RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 APBB1O00213 710 aa8.85□□□□□ -0.99
SMAD1-202ENST00000394092 RAB11FIP3O75154 756 aa8.85□□□□□ -0.99
SMAD1-202ENST00000394092 SDSP20132 328 aa8.85□□□□□ -0.99
SMAD1-202ENST00000394092 NECTIN2Q92692 538 aa8.85□□□□□ -0.99
SMAD1-202ENST00000394092 LRRC59Q96AG4 307 aaKnown RBP8.85□□□□□ -0.99
SMAD1-202ENST00000394092 STRCP1A6NGW2 1772 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 COL18A1P39060 1754 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 ERBB3P21860 1342 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 PKD1L3Q7Z443 1732 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 PARP4Q9UKK3 1724 aaKnown RBP8.84□□□□□ -0.99
SMAD1-202ENST00000394092 ERC2O15083 957 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 SMARCA5O60264 1052 aaPredicted RBP8.84□□□□□ -0.99
SMAD1-202ENST00000394092 PDE1AP54750 535 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 HSP90AB4PQ58FF6 505 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 C16orf71Q8IYS4 520 aaPredicted RBP8.84□□□□□ -0.99
SMAD1-202ENST00000394092 DNAAF4Q8WXU2 420 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 KIF2CQ99661 725 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
SMAD1-202ENST00000394092 DBF4Q9UBU7 674 aaPredicted RBP8.84□□□□□ -0.99
SMAD1-202ENST00000394092 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
SMAD1-202ENST00000394092 NPHP3Q7Z494 1330 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 TNS3Q68CZ2 1445 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 ST18O60284 1047 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 EIF2S2P20042 333 aaKnown RBP8.83□□□□□ -1
SMAD1-202ENST00000394092 MX1P20591 662 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 MCM4P33991 863 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 XPCQ01831 940 aaPredicted RBP8.83□□□□□ -1
SMAD1-202ENST00000394092 SPRYD3Q8NCJ5 442 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 IL27Q8NEV9 243 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 SSH3Q8TE77 659 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 RAPGEF4Q8WZA2 1011 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 GBP4Q96PP9 640 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 LGR6Q9HBX8 967 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 EXOC6BQ9Y2D4 811 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 SALL3Q9BXA9 1300 aa8.83□□□□□ -1
SMAD1-202ENST00000394092 TMEM94Q12767 1356 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 ALDH1L1O75891 902 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 POTEIP0CG38 1075 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 MCCP23508 829 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 DDIT3P35638 169 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 MPRIPQ6WCQ1 1025 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 CADPS2Q86UW7 1296 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 OTUD7AQ8TE49 926 aaPredicted RBP8.82□□□□□ -1
SMAD1-202ENST00000394092 USP26Q9BXU7 913 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 USP44Q9H0E7 712 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 PHAXQ9H814 394 aaKnown RBP8.82□□□□□ -1
SMAD1-202ENST00000394092 CHPF2Q9P2E5 772 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 STAP2Q9UGK3 403 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 LAMB4A4D0S4 1761 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 MRC1P22897 1456 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 HEG1Q9ULI3 1381 aa8.82□□□□□ -1
SMAD1-202ENST00000394092 PNMA6EA0A0J9YXQ4 647 aa8.81□□□□□ -1
SMAD1-202ENST00000394092 EPB41L2O43491 1005 aaKnown RBP8.81□□□□□ -1
SMAD1-202ENST00000394092 DDX58O95786 925 aaKnown RBP8.81□□□□□ -1
SMAD1-202ENST00000394092 TATP17735 454 aaPredicted RBP8.81□□□□□ -1
SMAD1-202ENST00000394092 L1TD1Q5T7N2 865 aaKnown RBP8.81□□□□□ -1
SMAD1-202ENST00000394092 CHADLQ6NUI6 762 aa8.81□□□□□ -1
SMAD1-202ENST00000394092 KIF1BPQ96EK5 621 aa8.81□□□□□ -1
SMAD1-202ENST00000394092 HYPKQ9NX55 129 aa8.81□□□□□ -1
SMAD1-202ENST00000394092 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.81□□□□□ -1
SMAD1-202ENST00000394092 SPG7Q9UQ90 795 aa8.81□□□□□ -1
SMAD1-202ENST00000394092 C5P01031 1676 aa8.81□□□□□ -1
SMAD1-202ENST00000394092 BEND3Q5T5X7 828 aa8.81□□□□□ -1
SMAD1-202ENST00000394092 ADCY9O60503 1353 aa8.8□□□□□ -1
SMAD1-202ENST00000394092 PI4KAP2A4QPH2 592 aa8.8□□□□□ -1
SMAD1-202ENST00000394092 GOLGA6L22H0YM25 854 aa8.8□□□□□ -1
SMAD1-202ENST00000394092 GIGYF1O75420 1035 aaPredicted RBP8.8□□□□□ -1
SMAD1-202ENST00000394092 RAB3GAP1Q15042 981 aa8.8□□□□□ -1
SMAD1-202ENST00000394092 PPP1R42Q7Z4L9 355 aa8.8□□□□□ -1
SMAD1-202ENST00000394092 PI4KAP1Q8N8J0 262 aa8.8□□□□□ -1
SMAD1-202ENST00000394092 XIRP1Q702N8 1843 aaKnown RBP8.8□□□□□ -1
SMAD1-202ENST00000394092 SRGAP3O43295 1099 aa8.79□□□□□ -1
SMAD1-202ENST00000394092 MCM2P49736 904 aa8.79□□□□□ -1
SMAD1-202ENST00000394092 ANAPC15P60006 121 aa8.79□□□□□ -1
SMAD1-202ENST00000394092 MTX1Q13505 466 aa8.79□□□□□ -1
SMAD1-202ENST00000394092 KSR2Q6VAB6 950 aa8.79□□□□□ -1
SMAD1-202ENST00000394092 ERC1Q8IUD2 1116 aa8.79□□□□□ -1
SMAD1-202ENST00000394092 ESYT1Q9BSJ8 1104 aa8.79□□□□□ -1
SMAD1-202ENST00000394092 CPDO75976 1380 aa8.79□□□□□ -1
SMAD1-202ENST00000394092 AFDNP55196 1824 aaKnown RBP8.79□□□□□ -1
SMAD1-202ENST00000394092 TRIM6-TRIM34B2RNG4 842 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 SURF6O75683 361 aaKnown RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 ZC3H6P61129 1189 aaKnown RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 NUCB2P80303 420 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 SKOR2Q2VWA4 1001 aaPredicted RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 IFNL2Q8IZJ0 200 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 SLC52A2Q9HAB3 445 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 CWC22Q9HCG8 908 aaKnown RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 DDX21Q9NR30 783 aaKnown RBP eCLIP8.78□□□□□ -17e-6■■■■■ 43.5
SMAD1-202ENST00000394092 NLRP2Q9NX02 1062 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 C9orf78Q9NZ63 289 aaPredicted RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 ISY1Q9ULR0 285 aaKnown RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 AXIN2Q9Y2T1 843 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 MEGF6O75095 1541 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 KDM6AO15550 1401 aaPredicted RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 KCNQ3O43525 872 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 CD2BP2O95400 341 aaKnown RBP8.78□□□□□ -1
SMAD1-202ENST00000394092 CSB-PGBD3P0DP91 1061 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 CNTROBQ8N137 903 aa8.78□□□□□ -1
SMAD1-202ENST00000394092 RHPN1Q8TCX5 695 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms