RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 MAP4K4O95819 1239 aaPredicted RBP22.63■■□□□ 1.21
PPFIA1-202ENST00000389547 GAS2L3Q86XJ1 694 aa22.63■■□□□ 1.21
PPFIA1-202ENST00000389547 IQGAP1P46940 1657 aa22.62■■□□□ 1.21
PPFIA1-202ENST00000389547 PIK3R4Q99570 1358 aa22.62■■□□□ 1.21
PPFIA1-202ENST00000389547 ZRSR1Q15695 479 aaKnown RBP22.62■■□□□ 1.21
PPFIA1-202ENST00000389547 BTG4Q9NY30 223 aa22.62■■□□□ 1.21
PPFIA1-202ENST00000389547 CCDC66A2RUB6 948 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 RBM27Q9P2N5 1060 aaKnown RBP22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 ATP5J2-PTCD1G3V325 749 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 BAG4O95429 457 aaKnown RBP22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 KLHL40Q2TBA0 621 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 MYD88Q99836 296 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 PTPRUQ92729 1446 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 PTPRCP08575 1304 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 EXOC5O00471 708 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 ARHGAP45Q92619 1136 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 MAP3K2Q9Y2U5 619 aa22.61■■□□□ 1.21
PPFIA1-202ENST00000389547 KCNQ3O43525 872 aa22.6■■□□□ 1.21
PPFIA1-202ENST00000389547 SPATA31D1Q6ZQQ2 1576 aa22.6■■□□□ 1.21
PPFIA1-202ENST00000389547 MBD3O95983 291 aa22.6■■□□□ 1.21
PPFIA1-202ENST00000389547 FMNL2Q96PY5 1086 aa22.6■■□□□ 1.21
PPFIA1-202ENST00000389547 CCDC94Q9BW85 323 aaPredicted RBP22.6■■□□□ 1.21
PPFIA1-202ENST00000389547 LMTK3Q96Q04 1460 aa22.6■■□□□ 1.21
PPFIA1-202ENST00000389547 RNMTO43148 476 aaKnown RBP22.6■■□□□ 1.21
PPFIA1-202ENST00000389547 ARHGEF25Q86VW2 580 aa22.6■■□□□ 1.21
PPFIA1-202ENST00000389547 HTATSF1O43719 755 aaKnown RBP22.59■■□□□ 1.21
PPFIA1-202ENST00000389547 SPC24Q8NBT2 197 aa22.59■■□□□ 1.21
PPFIA1-202ENST00000389547 ZBTB3Q9H5J0 574 aa22.59■■□□□ 1.21
PPFIA1-202ENST00000389547 ZKSCAN5Q9Y2L8 839 aa22.59■■□□□ 1.21
PPFIA1-202ENST00000389547 HSP90AB4PQ58FF6 505 aa22.59■■□□□ 1.21
PPFIA1-202ENST00000389547 PLCD3Q8N3E9 789 aa22.58■■□□□ 1.21
PPFIA1-202ENST00000389547 ERICH4A6NGS2 130 aa22.58■■□□□ 1.21
PPFIA1-202ENST00000389547 CDC45O75419 566 aa22.58■■□□□ 1.21
PPFIA1-202ENST00000389547 ZBTB40Q9NUA8 1239 aa22.58■■□□□ 1.21
PPFIA1-202ENST00000389547 NUTM1Q86Y26 1132 aa22.58■■□□□ 1.2
PPFIA1-202ENST00000389547 TSHZ3Q63HK5 1081 aa22.57■■□□□ 1.2
PPFIA1-202ENST00000389547 PPLO60437 1756 aa22.57■■□□□ 1.2
PPFIA1-202ENST00000389547 ZSCAN23Q3MJ62 389 aa22.57■■□□□ 1.2
PPFIA1-202ENST00000389547 INTS3Q68E01 1043 aaKnown RBP22.56■■□□□ 1.2
PPFIA1-202ENST00000389547 TOM1O60784 492 aa22.56■■□□□ 1.2
PPFIA1-202ENST00000389547 ZNF830Q96NB3 372 aaPredicted RBP22.56■■□□□ 1.2
PPFIA1-202ENST00000389547 ANTXR1Q9H6X2 564 aa22.56■■□□□ 1.2
PPFIA1-202ENST00000389547 KIF6Q6ZMV9 814 aa22.55■■□□□ 1.2
PPFIA1-202ENST00000389547 COPS6Q7L5N1 327 aa22.55■■□□□ 1.2
PPFIA1-202ENST00000389547 REC8O95072 547 aa22.55■■□□□ 1.2
PPFIA1-202ENST00000389547 IL2RBP14784 551 aa22.55■■□□□ 1.2
PPFIA1-202ENST00000389547 TRERF1Q96PN7 1200 aa22.55■■□□□ 1.2
PPFIA1-202ENST00000389547 RABEP1Q15276 862 aa22.55■■□□□ 1.2
PPFIA1-202ENST00000389547 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 ACSBG1Q96GR2 724 aa22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 IGSF1Q8N6C5 1336 aa22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 NRDCO43847 1150 aa22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 PRIM1P49642 420 aaKnown RBP22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 LARP1Q6PKG0 1096 aaKnown RBP22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 XAGE3Q8WTP9 111 aa22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 AXIN2Q9Y2T1 843 aa22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 VGLL3A8MV65 326 aa22.54■■□□□ 1.2
PPFIA1-202ENST00000389547 KIAA1210Q9ULL0 1709 aa22.53■■□□□ 1.2
PPFIA1-202ENST00000389547 SNRPA1P09661 255 aaKnown RBP22.53■■□□□ 1.2
PPFIA1-202ENST00000389547 TSC1Q92574 1164 aa22.53■■□□□ 1.2
PPFIA1-202ENST00000389547 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
PPFIA1-202ENST00000389547 ZBTB7BO15156 539 aaPredicted RBP22.53■■□□□ 1.2
PPFIA1-202ENST00000389547 ARHGEF10O15013 1369 aa22.52■■□□□ 1.2
PPFIA1-202ENST00000389547 MCM5P33992 734 aa22.52■■□□□ 1.2
PPFIA1-202ENST00000389547 C8orf37Q96NL8 207 aa22.52■■□□□ 1.2
PPFIA1-202ENST00000389547 C16orf71Q8IYS4 520 aaPredicted RBP22.52■■□□□ 1.2
PPFIA1-202ENST00000389547 KIAA0232Q92628 1395 aa22.52■■□□□ 1.2
PPFIA1-202ENST00000389547 SIGLEC1Q9BZZ2 1709 aa22.51■■□□□ 1.19
PPFIA1-202ENST00000389547 CWF19L2Q2TBE0 894 aaKnown RBP22.51■■□□□ 1.19
PPFIA1-202ENST00000389547 TAF3Q5VWG9 929 aa22.51■■□□□ 1.19
PPFIA1-202ENST00000389547 PPP1R42Q7Z4L9 355 aa22.51■■□□□ 1.19
PPFIA1-202ENST00000389547 RAB3GAP1Q15042 981 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 NOL7Q9UMY1 257 aaKnown RBP22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 CPS1P31327 1500 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 A0A087WZG4 1122 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 STARD3NLO95772 234 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 GPTP24298 496 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 HDAC1Q13547 482 aaPredicted RBP22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 ERC2O15083 957 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 LETM1O95202 739 aaPredicted RBP22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 NEK4P51957 841 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 UBE3BQ7Z3V4 1068 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 USP25Q9UHP3 1055 aa22.5■■□□□ 1.19
PPFIA1-202ENST00000389547 ANKRD13DQ6ZTN6 518 aa22.49■■□□□ 1.19
PPFIA1-202ENST00000389547 AACSQ86V21 672 aa22.49■■□□□ 1.19
PPFIA1-202ENST00000389547 ZNF790Q6PG37 636 aa22.49■■□□□ 1.19
PPFIA1-202ENST00000389547 DCAF5Q96JK2 942 aa22.49■■□□□ 1.19
PPFIA1-202ENST00000389547 DNAJC2Q99543 621 aaKnown RBP22.49■■□□□ 1.19
PPFIA1-202ENST00000389547 GTPBP4Q9BZE4 634 aaKnown RBP22.48■■□□□ 1.19
PPFIA1-202ENST00000389547 ADGRL3Q9HAR2 1447 aa22.48■■□□□ 1.19
PPFIA1-202ENST00000389547 POLR1AO95602 1720 aaPredicted RBP22.48■■□□□ 1.19
PPFIA1-202ENST00000389547 RBSNQ9H1K0 784 aa22.47■■□□□ 1.19
PPFIA1-202ENST00000389547 MYO5BQ9ULV0 1848 aa22.47■■□□□ 1.19
PPFIA1-202ENST00000389547 TERF1P54274 439 aa22.47■■□□□ 1.19
PPFIA1-202ENST00000389547 BICDL1Q6ZP65 573 aa22.47■■□□□ 1.19
PPFIA1-202ENST00000389547 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
PPFIA1-202ENST00000389547 USP19O94966 1318 aa22.46■■□□□ 1.19
PPFIA1-202ENST00000389547 PNPLA6Q8IY17 1366 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms