RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 CAVIN1Q6NZI2 390 aaKnown RBP16.83■□□□□ 0.28
CCDC142-202ENST00000393965 SOS1Q07889 1333 aaPredicted RBP16.83■□□□□ 0.28
CCDC142-202ENST00000393965 ADCY9O60503 1353 aa16.82■□□□□ 0.28
CCDC142-202ENST00000393965 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
CCDC142-202ENST00000393965 IBTKQ9P2D0 1353 aaPredicted RBP16.82■□□□□ 0.28
CCDC142-202ENST00000393965 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
CCDC142-202ENST00000393965 GNAI3P08754 354 aa16.82■□□□□ 0.28
CCDC142-202ENST00000393965 N4BP2Q86UW6 1770 aaPredicted RBP16.82■□□□□ 0.28
CCDC142-202ENST00000393965 PLCB2Q00722 1185 aa16.82■□□□□ 0.28
CCDC142-202ENST00000393965 CHRNA2Q15822 529 aa16.82■□□□□ 0.28
CCDC142-202ENST00000393965 GBP4Q96PP9 640 aa16.82■□□□□ 0.28
CCDC142-202ENST00000393965 MX1P20591 662 aa16.81■□□□□ 0.28
CCDC142-202ENST00000393965 RBM10P98175 930 aaKnown RBP16.81■□□□□ 0.28
CCDC142-202ENST00000393965 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
CCDC142-202ENST00000393965 BEND3Q5T5X7 828 aa16.81■□□□□ 0.28
CCDC142-202ENST00000393965 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
CCDC142-202ENST00000393965 PALD1Q9ULE6 856 aa16.81■□□□□ 0.28
CCDC142-202ENST00000393965 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
CCDC142-202ENST00000393965 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
CCDC142-202ENST00000393965 ZGPATQ8N5A5 531 aaKnown RBP16.8■□□□□ 0.28
CCDC142-202ENST00000393965 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
CCDC142-202ENST00000393965 SRCIN1Q9C0H9 1055 aa16.8■□□□□ 0.28
CCDC142-202ENST00000393965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.8■□□□□ 0.28
CCDC142-202ENST00000393965 SLIT3O75094 1523 aa16.8■□□□□ 0.28
CCDC142-202ENST00000393965 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
CCDC142-202ENST00000393965 SURF6O75683 361 aaKnown RBP16.8■□□□□ 0.28
CCDC142-202ENST00000393965 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
CCDC142-202ENST00000393965 RBM27Q9P2N5 1060 aaKnown RBP16.8■□□□□ 0.28
CCDC142-202ENST00000393965 SRGAP3O43295 1099 aa16.79■□□□□ 0.28
CCDC142-202ENST00000393965 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
CCDC142-202ENST00000393965 OSBPL3Q9H4L5 887 aa16.79■□□□□ 0.28
CCDC142-202ENST00000393965 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
CCDC142-202ENST00000393965 DDX11L8A8MPP1 907 aa16.79■□□□□ 0.28
CCDC142-202ENST00000393965 GOLGA6L22H0YM25 854 aa16.79■□□□□ 0.28
CCDC142-202ENST00000393965 RAB3GAP1Q15042 981 aa16.79■□□□□ 0.28
CCDC142-202ENST00000393965 C1orf141Q5JVX7 400 aa16.79■□□□□ 0.28
CCDC142-202ENST00000393965 PA2G4Q9UQ80 394 aaKnown RBP16.78■□□□□ 0.28
CCDC142-202ENST00000393965 MAP3K2Q9Y2U5 619 aa16.78■□□□□ 0.28
CCDC142-202ENST00000393965 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
CCDC142-202ENST00000393965 MRE11P49959 708 aa16.78■□□□□ 0.28
CCDC142-202ENST00000393965 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
CCDC142-202ENST00000393965 ESPNB1AK53 854 aa16.77■□□□□ 0.28
CCDC142-202ENST00000393965 PRPF40AO75400 957 aaKnown RBP16.77■□□□□ 0.28
CCDC142-202ENST00000393965 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
CCDC142-202ENST00000393965 SSH3Q8TE77 659 aa16.77■□□□□ 0.28
CCDC142-202ENST00000393965 ERBB3P21860 1342 aa16.77■□□□□ 0.27
CCDC142-202ENST00000393965 ERC2O15083 957 aa16.77■□□□□ 0.27
CCDC142-202ENST00000393965 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.27
CCDC142-202ENST00000393965 NLRP2Q9NX02 1062 aa16.77■□□□□ 0.27
CCDC142-202ENST00000393965 BABAM1Q9NWV8 329 aa16.76■□□□□ 0.27
CCDC142-202ENST00000393965 ATF3P18847 181 aa16.76■□□□□ 0.27
CCDC142-202ENST00000393965 TMEM94Q12767 1356 aa16.76■□□□□ 0.27
CCDC142-202ENST00000393965 CHMLP26374 656 aa16.75■□□□□ 0.27
CCDC142-202ENST00000393965 ESYT1Q9BSJ8 1104 aa16.75■□□□□ 0.27
CCDC142-202ENST00000393965 BCL11BQ9C0K0 894 aaPredicted RBP16.75■□□□□ 0.27
CCDC142-202ENST00000393965 C19orf44Q9H6X5 657 aa16.75■□□□□ 0.27
CCDC142-202ENST00000393965 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
CCDC142-202ENST00000393965 PXDNLA1KZ92 1463 aa16.75■□□□□ 0.27
CCDC142-202ENST00000393965 POLA2Q14181 598 aa16.75■□□□□ 0.27
CCDC142-202ENST00000393965 RABEP1Q15276 862 aa16.75■□□□□ 0.27
CCDC142-202ENST00000393965 MYL6BP14649 208 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 C5P01031 1676 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 ALS2Q96Q42 1657 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 NFATC2IPQ8NCF5 419 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 GDPD2Q9HCC8 539 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 MEGF6O75095 1541 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 NCAPD2Q15021 1401 aa16.74■□□□□ 0.27
CCDC142-202ENST00000393965 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
CCDC142-202ENST00000393965 KDM6AO15550 1401 aaPredicted RBP16.73■□□□□ 0.27
CCDC142-202ENST00000393965 PDIA6Q15084 440 aa16.73■□□□□ 0.27
CCDC142-202ENST00000393965 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
CCDC142-202ENST00000393965 KLHDC4Q8TBB5 520 aa16.73■□□□□ 0.27
CCDC142-202ENST00000393965 PI4K2BQ8TCG2 481 aa16.73■□□□□ 0.27
CCDC142-202ENST00000393965 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
CCDC142-202ENST00000393965 MST1RQ04912 1400 aa16.72■□□□□ 0.27
CCDC142-202ENST00000393965 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
CCDC142-202ENST00000393965 KAZALD1Q96I82 304 aa16.72■□□□□ 0.27
CCDC142-202ENST00000393965 UPF3BQ9BZI7 483 aaKnown RBP16.72■□□□□ 0.27
CCDC142-202ENST00000393965 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
CCDC142-202ENST00000393965 DBF4Q9UBU7 674 aaPredicted RBP16.71■□□□□ 0.27
CCDC142-202ENST00000393965 NEK4P51957 841 aa16.71■□□□□ 0.27
CCDC142-202ENST00000393965 STAP2Q9UGK3 403 aa16.71■□□□□ 0.27
CCDC142-202ENST00000393965 REC8O95072 547 aa16.71■□□□□ 0.27
CCDC142-202ENST00000393965 DDX54Q8TDD1 881 aaKnown RBP16.71■□□□□ 0.27
CCDC142-202ENST00000393965 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.27
CCDC142-202ENST00000393965 PTMAP06454 111 aaKnown RBP16.7■□□□□ 0.26
CCDC142-202ENST00000393965 MSNP26038 577 aaKnown RBP16.7■□□□□ 0.26
CCDC142-202ENST00000393965 FAM13BQ9NYF5 915 aa16.7■□□□□ 0.26
CCDC142-202ENST00000393965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
CCDC142-202ENST00000393965 SUCLG2Q96I99 432 aa16.7■□□□□ 0.26
CCDC142-202ENST00000393965 ZDHHC9Q9Y397 364 aa16.7■□□□□ 0.26
CCDC142-202ENST00000393965 C9orf78Q9NZ63 289 aaPredicted RBP16.69■□□□□ 0.26
CCDC142-202ENST00000393965 USP16Q9Y5T5 823 aa16.69■□□□□ 0.26
CCDC142-202ENST00000393965 CRYBG1Q9Y4K1 1723 aa16.69■□□□□ 0.26
CCDC142-202ENST00000393965 R3HCC1Q9Y3T6 440 aaKnown RBP16.69■□□□□ 0.26
CCDC142-202ENST00000393965 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
CCDC142-202ENST00000393965 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
CCDC142-202ENST00000393965 FSD2A1L4K1 749 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms