RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.61
UBE2D3-207ENST00000394801 RAB3GAP1Q15042 981 aa18.83■□□□□ 0.6
UBE2D3-207ENST00000394801 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.6
UBE2D3-207ENST00000394801 STRCP1A6NGW2 1772 aa18.83■□□□□ 0.6
UBE2D3-207ENST00000394801 ABCC6O95255 1503 aa18.82■□□□□ 0.6
UBE2D3-207ENST00000394801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.82■□□□□ 0.6
UBE2D3-207ENST00000394801 COL18A1P39060 1754 aa18.81■□□□□ 0.6
UBE2D3-207ENST00000394801 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
UBE2D3-207ENST00000394801 ANXA1P04083 346 aa18.81■□□□□ 0.6
UBE2D3-207ENST00000394801 MTX1Q13505 466 aa18.81■□□□□ 0.6
UBE2D3-207ENST00000394801 KSR2Q6VAB6 950 aa18.81■□□□□ 0.6
UBE2D3-207ENST00000394801 CADPS2Q86UW7 1296 aa18.81■□□□□ 0.6
UBE2D3-207ENST00000394801 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
UBE2D3-207ENST00000394801 HYPKQ9NX55 129 aa18.81■□□□□ 0.6
UBE2D3-207ENST00000394801 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
UBE2D3-207ENST00000394801 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
UBE2D3-207ENST00000394801 SRGAP3O43295 1099 aa18.8■□□□□ 0.6
UBE2D3-207ENST00000394801 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
UBE2D3-207ENST00000394801 HSP90AA1P07900 732 aaKnown RBP18.8■□□□□ 0.6
UBE2D3-207ENST00000394801 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
UBE2D3-207ENST00000394801 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
UBE2D3-207ENST00000394801 TNPO1Q92973 898 aaKnown RBP18.79■□□□□ 0.6
UBE2D3-207ENST00000394801 ESYT1Q9BSJ8 1104 aa18.79■□□□□ 0.6
UBE2D3-207ENST00000394801 RHPN1Q8TCX5 695 aa18.79■□□□□ 0.6
UBE2D3-207ENST00000394801 KIF1BPQ96EK5 621 aa18.79■□□□□ 0.6
UBE2D3-207ENST00000394801 CHMLP26374 656 aa18.78■□□□□ 0.6
UBE2D3-207ENST00000394801 PROSER3Q2NL68 480 aa18.78■□□□□ 0.6
UBE2D3-207ENST00000394801 HSP90AB4PQ58FF6 505 aa18.78■□□□□ 0.6
UBE2D3-207ENST00000394801 DDX21Q9NR30 783 aaKnown RBP eCLIP18.78■□□□□ 0.6
UBE2D3-207ENST00000394801 SCN11AQ9UI33 1791 aa18.78■□□□□ 0.6
UBE2D3-207ENST00000394801 BRPF3Q9ULD4 1205 aa18.78■□□□□ 0.6
UBE2D3-207ENST00000394801 MAP3K2Q9Y2U5 619 aa18.78■□□□□ 0.6
UBE2D3-207ENST00000394801 TATP17735 454 aaPredicted RBP18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 DDX17Q92841 729 aaKnown RBP18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 SLC52A2Q9HAB3 445 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 IL1RAPL2Q9NP60 686 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 NLRP2Q9NX02 1062 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 SPG7Q9UQ90 795 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 HDAC5Q9UQL6 1122 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 TNS3Q68CZ2 1445 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 EPB41L2O43491 1005 aaKnown RBP18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 TRAK2O60296 914 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 PHKG2P15735 406 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 ZNF790Q6PG37 636 aa18.77■□□□□ 0.6
UBE2D3-207ENST00000394801 KDM6AO15550 1401 aaPredicted RBP18.77■□□□□ 0.59
UBE2D3-207ENST00000394801 ST18O60284 1047 aa18.76■□□□□ 0.59
UBE2D3-207ENST00000394801 PDIA6Q15084 440 aa18.76■□□□□ 0.59
UBE2D3-207ENST00000394801 CLEC17AQ6ZS10 378 aa18.76■□□□□ 0.59
UBE2D3-207ENST00000394801 IL17RAQ96F46 866 aa18.76■□□□□ 0.59
UBE2D3-207ENST00000394801 GBP4Q96PP9 640 aa18.76■□□□□ 0.59
UBE2D3-207ENST00000394801 TRIM6-TRIM34B2RNG4 842 aa18.75■□□□□ 0.59
UBE2D3-207ENST00000394801 MEGF6O75095 1541 aa18.75■□□□□ 0.59
UBE2D3-207ENST00000394801 UTYO14607 1347 aa18.75■□□□□ 0.59
UBE2D3-207ENST00000394801 SPATA31A3Q5VYP0 1347 aa18.75■□□□□ 0.59
UBE2D3-207ENST00000394801 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
UBE2D3-207ENST00000394801 LINS1Q8NG48 757 aa18.75■□□□□ 0.59
UBE2D3-207ENST00000394801 PI4K2BQ8TCG2 481 aa18.75■□□□□ 0.59
UBE2D3-207ENST00000394801 RILPL2Q969X0 211 aa18.75■□□□□ 0.59
UBE2D3-207ENST00000394801 CPDO75976 1380 aa18.74■□□□□ 0.59
UBE2D3-207ENST00000394801 UNC5CLQ8IV45 518 aa18.74■□□□□ 0.59
UBE2D3-207ENST00000394801 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
UBE2D3-207ENST00000394801 DDX58O95786 925 aaKnown RBP18.74■□□□□ 0.59
UBE2D3-207ENST00000394801 ANAPC15P60006 121 aa18.74■□□□□ 0.59
UBE2D3-207ENST00000394801 NUTM1Q86Y26 1132 aa18.74■□□□□ 0.59
UBE2D3-207ENST00000394801 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
UBE2D3-207ENST00000394801 C9orf78Q9NZ63 289 aaPredicted RBP18.74■□□□□ 0.59
UBE2D3-207ENST00000394801 PTMSP20962 102 aa18.73■□□□□ 0.59
UBE2D3-207ENST00000394801 NFATC2IPQ8NCF5 419 aa18.73■□□□□ 0.59
UBE2D3-207ENST00000394801 CWC22Q9HCG8 908 aaKnown RBP18.73■□□□□ 0.59
UBE2D3-207ENST00000394801 MRC1P22897 1456 aa18.72■□□□□ 0.59
UBE2D3-207ENST00000394801 CABLES1Q8TDN4 633 aa18.72■□□□□ 0.59
UBE2D3-207ENST00000394801 DCAF5Q96JK2 942 aa18.71■□□□□ 0.59
UBE2D3-207ENST00000394801 MCCP23508 829 aa18.71■□□□□ 0.59
UBE2D3-207ENST00000394801 SLC39A6Q13433 755 aa18.71■□□□□ 0.59
UBE2D3-207ENST00000394801 CWF19L2Q2TBE0 894 aaKnown RBP18.71■□□□□ 0.59
UBE2D3-207ENST00000394801 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.58
UBE2D3-207ENST00000394801 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
UBE2D3-207ENST00000394801 NUCB2P80303 420 aa18.7■□□□□ 0.58
UBE2D3-207ENST00000394801 L1TD1Q5T7N2 865 aaKnown RBP18.7■□□□□ 0.58
UBE2D3-207ENST00000394801 PKD1L3Q7Z443 1732 aa18.7■□□□□ 0.58
UBE2D3-207ENST00000394801 GRM8O00222 908 aa18.7■□□□□ 0.58
UBE2D3-207ENST00000394801 CYP27B1O15528 508 aa18.7■□□□□ 0.58
UBE2D3-207ENST00000394801 FSD2A1L4K1 749 aa18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 CYP2E1P05181 493 aaPredicted RBP18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 MCM2P49736 904 aa18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 C5P01031 1676 aa18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 SSFA2P28290 1259 aa18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 CHRNA2Q15822 529 aa18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 SKOR2Q2VWA4 1001 aaPredicted RBP18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 LARP1Q6PKG0 1096 aaKnown RBP18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 KAZALD1Q96I82 304 aa18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 ANO2Q9NQ90 1003 aa18.69■□□□□ 0.58
UBE2D3-207ENST00000394801 ZNF496Q96IT1 587 aaPredicted RBP18.68■□□□□ 0.58
UBE2D3-207ENST00000394801 CLASRPQ8N2M8 674 aaKnown RBP18.68■□□□□ 0.58
UBE2D3-207ENST00000394801 IGKV5-2P06315 115 aa18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 NEK4P51957 841 aa18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 LRP10Q7Z4F1 713 aa18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 CNTROBQ8N137 903 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms