBP20.14■□□□□ 0.81
UBFD1-201ENST00000395878 DISP3Q9P2K9 1392 aa20.13■□□□□ 0.81
UBFD1-201ENST00000395878 FSIP1Q8NA03 581 aa20.13■□□□□ 0.81
UBFD1-201ENST00000395878 ARHGAP45Q92619 1136 aa20.13■□□□□ 0.81
UBFD1-201ENST00000395878 GJB2P29033 226 aa20.13■□□□□ 0.81
UBFD1-201ENST00000395878 CNNM3Q8NE01 707 aa20.13■□□□□ 0.81
UBFD1-201ENST00000395878 TBC1D32Q96NH3 1257 aa20.13■□□□□ 0.81
UBFD1-201ENST00000395878 TTF1Q15361 905 aaPredicted RBP20.13■□□□□ 0.81
UBFD1-201ENST00000395878 ZNF444Q8N0Y2 327 aaPredicted RBP20.13■□□□□ 0.81
UBFD1-201ENST00000395878 HMG20BQ9P0W2 317 aa20.13■□□□□ 0.81
UBFD1-201ENST00000395878 MAP3K2Q9Y2U5 619 aa20.13■□□□□ 0.81
UBFD1-201ENST00000395878 CETN2P41208 172 aa20.12■□□□□ 0.81
UBFD1-201ENST00000395878 CRACR2BQ8N4Y2 399 aaPredicted RBP20.12■□□□□ 0.81
UBFD1-201ENST00000395878 TMEM266Q2M3C6 531 aa20.12■□□□□ 0.81
UBFD1-201ENST00000395878 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
UBFD1-201ENST00000395878 CASQ1P31415 396 aa20.12■□□□□ 0.81
UBFD1-201ENST00000395878 MATR3P43243 847 aaKnown RBP eCLIP20.12■□□□□ 0.812e-7■■□□□ 12.8
UBFD1-201ENST00000395878 CKAP2LQ8IYA6 745 aa20.12■□□□□ 0.81
UBFD1-201ENST00000395878 VPS36Q86VN1 386 aa20.12■□□□□ 0.81
UBFD1-201ENST00000395878 USP25Q9UHP3 1055 aa20.12■□□□□ 0.81
UBFD1-201ENST00000395878 KIF20AO95235 890 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 GSDMDP57764 484 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 HDAC1Q13547 482 aaPredicted RBP20.11■□□□□ 0.81
UBFD1-201ENST00000395878 CACNA2D4Q7Z3S7 1137 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 CCDC194A0A1B0GVG4 234 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 MAP9Q49MG5 647 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 RALGAPBQ86X10 1494 aa20.11■□□□□ 0.81
UBFD1-201ENST00000395878 MCM3P25205 808 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 660.4 ms