RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 BBXQ8WY36 941 aaPredicted RBP6.77□□□□□ -1.33
RFX3-204ENST00000382004 JADE2Q9NQC1 790 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 ZNF287Q9HBT7 754 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 HSPA4P34932 840 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 CCDC40Q4G0X9 1142 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 SEPT6Q14141 434 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 MAP7D1Q3KQU3 841 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 TMEM132EQ6IEE7 984 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 CCDC63Q8NA47 563 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 IQCGQ9H095 443 aaKnown RBP6.77□□□□□ -1.33
RFX3-204ENST00000382004 ANAPC4Q9UJX5 808 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 RRBP1Q9P2E9 1410 aaKnown RBP6.77□□□□□ -1.33
RFX3-204ENST00000382004 NOL3O60936 208 aaKnown RBP6.77□□□□□ -1.33
RFX3-204ENST00000382004 GTF2A1P52655 376 aaPredicted RBP6.77□□□□□ -1.33
RFX3-204ENST00000382004 CHD1LQ86WJ1 897 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 DZIP1Q86YF9 867 aaKnown RBP6.77□□□□□ -1.33
RFX3-204ENST00000382004 CCDC155Q8N6L0 562 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 RAB34Q9BZG1 259 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 XPCQ01831 940 aaPredicted RBP6.77□□□□□ -1.33
RFX3-204ENST00000382004 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 CNNM3Q8NE01 707 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 RANBP6O60518 1105 aaKnown RBP6.77□□□□□ -1.33
RFX3-204ENST00000382004 MCM4P33991 863 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 METTL24Q5JXM2 366 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 SYNCQ9H7C4 482 aa6.77□□□□□ -1.33
RFX3-204ENST00000382004 PPP4R3BQ5MIZ7 849 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 ISM2Q6H9L7 571 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 TMC6Q7Z403 805 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 NUTM1Q86Y26 1132 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.76□□□□□ -1.33
RFX3-204ENST00000382004 V9GYY5 206 aaPredicted RBP6.76□□□□□ -1.33
RFX3-204ENST00000382004 TTC36A6NLP5 189 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 CCDC183Q5T5S1 534 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 C8orf76Q96K31 380 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 NLRP5P59047 1200 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 ZBTB16Q05516 673 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 RPUSD2Q8IZ73 545 aaKnown RBP6.76□□□□□ -1.33
RFX3-204ENST00000382004 HYPKQ9NX55 129 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 BIN1O00499 593 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 ZNF444Q8N0Y2 327 aaPredicted RBP6.76□□□□□ -1.33
RFX3-204ENST00000382004 RNF216Q9NWF9 866 aaPredicted RBP6.76□□□□□ -1.33
RFX3-204ENST00000382004 SAMM50Q9Y512 469 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 KIAA0753Q2KHM9 967 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 SULT6B1Q6IMI4 303 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 ZNF530Q6P9A1 599 aaPredicted RBP6.76□□□□□ -1.33
RFX3-204ENST00000382004 CKAP2LQ8IYA6 745 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 U3KPZ7 1027 aaPredicted RBP6.76□□□□□ -1.33
RFX3-204ENST00000382004 POTEB2H3BUK9 544 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 KIF4AO95239 1232 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 TMCO4Q5TGY1 634 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 CCDC144CPQ8IYA2 1237 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 BICD1Q96G01 975 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 RAD54L2Q9Y4B4 1467 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 FHOD3Q2V2M9 1422 aa6.76□□□□□ -1.33
RFX3-204ENST00000382004 EHMT1Q9H9B1 1298 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 CKAP4Q07065 602 aaKnown RBP6.75□□□□□ -1.33
RFX3-204ENST00000382004 LRRC45Q96CN5 670 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 NAPBQ9H115 298 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 ANKIB1Q9P2G1 1089 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 BAG4O95429 457 aaKnown RBP6.75□□□□□ -1.33
RFX3-204ENST00000382004 SSRP1Q08945 709 aaKnown RBP6.75□□□□□ -1.33
RFX3-204ENST00000382004 DDX46Q7L014 1031 aaKnown RBP6.75□□□□□ -1.33
RFX3-204ENST00000382004 CTCFLQ8NI51 663 aaPredicted RBP6.75□□□□□ -1.33
RFX3-204ENST00000382004 ODF2LQ9ULJ1 636 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 BTBD11A6QL63 1104 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 MAP3K9P80192 1104 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 MSL1Q68DK7 614 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 SLU7O95391 586 aaKnown RBP6.75□□□□□ -1.33
RFX3-204ENST00000382004 IDEP14735 1019 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 ZBTB9Q96C00 473 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 PHAXQ9H814 394 aaKnown RBP6.75□□□□□ -1.33
RFX3-204ENST00000382004 NSRP1Q9H0G5 558 aaKnown RBP6.75□□□□□ -1.33
RFX3-204ENST00000382004 CALML4Q96GE6 196 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
RFX3-204ENST00000382004 TDRD9Q8NDG6 1382 aaKnown RBP6.74□□□□□ -1.33
RFX3-204ENST00000382004 CCDC194A0A1B0GVG4 234 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 CAVIN4Q5BKX8 364 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 KIF20AO95235 890 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 SMC6Q96SB8 1091 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 SLC12A7Q9Y666 1083 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 SNW1Q13573 536 aaKnown RBP6.74□□□□□ -1.33
RFX3-204ENST00000382004 PRPF40BQ6NWY9 871 aaKnown RBP6.74□□□□□ -1.33
RFX3-204ENST00000382004 SMC1BQ8NDV3 1235 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 KAT6BQ8WYB5 2073 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 A0A087WZG4 1122 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 CCDC196A0A1B0GTZ2 297 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 GJC1P36383 396 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 FSIP1Q8NA03 581 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 CEP83Q9Y592 693 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 DYNC1I1O14576 645 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 SLC4A8Q2Y0W8 1093 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 PANK2Q9BZ23 570 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 ZNF219Q9P2Y4 722 aaPredicted RBP6.74□□□□□ -1.33
RFX3-204ENST00000382004 TMEM110-MUSTN1A8MSY1 372 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 CCT2P78371 535 aaKnown RBP6.74□□□□□ -1.33
RFX3-204ENST00000382004 CYB5RLQ6IPT4 315 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 CCDC12Q8WUD4 166 aaPredicted RBP6.74□□□□□ -1.33
RFX3-204ENST00000382004 NAA25Q14CX7 972 aa6.74□□□□□ -1.33
RFX3-204ENST00000382004 CCDC174Q6PII3 467 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms