RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 KAZALD1Q96I82 304 aa19■□□□□ 0.63
CPSF7-202ENST00000394888 ERBB3P21860 1342 aa19■□□□□ 0.63
CPSF7-202ENST00000394888 MX1P20591 662 aa18.99■□□□□ 0.63
CPSF7-202ENST00000394888 RABEP1Q15276 862 aa18.99■□□□□ 0.63
CPSF7-202ENST00000394888 LRP10Q7Z4F1 713 aa18.99■□□□□ 0.63
CPSF7-202ENST00000394888 HMMRO75330 724 aa18.99■□□□□ 0.63
CPSF7-202ENST00000394888 CHMLP26374 656 aa18.99■□□□□ 0.63
CPSF7-202ENST00000394888 ANKRD24Q8TF21 1146 aa18.99■□□□□ 0.63
CPSF7-202ENST00000394888 ESYT1Q9BSJ8 1104 aa18.99■□□□□ 0.63
CPSF7-202ENST00000394888 STRCQ7RTU9 1775 aa18.99■□□□□ 0.63
CPSF7-202ENST00000394888 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-202ENST00000394888 USP42Q9H9J4 1324 aaKnown RBP18.98■□□□□ 0.63
CPSF7-202ENST00000394888 PPP1R42Q7Z4L9 355 aa18.97■□□□□ 0.63
CPSF7-202ENST00000394888 C14orf37Q86TY3 774 aa18.97■□□□□ 0.63
CPSF7-202ENST00000394888 GAS2L3Q86XJ1 694 aa18.97■□□□□ 0.63
CPSF7-202ENST00000394888 AOX1Q06278 1338 aa18.97■□□□□ 0.63
CPSF7-202ENST00000394888 PI4KAP2A4QPH2 592 aa18.97■□□□□ 0.63
CPSF7-202ENST00000394888 MTX1Q13505 466 aa18.97■□□□□ 0.63
CPSF7-202ENST00000394888 ZNF530Q6P9A1 599 aaPredicted RBP18.97■□□□□ 0.63
CPSF7-202ENST00000394888 ZGPATQ8N5A5 531 aaKnown RBP18.97■□□□□ 0.63
CPSF7-202ENST00000394888 PI4KAP1Q8N8J0 262 aa18.97■□□□□ 0.63
CPSF7-202ENST00000394888 PANK2Q9BZ23 570 aa18.97■□□□□ 0.63
CPSF7-202ENST00000394888 ERC2O15083 957 aa18.96■□□□□ 0.63
CPSF7-202ENST00000394888 TOGARAM1Q9Y4F4 1720 aa18.96■□□□□ 0.63
CPSF7-202ENST00000394888 HSP90AB1P08238 724 aaKnown RBP18.96■□□□□ 0.63
CPSF7-202ENST00000394888 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.96■□□□□ 0.63
CPSF7-202ENST00000394888 DCCP43146 1447 aa18.96■□□□□ 0.63
CPSF7-202ENST00000394888 UTYO14607 1347 aa18.95■□□□□ 0.62
CPSF7-202ENST00000394888 BTBD11A6QL63 1104 aa18.95■□□□□ 0.62
CPSF7-202ENST00000394888 DDX17Q92841 729 aaKnown RBP18.95■□□□□ 0.62
CPSF7-202ENST00000394888 TCHHQ07283 1943 aa18.95■□□□□ 0.62
CPSF7-202ENST00000394888 KRT28Q7Z3Y7 464 aa18.94■□□□□ 0.62
CPSF7-202ENST00000394888 DNAAF4Q8WXU2 420 aa18.94■□□□□ 0.62
CPSF7-202ENST00000394888 UBTFL1P0CB47 393 aaPredicted RBP18.93■□□□□ 0.62
CPSF7-202ENST00000394888 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
CPSF7-202ENST00000394888 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
CPSF7-202ENST00000394888 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
CPSF7-202ENST00000394888 RTN4Q9NQC3 1192 aaKnown RBP18.93■□□□□ 0.62
CPSF7-202ENST00000394888 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
CPSF7-202ENST00000394888 DDX11L8A8MPP1 907 aa18.92■□□□□ 0.62
CPSF7-202ENST00000394888 CHAMP1Q96JM3 812 aa18.92■□□□□ 0.62
CPSF7-202ENST00000394888 GZF1Q9H116 711 aaPredicted RBP18.92■□□□□ 0.62
CPSF7-202ENST00000394888 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
CPSF7-202ENST00000394888 RHPN1Q8TCX5 695 aa18.91■□□□□ 0.62
CPSF7-202ENST00000394888 BAG4O95429 457 aaKnown RBP18.91■□□□□ 0.62
CPSF7-202ENST00000394888 PLEKHO1Q53GL0 409 aaPredicted RBP18.91■□□□□ 0.62
CPSF7-202ENST00000394888 CUL4AQ13619 759 aa18.89■□□□□ 0.61
CPSF7-202ENST00000394888 TMEM94Q12767 1356 aa18.89■□□□□ 0.61
CPSF7-202ENST00000394888 IGKV5-2P06315 115 aa18.89■□□□□ 0.61
CPSF7-202ENST00000394888 CWF19L2Q2TBE0 894 aaKnown RBP18.88■□□□□ 0.61
CPSF7-202ENST00000394888 REC8O95072 547 aa18.88■□□□□ 0.61
CPSF7-202ENST00000394888 C19orf44Q9H6X5 657 aa18.88■□□□□ 0.61
CPSF7-202ENST00000394888 MAP3K2Q9Y2U5 619 aa18.88■□□□□ 0.61
CPSF7-202ENST00000394888 KCPQ6ZWJ8 1503 aa18.88■□□□□ 0.61
CPSF7-202ENST00000394888 TNS3Q68CZ2 1445 aa18.88■□□□□ 0.61
CPSF7-202ENST00000394888 RAB11FIP3O75154 756 aa18.87■□□□□ 0.61
CPSF7-202ENST00000394888 LMBRD1Q9NUN5 540 aa18.87■□□□□ 0.61
CPSF7-202ENST00000394888 DBF4Q9UBU7 674 aaPredicted RBP18.87■□□□□ 0.61
CPSF7-202ENST00000394888 SRGAP3O43295 1099 aa18.87■□□□□ 0.61
CPSF7-202ENST00000394888 PLEKHG2Q9H7P9 1386 aa18.87■□□□□ 0.61
CPSF7-202ENST00000394888 ZBTB7CA1YPR0 619 aa18.86■□□□□ 0.61
CPSF7-202ENST00000394888 LSG1Q9H089 658 aaKnown RBP18.86■□□□□ 0.61
CPSF7-202ENST00000394888 RRAGDQ9NQL2 400 aaPredicted RBP18.86■□□□□ 0.61
CPSF7-202ENST00000394888 NPHP3Q7Z494 1330 aa18.86■□□□□ 0.61
CPSF7-202ENST00000394888 LAMA4Q16363 1823 aa18.86■□□□□ 0.61
CPSF7-202ENST00000394888 HSPA4P34932 840 aa18.86■□□□□ 0.61
CPSF7-202ENST00000394888 COL9A3Q14050 684 aaPredicted RBP18.86■□□□□ 0.61
CPSF7-202ENST00000394888 KSR2Q6VAB6 950 aa18.86■□□□□ 0.61
CPSF7-202ENST00000394888 PHKG2P15735 406 aa18.85■□□□□ 0.61
CPSF7-202ENST00000394888 TMX3Q96JJ7 454 aa18.85■□□□□ 0.61
CPSF7-202ENST00000394888 MAP4K4O95819 1239 aaPredicted RBP18.85■□□□□ 0.61
CPSF7-202ENST00000394888 PLEKHG5O94827 1062 aa18.85■□□□□ 0.61
CPSF7-202ENST00000394888 TEFQ10587 303 aa18.85■□□□□ 0.61
CPSF7-202ENST00000394888 SURF6O75683 361 aaKnown RBP18.84■□□□□ 0.61
CPSF7-202ENST00000394888 SUCLG2Q96I99 432 aa18.84■□□□□ 0.61
CPSF7-202ENST00000394888 CYP27B1O15528 508 aa18.84■□□□□ 0.61
CPSF7-202ENST00000394888 SGSM2O43147 1006 aa18.84■□□□□ 0.61
CPSF7-202ENST00000394888 SASH1O94885 1247 aa18.84■□□□□ 0.61
CPSF7-202ENST00000394888 PROSER2Q86WR7 435 aaPredicted RBP18.84■□□□□ 0.61
CPSF7-202ENST00000394888 TTC14Q96N46 770 aa18.84■□□□□ 0.61
CPSF7-202ENST00000394888 SLC52A2Q9HAB3 445 aa18.84■□□□□ 0.61
CPSF7-202ENST00000394888 CPDO75976 1380 aa18.84■□□□□ 0.61
CPSF7-202ENST00000394888 ANAPC15P60006 121 aa18.84■□□□□ 0.61
CPSF7-202ENST00000394888 ZC3H6P61129 1189 aaKnown RBP18.84■□□□□ 0.61
CPSF7-202ENST00000394888 PA2G4Q9UQ80 394 aaKnown RBP18.84■□□□□ 0.61
CPSF7-202ENST00000394888 SLC39A6Q13433 755 aa18.83■□□□□ 0.61
CPSF7-202ENST00000394888 RPAP1Q9BWH6 1393 aaPredicted RBP18.83■□□□□ 0.6
CPSF7-202ENST00000394888 ALDH1L1O75891 902 aa18.83■□□□□ 0.6
CPSF7-202ENST00000394888 RAD50Q92878 1312 aa18.83■□□□□ 0.6
CPSF7-202ENST00000394888 ZNF790Q6PG37 636 aa18.82■□□□□ 0.6
CPSF7-202ENST00000394888 GPT2Q8TD30 523 aa18.82■□□□□ 0.6
CPSF7-202ENST00000394888 RASEFQ8IZ41 740 aa18.82■□□□□ 0.6
CPSF7-202ENST00000394888 KIF1BPQ96EK5 621 aa18.82■□□□□ 0.6
CPSF7-202ENST00000394888 GOLGA6L3A6NEY3 463 aa18.82■□□□□ 0.6
CPSF7-202ENST00000394888 EPHA10Q5JZY3 1008 aa18.82■□□□□ 0.6
CPSF7-202ENST00000394888 RILPL2Q969X0 211 aa18.82■□□□□ 0.6
CPSF7-202ENST00000394888 DDX21Q9NR30 783 aaKnown RBP eCLIP18.82■□□□□ 0.6
CPSF7-202ENST00000394888 NSFL1CQ9UNZ2 370 aaKnown RBP18.82■□□□□ 0.6
CPSF7-202ENST00000394888 EPB41L2O43491 1005 aaKnown RBP18.81■□□□□ 0.6
CPSF7-202ENST00000394888 CASC1Q6TDU7 716 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms