RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 PROSER3Q2NL68 480 aa23.63■■□□□ 1.37
ERCC2-203ENST00000391944 KSR2Q6VAB6 950 aa23.62■■□□□ 1.37
ERCC2-203ENST00000391944 PRDM11Q9NQV5 511 aa23.62■■□□□ 1.37
ERCC2-203ENST00000391944 DDX21Q9NR30 783 aaKnown RBP eCLIP23.62■■□□□ 1.37
ERCC2-203ENST00000391944 HSP90AB1P08238 724 aaKnown RBP23.61■■□□□ 1.37
ERCC2-203ENST00000391944 SDSP20132 328 aa23.61■■□□□ 1.37
ERCC2-203ENST00000391944 SLC39A6Q13433 755 aa23.61■■□□□ 1.37
ERCC2-203ENST00000391944 NBPF7P0C2Y1 421 aaPredicted RBP23.61■■□□□ 1.37
ERCC2-203ENST00000391944 PDE1AP54750 535 aa23.61■■□□□ 1.37
ERCC2-203ENST00000391944 NFKBIBQ15653 356 aa23.61■■□□□ 1.37
ERCC2-203ENST00000391944 MRC1P22897 1456 aa23.61■■□□□ 1.37
ERCC2-203ENST00000391944 WDR17Q8IZU2 1322 aa23.6■■□□□ 1.37
ERCC2-203ENST00000391944 SALL3Q9BXA9 1300 aa23.6■■□□□ 1.37
ERCC2-203ENST00000391944 POLA2Q14181 598 aa23.6■■□□□ 1.37
ERCC2-203ENST00000391944 MAP3K2Q9Y2U5 619 aa23.6■■□□□ 1.37
ERCC2-203ENST00000391944 ALDH1L1O75891 902 aa23.59■■□□□ 1.37
ERCC2-203ENST00000391944 PDIA6Q15084 440 aa23.59■■□□□ 1.37
ERCC2-203ENST00000391944 PPP1R42Q7Z4L9 355 aa23.59■■□□□ 1.37
ERCC2-203ENST00000391944 ANTXR1Q9H6X2 564 aa23.58■■□□□ 1.37
ERCC2-203ENST00000391944 KIF2CQ99661 725 aa23.57■■□□□ 1.36
ERCC2-203ENST00000391944 C5P01031 1676 aa23.56■■□□□ 1.36
ERCC2-203ENST00000391944 RAB11FIP3O75154 756 aa23.56■■□□□ 1.36
ERCC2-203ENST00000391944 DDX58O95786 925 aaKnown RBP23.56■■□□□ 1.36
ERCC2-203ENST00000391944 SNX21Q969T3 373 aa23.56■■□□□ 1.36
ERCC2-203ENST00000391944 ZNF496Q96IT1 587 aaPredicted RBP23.56■■□□□ 1.36
ERCC2-203ENST00000391944 TOM1L2Q6ZVM7 507 aa23.55■■□□□ 1.36
ERCC2-203ENST00000391944 SLKQ9H2G2 1235 aaPredicted RBP23.55■■□□□ 1.36
ERCC2-203ENST00000391944 COL5A2P05997 1499 aaPredicted RBP23.55■■□□□ 1.36
ERCC2-203ENST00000391944 CASC1Q6TDU7 716 aa23.55■■□□□ 1.36
ERCC2-203ENST00000391944 SRGAP3O43295 1099 aa23.54■■□□□ 1.36
ERCC2-203ENST00000391944 STAP2Q9UGK3 403 aa23.54■■□□□ 1.36
ERCC2-203ENST00000391944 ABCA3Q99758 1704 aa23.54■■□□□ 1.36
ERCC2-203ENST00000391944 PARP4Q9UKK3 1724 aaKnown RBP23.54■■□□□ 1.36
ERCC2-203ENST00000391944 MX1P20591 662 aa23.54■■□□□ 1.36
ERCC2-203ENST00000391944 HSCBQ8IWL3 235 aa23.54■■□□□ 1.36
ERCC2-203ENST00000391944 TTC5Q8N0Z6 440 aa23.54■■□□□ 1.36
ERCC2-203ENST00000391944 LINS1Q8NG48 757 aa23.54■■□□□ 1.36
ERCC2-203ENST00000391944 SURF6O75683 361 aaKnown RBP23.53■■□□□ 1.36
ERCC2-203ENST00000391944 SNRPA1P09661 255 aaKnown RBP23.53■■□□□ 1.36
ERCC2-203ENST00000391944 CABP4P57796 275 aa23.53■■□□□ 1.36
ERCC2-203ENST00000391944 HDAC5Q9UQL6 1122 aa23.53■■□□□ 1.36
ERCC2-203ENST00000391944 NHSL1Q5SYE7 1610 aa23.53■■□□□ 1.36
ERCC2-203ENST00000391944 MTX1Q13505 466 aa23.53■■□□□ 1.36
ERCC2-203ENST00000391944 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
ERCC2-203ENST00000391944 C9orf78Q9NZ63 289 aaPredicted RBP23.53■■□□□ 1.36
ERCC2-203ENST00000391944 FMNL2Q96PY5 1086 aa23.52■■□□□ 1.36
ERCC2-203ENST00000391944 CARD10Q9BWT7 1032 aa23.51■■□□□ 1.35
ERCC2-203ENST00000391944 AIMP1Q12904 312 aaKnown RBP23.51■■□□□ 1.35
ERCC2-203ENST00000391944 PCDH11XQ9BZA7 1347 aa23.51■■□□□ 1.35
ERCC2-203ENST00000391944 PCDH11YQ9BZA8 1340 aa23.51■■□□□ 1.35
ERCC2-203ENST00000391944 TUBGCP6Q96RT7 1819 aa23.5■■□□□ 1.35
ERCC2-203ENST00000391944 CWF19L2Q2TBE0 894 aaKnown RBP23.5■■□□□ 1.35
ERCC2-203ENST00000391944 USP26Q9BXU7 913 aa23.5■■□□□ 1.35
ERCC2-203ENST00000391944 UTYO14607 1347 aa23.49■■□□□ 1.35
ERCC2-203ENST00000391944 AOX1Q06278 1338 aa23.49■■□□□ 1.35
ERCC2-203ENST00000391944 LARP1Q6PKG0 1096 aaKnown RBP23.49■■□□□ 1.35
ERCC2-203ENST00000391944 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
ERCC2-203ENST00000391944 HSP90AB4PQ58FF6 505 aa23.49■■□□□ 1.35
ERCC2-203ENST00000391944 RHPN1Q8TCX5 695 aa23.49■■□□□ 1.35
ERCC2-203ENST00000391944 KIF1BPQ96EK5 621 aa23.49■■□□□ 1.35
ERCC2-203ENST00000391944 MYL6BP14649 208 aa23.48■■□□□ 1.35
ERCC2-203ENST00000391944 RIC3Q7Z5B4 369 aa23.48■■□□□ 1.35
ERCC2-203ENST00000391944 IL1RAPL2Q9NP60 686 aa23.48■■□□□ 1.35
ERCC2-203ENST00000391944 GRM8O00222 908 aa23.48■■□□□ 1.35
ERCC2-203ENST00000391944 FRAT2O75474 233 aaPredicted RBP23.48■■□□□ 1.35
ERCC2-203ENST00000391944 DEKP35659 375 aaKnown RBP23.48■■□□□ 1.35
ERCC2-203ENST00000391944 TSHZ3Q63HK5 1081 aa23.48■■□□□ 1.35
ERCC2-203ENST00000391944 LRP10Q7Z4F1 713 aa23.48■■□□□ 1.35
ERCC2-203ENST00000391944 IL2RBP14784 551 aa23.47■■□□□ 1.35
ERCC2-203ENST00000391944 XAGE3Q8WTP9 111 aa23.47■■□□□ 1.35
ERCC2-203ENST00000391944 NKX1-1Q15270 411 aaPredicted RBP23.47■■□□□ 1.35
ERCC2-203ENST00000391944 COPS6Q7L5N1 327 aa23.47■■□□□ 1.35
ERCC2-203ENST00000391944 ERVV-2B6SEH9 535 aa23.46■■□□□ 1.35
ERCC2-203ENST00000391944 REC8O95072 547 aa23.46■■□□□ 1.35
ERCC2-203ENST00000391944 ERC2O15083 957 aa23.45■■□□□ 1.35
ERCC2-203ENST00000391944 IGKV5-2P06315 115 aa23.45■■□□□ 1.35
ERCC2-203ENST00000391944 SPRYD3Q8NCJ5 442 aa23.45■■□□□ 1.35
ERCC2-203ENST00000391944 EVA1CP58658 441 aa23.45■■□□□ 1.34
ERCC2-203ENST00000391944 NEXNQ0ZGT2 675 aa23.44■■□□□ 1.34
ERCC2-203ENST00000391944 METTL22Q9BUU2 404 aaPredicted RBP23.44■■□□□ 1.34
ERCC2-203ENST00000391944 STRN4Q9NRL3 753 aa23.44■■□□□ 1.34
ERCC2-203ENST00000391944 ANKRD13DQ6ZTN6 518 aa23.43■■□□□ 1.34
ERCC2-203ENST00000391944 GLI3P10071 1580 aa23.43■■□□□ 1.34
ERCC2-203ENST00000391944 NUTM1Q86Y26 1132 aa23.43■■□□□ 1.34
ERCC2-203ENST00000391944 KAZALD1Q96I82 304 aa23.43■■□□□ 1.34
ERCC2-203ENST00000391944 RBM42Q9BTD8 480 aaKnown RBP23.43■■□□□ 1.34
ERCC2-203ENST00000391944 NEURL1BA8MQ27 555 aa23.42■■□□□ 1.34
ERCC2-203ENST00000391944 SUCLG2Q96I99 432 aa23.42■■□□□ 1.34
ERCC2-203ENST00000391944 CHMP5Q9NZZ3 219 aa23.42■■□□□ 1.34
ERCC2-203ENST00000391944 RABEP1Q15276 862 aa23.42■■□□□ 1.34
ERCC2-203ENST00000391944 LAMB4A4D0S4 1761 aa23.41■■□□□ 1.34
ERCC2-203ENST00000391944 TRIM6-TRIM34B2RNG4 842 aa23.41■■□□□ 1.34
ERCC2-203ENST00000391944 SHANK3Q9BYB0 1731 aa23.4■■□□□ 1.34
ERCC2-203ENST00000391944 CD2BP2O95400 341 aaKnown RBP23.4■■□□□ 1.34
ERCC2-203ENST00000391944 GCKRQ14397 625 aa23.4■■□□□ 1.34
ERCC2-203ENST00000391944 RILPL2Q969X0 211 aa23.4■■□□□ 1.34
ERCC2-203ENST00000391944 CHMLP26374 656 aa23.39■■□□□ 1.34
ERCC2-203ENST00000391944 MYD88Q99836 296 aa23.39■■□□□ 1.34
ERCC2-203ENST00000391944 ESYT1Q9BSJ8 1104 aa23.39■■□□□ 1.34
ERCC2-203ENST00000391944 BICC1Q9H694 974 aaKnown RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms