RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 NGEFQ8N5V2 710 aa7.57□□□□□ -1.2
CASC3-202ENST00000394114 TSR2Q969E8 191 aaKnown RBP7.57□□□□□ -1.2
CASC3-202ENST00000394114 THUMPD2Q9BTF0 503 aaKnown RBP7.57□□□□□ -1.2
CASC3-202ENST00000394114 C1orf167Q5SNV9 1468 aa7.57□□□□□ -1.2
CASC3-202ENST00000394114 C20orf194Q5TEA3 1177 aa7.57□□□□□ -1.2
CASC3-202ENST00000394114 PPP4R2Q9NY27 417 aa7.57□□□□□ -1.2
CASC3-202ENST00000394114 BCAR3O75815 825 aa7.56□□□□□ -1.2
CASC3-202ENST00000394114 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
CASC3-202ENST00000394114 KRT28Q7Z3Y7 464 aa7.56□□□□□ -1.2
CASC3-202ENST00000394114 EXOC6Q8TAG9 804 aa7.56□□□□□ -1.2
CASC3-202ENST00000394114 LAS1LQ9Y4W2 734 aaKnown RBP7.56□□□□□ -1.2
CASC3-202ENST00000394114 PALM3A6NDB9 673 aaPredicted RBP7.56□□□□□ -1.2
CASC3-202ENST00000394114 BCL2L13Q9BXK5 485 aa7.56□□□□□ -1.2
CASC3-202ENST00000394114 PNNQ9H307 717 aaKnown RBP7.56□□□□□ -1.2
CASC3-202ENST00000394114 FLT4P35916 1363 aa7.56□□□□□ -1.2
CASC3-202ENST00000394114 DLG5Q8TDM6 1919 aa7.56□□□□□ -1.2
CASC3-202ENST00000394114 LTN1O94822 1766 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 SBNO1A3KN83 1393 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 WDR63Q8IWG1 891 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 XIRP1Q702N8 1843 aaKnown RBP7.55□□□□□ -1.2
CASC3-202ENST00000394114 MST1RQ04912 1400 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 MSH6P52701 1360 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 FAM83GA6ND36 823 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 DCTN1Q14203 1278 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 DRC1Q96MC2 740 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 ANP32EQ9BTT0 268 aa7.55□□□□□ -1.2
CASC3-202ENST00000394114 ZNF16P17020 682 aaPredicted RBP7.54□□□□□ -1.2
CASC3-202ENST00000394114 HOXC9P31274 260 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 NFE2L2Q16236 605 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 C8orf37Q96NL8 207 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 CDHR5Q9HBB8 845 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 TCF3P15923 654 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 METTL3Q86U44 580 aaKnown RBP7.54□□□□□ -1.2
CASC3-202ENST00000394114 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 CRBNQ96SW2 442 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 MYH16Q9H6N6 1097 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 FANCIQ9NVI1 1328 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 KIF3CO14782 793 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 ERICH6BQ5W0A0 696 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 RIC3Q7Z5B4 369 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 FRAT1Q92837 279 aaPredicted RBP7.54□□□□□ -1.2
CASC3-202ENST00000394114 CCDC136Q96JN2 1154 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 SPATA32Q96LK8 384 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 EYA1Q99502 592 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 TMEM106CQ9BVX2 250 aa7.54□□□□□ -1.2
CASC3-202ENST00000394114 LMOD1P29536 600 aaPredicted RBP7.53□□□□□ -1.2
CASC3-202ENST00000394114 EXOSC9Q06265 439 aaKnown RBP7.53□□□□□ -1.2
CASC3-202ENST00000394114 CABLES1Q8TDN4 633 aa7.53□□□□□ -1.2
CASC3-202ENST00000394114 GCP02774 474 aa7.53□□□□□ -1.2
CASC3-202ENST00000394114 ZC3H6P61129 1189 aaKnown RBP7.53□□□□□ -1.2
CASC3-202ENST00000394114 MICALL2Q8IY33 904 aa7.53□□□□□ -1.2
CASC3-202ENST00000394114 SREK1Q8WXA9 508 aaKnown RBP7.53□□□□□ -1.2
CASC3-202ENST00000394114 KIF1AQ12756 1690 aa7.52□□□□□ -1.21
CASC3-202ENST00000394114 RGPD1P0DJD0 1748 aa7.52□□□□□ -1.21
CASC3-202ENST00000394114 TRPM3Q9HCF6 1732 aaPredicted RBP7.52□□□□□ -1.21
CASC3-202ENST00000394114 NLRP7Q8WX94 980 aa7.52□□□□□ -1.21
CASC3-202ENST00000394114 UPF1Q92900 1129 aaKnown RBP eCLIP7.52□□□□□ -1.211e-8■■■□□ 18.7
CASC3-202ENST00000394114 NFAT5O94916 1531 aa7.52□□□□□ -1.21
CASC3-202ENST00000394114 MCM10Q7L590 875 aa7.52□□□□□ -1.21
CASC3-202ENST00000394114 GJD4Q96KN9 370 aaPredicted RBP7.52□□□□□ -1.21
CASC3-202ENST00000394114 NDUFB9Q9Y6M9 179 aa7.52□□□□□ -1.21
CASC3-202ENST00000394114 USP54Q70EL1 1684 aa7.52□□□□□ -1.21
CASC3-202ENST00000394114 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
CASC3-202ENST00000394114 SMARCA5O60264 1052 aaPredicted RBP7.51□□□□□ -1.21
CASC3-202ENST00000394114 KCNH5Q8NCM2 988 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 LRRC59Q96AG4 307 aaKnown RBP7.51□□□□□ -1.21
CASC3-202ENST00000394114 RGPD2P0DJD1 1756 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 DCCP43146 1447 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 A0A0U1RQG5 324 aaPredicted RBP7.51□□□□□ -1.21
CASC3-202ENST00000394114 C2orf72A6NCS6 295 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 RARSP54136 660 aaKnown RBP7.51□□□□□ -1.21
CASC3-202ENST00000394114 NOM1Q5C9Z4 860 aaKnown RBP7.51□□□□□ -1.21
CASC3-202ENST00000394114 BRINP3Q76B58 766 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 ZNF710Q8N1W2 664 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.51□□□□□ -1.21
CASC3-202ENST00000394114 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 ALG2Q9H553 416 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 TNNQ9UQP3 1299 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 IGSF1Q8N6C5 1336 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 ARHGEF10O15013 1369 aa7.51□□□□□ -1.21
CASC3-202ENST00000394114 MTHFSDQ2M296 383 aaKnown RBP7.5□□□□□ -1.21
CASC3-202ENST00000394114 PANK1Q8TE04 598 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 IP6K1Q92551 441 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 SLAIN2Q9P270 581 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 NPHP3Q7Z494 1330 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 TCERG1O14776 1098 aaKnown RBP7.5□□□□□ -1.21
CASC3-202ENST00000394114 SPTLC1O15269 473 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 GPR37L1O60883 481 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 OATP04181 439 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 NBPF6Q5VWK0 638 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 NBPF4Q96M43 638 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 RGPD5Q99666 1765 aa7.5□□□□□ -1.21
CASC3-202ENST00000394114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.5□□□□□ -1.21
CASC3-202ENST00000394114 TFIP11Q9UBB9 837 aaKnown RBP7.5□□□□□ -1.21
CASC3-202ENST00000394114 NCOA3Q9Y6Q9 1424 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 IL16Q14005 1332 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 AP1G2O75843 785 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 USP17L8P0C7I0 530 aa7.49□□□□□ -1.21
CASC3-202ENST00000394114 PIP4K2BP78356 416 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms