RNA–Protein interactions for RNA: ENST00000382194.6

SMARCA2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-208ENST00000382194 MAP4K4O95819 1239 aaPredicted RBP16.19■□□□□ 0.18
SMARCA2-208ENST00000382194 TAF3Q5VWG9 929 aa16.19■□□□□ 0.18
SMARCA2-208ENST00000382194 CLEC11AQ9Y240 323 aa16.19■□□□□ 0.18
SMARCA2-208ENST00000382194 K7ELQ4 463 aaPredicted RBP16.19■□□□□ 0.18
SMARCA2-208ENST00000382194 ZSCAN12O43309 604 aa16.19■□□□□ 0.18
SMARCA2-208ENST00000382194 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
SMARCA2-208ENST00000382194 FAM177A1Q8N128 213 aaPredicted RBP16.19■□□□□ 0.18
SMARCA2-208ENST00000382194 PDE4BQ07343 736 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 CCDC83Q8IWF9 413 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 CCDC172P0C7W6 258 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 NLRP5P59047 1200 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 NCBP1Q09161 790 aaKnown RBP16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 IFFO1Q0D2I5 559 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 CCDC178Q5BJE1 867 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 PAFAH1B1P43034 410 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 DDX23Q9BUQ8 820 aaKnown RBP16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 CCDC113Q9H0I3 377 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 TCP11L1Q9NUJ3 509 aa16.18■□□□□ 0.18
SMARCA2-208ENST00000382194 ZNF622Q969S3 477 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■■■□ 25.4
SMARCA2-208ENST00000382194 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 CCDC102AQ96A19 550 aa16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 RFC4P35249 363 aa16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 FAM114A1Q8IWE2 563 aa16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 SYCP3Q8IZU3 236 aa16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 SAMM50Q9Y512 469 aa16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 SLU7O95391 586 aaKnown RBP16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 NOP2P46087 812 aaKnown RBP16.17■□□□□ 0.18
SMARCA2-208ENST00000382194 STX6O43752 255 aa16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 XPCQ01831 940 aaPredicted RBP16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 SSRP1Q08945 709 aaKnown RBP16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 RGS22Q8NE09 1264 aa16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 FSD2A1L4K1 749 aa16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 POLD1P28340 1107 aa16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 CCDC117Q8IWD4 279 aaPredicted RBP16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 ERMNQ8TAM6 284 aa16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 NAA15Q9BXJ9 866 aaKnown RBP16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 FANCIQ9NVI1 1328 aa16.16■□□□□ 0.18
SMARCA2-208ENST00000382194 ZNF213O14771 459 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 KIF5CO60282 957 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 LMAN1P49257 510 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 BICD1Q96G01 975 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 MPRIPQ6WCQ1 1025 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 PSMD1Q99460 953 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 SHTN1A0MZ66 631 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 PLVAPQ9BX97 442 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 DAPK1P53355 1430 aa16.15■□□□□ 0.18
SMARCA2-208ENST00000382194 MAP3K11Q16584 847 aa16.14■□□□□ 0.18
SMARCA2-208ENST00000382194 RAB3IL1Q8TBN0 382 aa16.14■□□□□ 0.18
SMARCA2-208ENST00000382194 MYD88Q99836 296 aa16.14■□□□□ 0.18
SMARCA2-208ENST00000382194 YEATS4O95619 227 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 TDRD12Q587J7 1177 aaKnown RBP16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 SPATA24Q86W54 205 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 C8orf76Q96K31 380 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 ANO10Q9NW15 660 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 NFE2L2Q16236 605 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 NBPF8Q3BBV2 869 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 CHD1LQ86WJ1 897 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 TBCAO75347 108 aaKnown RBP16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 BCAR3O75815 825 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 CCDC40Q4G0X9 1142 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 ALS2CR12Q96Q35 445 aa16.14■□□□□ 0.17
SMARCA2-208ENST00000382194 KAT14Q9H8E8 782 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 GOLGA8AA7E2F4 631 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 ZNF354CQ86Y25 554 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 SLC12A5Q9H2X9 1139 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 PRC1O43663 620 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 UBXN4Q92575 508 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 GOPCQ9HD26 462 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 IKBKGQ9Y6K9 419 aa16.13■□□□□ 0.17
SMARCA2-208ENST00000382194 IFIT3O14879 490 aaKnown RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 SH2B1Q9NRF2 756 aaPredicted RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 PUF60Q9UHX1 559 aaKnown RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 CASTP20810 708 aaKnown RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 MVPQ14764 893 aaKnown RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 TAF12Q16514 161 aa16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 SYNCQ9H7C4 482 aa16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 CIZ1Q9ULV3 898 aaPredicted RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 TAF7Q15545 349 aaPredicted RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 CKAP2LQ8IYA6 745 aa16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 SCAND2PQ9GZW5 306 aaPredicted RBP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 TCERG1LQ5VWI1 586 aa16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMARCA2-208ENST00000382194 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 FILIP1Q7Z7B0 1213 aa16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms