RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TDO2P48775 406 aa15.67■□□□□ 0.1
PTPRN2-202ENST00000389416 SKOR2Q2VWA4 1001 aaPredicted RBP15.67■□□□□ 0.1
PTPRN2-202ENST00000389416 BLOC1S2Q6QNY1 142 aa15.67■□□□□ 0.1
PTPRN2-202ENST00000389416 MCM2P49736 904 aa15.67■□□□□ 0.1
PTPRN2-202ENST00000389416 JAKMIP1Q96N16 626 aaKnown RBP15.67■□□□□ 0.1
PTPRN2-202ENST00000389416 PHAXQ9H814 394 aaKnown RBP15.67■□□□□ 0.1
PTPRN2-202ENST00000389416 SNRKQ9NRH2 765 aa15.67■□□□□ 0.1
PTPRN2-202ENST00000389416 CWF19L2Q2TBE0 894 aaKnown RBP15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 CAVIN4Q5BKX8 364 aa15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 ABCC3O15438 1527 aa15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 KIAA2012Q0VF49 1180 aa15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 AIDAQ96BJ3 306 aa15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 CLASP1Q7Z460 1538 aa15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 GRM8O00222 908 aa15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 NPHP4O75161 1426 aaPredicted RBP15.66■□□□□ 0.1
PTPRN2-202ENST00000389416 SMARCC1Q92922 1105 aaPredicted RBP15.65■□□□□ 0.1
PTPRN2-202ENST00000389416 PES1O00541 588 aaKnown RBP15.65■□□□□ 0.1
PTPRN2-202ENST00000389416 LMBR1LQ6UX01 489 aa15.65■□□□□ 0.1
PTPRN2-202ENST00000389416 PCDH11XQ9BZA7 1347 aa15.65■□□□□ 0.1
PTPRN2-202ENST00000389416 PCDH11YQ9BZA8 1340 aa15.65■□□□□ 0.1
PTPRN2-202ENST00000389416 ADCY10Q96PN6 1610 aa15.65■□□□□ 0.1
PTPRN2-202ENST00000389416 BECN2A8MW95 431 aa15.65■□□□□ 0.1
PTPRN2-202ENST00000389416 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
PTPRN2-202ENST00000389416 ZNF790Q6PG37 636 aa15.64■□□□□ 0.09
PTPRN2-202ENST00000389416 NBPF5PQ86XG9 351 aaPredicted RBP15.64■□□□□ 0.09
PTPRN2-202ENST00000389416 ECHDC1Q9NTX5 307 aa15.64■□□□□ 0.09
PTPRN2-202ENST00000389416 G2E3Q7L622 706 aa15.64■□□□□ 0.09
PTPRN2-202ENST00000389416 LINS1Q8NG48 757 aa15.64■□□□□ 0.09
PTPRN2-202ENST00000389416 ZSCAN29Q8IWY8 852 aaPredicted RBP15.64■□□□□ 0.09
PTPRN2-202ENST00000389416 PRR36Q9H6K5 1346 aa15.64■□□□□ 0.09
PTPRN2-202ENST00000389416 ARHGEF10O15013 1369 aa15.63■□□□□ 0.09
PTPRN2-202ENST00000389416 CTNNA3Q9UI47 895 aa15.63■□□□□ 0.09
PTPRN2-202ENST00000389416 ARAP3Q8WWN8 1544 aa15.63■□□□□ 0.09
PTPRN2-202ENST00000389416 RHPN1Q8TCX5 695 aa15.63■□□□□ 0.09
PTPRN2-202ENST00000389416 NFKBIBQ15653 356 aa15.63■□□□□ 0.09
PTPRN2-202ENST00000389416 C6orf229H3BNL8 230 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 ALDH1L1O75891 902 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 XBP1P17861 261 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 TCEAL9Q9UHQ7 104 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 NIP7Q9Y221 180 aaKnown RBP eCLIP15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 NLRP1Q9C000 1473 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 SLC5A1P13866 664 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 TPD52L1Q16890 204 aaPredicted RBP15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 FAM98CQ17RN3 349 aaKnown RBP15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 DZIP3Q86Y13 1208 aaKnown RBP15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 NUP133Q8WUM0 1156 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 CDC5LQ99459 802 aaKnown RBP15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 GOLGA6L19H0YKK7 550 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 PDCP20941 246 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 PRPF40BQ6NWY9 871 aaKnown RBP15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 ANKRD44Q8N8A2 993 aa15.62■□□□□ 0.09
PTPRN2-202ENST00000389416 K7ELQ4 463 aaPredicted RBP15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 CHL1O00533 1208 aa15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 DDX46Q7L014 1031 aaKnown RBP15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 MYOM2P54296 1465 aa15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 GOLIM4O00461 696 aa15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 PA2G4Q9UQ80 394 aaKnown RBP15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 DDX21Q9NR30 783 aaKnown RBP eCLIP15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 PDRG1Q9NUG6 133 aa15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 CCDC73Q6ZRK6 1079 aa15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 SETDB2Q96T68 719 aa15.61■□□□□ 0.09
PTPRN2-202ENST00000389416 ZNF335Q9H4Z2 1342 aaPredicted RBP15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 MINDY4BA8MYZ0 360 aa15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 CASTP20810 708 aaKnown RBP15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 CEBPZQ03701 1054 aaKnown RBP15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 GSE1Q14687 1217 aa15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 HDAC1Q13547 482 aaPredicted RBP15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 ANKRD1Q15327 319 aa15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 BRMS1Q9HCU9 246 aa15.6■□□□□ 0.09
PTPRN2-202ENST00000389416 FIBPO43427 364 aa15.59■□□□□ 0.09
PTPRN2-202ENST00000389416 MAP3K12Q12852 859 aa15.59■□□□□ 0.09
PTPRN2-202ENST00000389416 UBAC1Q9BSL1 405 aa15.59■□□□□ 0.09
PTPRN2-202ENST00000389416 ARHGAP31Q2M1Z3 1444 aa15.59■□□□□ 0.09
PTPRN2-202ENST00000389416 ATP8B2P98198 1209 aa15.59■□□□□ 0.09
PTPRN2-202ENST00000389416 IMMTQ16891 758 aaKnown RBP15.59■□□□□ 0.09
PTPRN2-202ENST00000389416 CCDC69A6NI79 296 aa15.58■□□□□ 0.08
PTPRN2-202ENST00000389416 A1BGP04217 495 aa15.58■□□□□ 0.08
PTPRN2-202ENST00000389416 KRT32Q14532 448 aa15.58■□□□□ 0.08
PTPRN2-202ENST00000389416 DZIP1Q86YF9 867 aaKnown RBP15.58■□□□□ 0.08
PTPRN2-202ENST00000389416 PLXNC1O60486 1568 aa15.58■□□□□ 0.08
PTPRN2-202ENST00000389416 ZNF496Q96IT1 587 aaPredicted RBP15.58■□□□□ 0.08
PTPRN2-202ENST00000389416 C16orf71Q8IYS4 520 aaPredicted RBP15.58■□□□□ 0.08
PTPRN2-202ENST00000389416 ZNF622Q969S3 477 aaKnown RBP eCLIP15.58■□□□□ 0.08
PTPRN2-202ENST00000389416 BMP2KLQ5H9B9 411 aa15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 SLC52A2Q9HAB3 445 aa15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 IQSEC3Q9UPP2 1182 aaPredicted RBP15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 CCDC152Q4G0S7 254 aa15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 NAPBQ9H115 298 aa15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 RTCBQ9Y3I0 505 aaKnown RBP15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 TBC1D9Q6ZT07 1266 aa15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 NLRP3Q96P20 1036 aa15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 SDF4Q9BRK5 362 aa15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
PTPRN2-202ENST00000389416 LARP1BQ659C4 914 aaKnown RBP15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 NUCB1Q02818 461 aa15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 TRIM22Q8IYM9 498 aa15.56■□□□□ 0.08
PTPRN2-202ENST00000389416 CWC22Q9HCG8 908 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms