RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 SALL3Q9BXA9 1300 aa30.91■■■□□ 2.54
NDEL1-202ENST00000380025 SSH3Q8TE77 659 aa30.9■■■□□ 2.54
NDEL1-202ENST00000380025 SLKQ9H2G2 1235 aaPredicted RBP30.9■■■□□ 2.54
NDEL1-202ENST00000380025 NBPF7P0C2Y1 421 aaPredicted RBP30.9■■■□□ 2.54
NDEL1-202ENST00000380025 PDE1AP54750 535 aa30.9■■■□□ 2.54
NDEL1-202ENST00000380025 SLC39A6Q13433 755 aa30.9■■■□□ 2.54
NDEL1-202ENST00000380025 CYP27B1O15528 508 aa30.89■■■□□ 2.54
NDEL1-202ENST00000380025 NFATC2IPQ8NCF5 419 aa30.89■■■□□ 2.54
NDEL1-202ENST00000380025 KIF2CQ99661 725 aa30.89■■■□□ 2.54
NDEL1-202ENST00000380025 ABCA3Q99758 1704 aa30.88■■■□□ 2.53
NDEL1-202ENST00000380025 TUBGCP6Q96RT7 1819 aa30.88■■■□□ 2.53
NDEL1-202ENST00000380025 HYPKQ9NX55 129 aa30.88■■■□□ 2.53
NDEL1-202ENST00000380025 POLA2Q14181 598 aa30.87■■■□□ 2.53
NDEL1-202ENST00000380025 DCAF5Q96JK2 942 aa30.87■■■□□ 2.53
NDEL1-202ENST00000380025 MAP3K2Q9Y2U5 619 aa30.87■■■□□ 2.53
NDEL1-202ENST00000380025 KSR2Q6VAB6 950 aa30.86■■■□□ 2.53
NDEL1-202ENST00000380025 PPP1R42Q7Z4L9 355 aa30.86■■■□□ 2.53
NDEL1-202ENST00000380025 DDX21Q9NR30 783 aaKnown RBP eCLIP30.86■■■□□ 2.53
NDEL1-202ENST00000380025 EIF5BO60841 1220 aaKnown RBP30.85■■■□□ 2.53
NDEL1-202ENST00000380025 PDIA6Q15084 440 aa30.85■■■□□ 2.53
NDEL1-202ENST00000380025 PRDM11Q9NQV5 511 aa30.85■■■□□ 2.53
NDEL1-202ENST00000380025 PARP4Q9UKK3 1724 aaKnown RBP30.85■■■□□ 2.53
NDEL1-202ENST00000380025 DEKP35659 375 aaKnown RBP30.85■■■□□ 2.53
NDEL1-202ENST00000380025 HSCBQ8IWL3 235 aa30.83■■■□□ 2.53
NDEL1-202ENST00000380025 SNX21Q969T3 373 aa30.83■■■□□ 2.53
NDEL1-202ENST00000380025 WDR17Q8IZU2 1322 aa30.83■■■□□ 2.53
NDEL1-202ENST00000380025 ALDH1L1O75891 902 aa30.82■■■□□ 2.52
NDEL1-202ENST00000380025 COL5A2P05997 1499 aaPredicted RBP30.81■■■□□ 2.52
NDEL1-202ENST00000380025 MX1P20591 662 aa30.81■■■□□ 2.52
NDEL1-202ENST00000380025 FRAT2O75474 233 aaPredicted RBP30.81■■■□□ 2.52
NDEL1-202ENST00000380025 HSP90AB1P08238 724 aaKnown RBP30.81■■■□□ 2.52
NDEL1-202ENST00000380025 ZNF496Q96IT1 587 aaPredicted RBP30.81■■■□□ 2.52
NDEL1-202ENST00000380025 SRGAP3O43295 1099 aa30.8■■■□□ 2.52
NDEL1-202ENST00000380025 NHSL1Q5SYE7 1610 aa30.8■■■□□ 2.52
NDEL1-202ENST00000380025 TSHZ3Q63HK5 1081 aa30.79■■■□□ 2.52
NDEL1-202ENST00000380025 CASC1Q6TDU7 716 aa30.79■■■□□ 2.52
NDEL1-202ENST00000380025 RAB11FIP3O75154 756 aa30.78■■■□□ 2.52
NDEL1-202ENST00000380025 SPRYD3Q8NCJ5 442 aa30.78■■■□□ 2.52
NDEL1-202ENST00000380025 STAP2Q9UGK3 403 aa30.78■■■□□ 2.52
NDEL1-202ENST00000380025 SURF6O75683 361 aaKnown RBP30.77■■■□□ 2.52
NDEL1-202ENST00000380025 DDX58O95786 925 aaKnown RBP30.77■■■□□ 2.52
NDEL1-202ENST00000380025 CWF19L2Q2TBE0 894 aaKnown RBP30.77■■■□□ 2.52
NDEL1-202ENST00000380025 TOM1L2Q6ZVM7 507 aa30.76■■■□□ 2.52
NDEL1-202ENST00000380025 USP26Q9BXU7 913 aa30.76■■■□□ 2.52
NDEL1-202ENST00000380025 AIMP1Q12904 312 aaKnown RBP30.76■■■□□ 2.51
NDEL1-202ENST00000380025 TTC5Q8N0Z6 440 aa30.76■■■□□ 2.51
NDEL1-202ENST00000380025 GLI3P10071 1580 aa30.76■■■□□ 2.51
NDEL1-202ENST00000380025 MTX1Q13505 466 aa30.75■■■□□ 2.51
NDEL1-202ENST00000380025 LINS1Q8NG48 757 aa30.75■■■□□ 2.51
NDEL1-202ENST00000380025 C9orf78Q9NZ63 289 aaPredicted RBP30.75■■■□□ 2.51
NDEL1-202ENST00000380025 IL1RAPL2Q9NP60 686 aa30.75■■■□□ 2.51
NDEL1-202ENST00000380025 CABP4P57796 275 aa30.74■■■□□ 2.51
NDEL1-202ENST00000380025 SNRPA1P09661 255 aaKnown RBP30.73■■■□□ 2.51
NDEL1-202ENST00000380025 RHPN1Q8TCX5 695 aa30.73■■■□□ 2.51
NDEL1-202ENST00000380025 AOX1Q06278 1338 aa30.73■■■□□ 2.51
NDEL1-202ENST00000380025 FMNL2Q96PY5 1086 aa30.72■■■□□ 2.51
NDEL1-202ENST00000380025 RBM42Q9BTD8 480 aaKnown RBP30.72■■■□□ 2.51
NDEL1-202ENST00000380025 PCDH11XQ9BZA7 1347 aa30.72■■■□□ 2.51
NDEL1-202ENST00000380025 PCDH11YQ9BZA8 1340 aa30.72■■■□□ 2.51
NDEL1-202ENST00000380025 MYL6BP14649 208 aa30.72■■■□□ 2.51
NDEL1-202ENST00000380025 USP16Q9Y5T5 823 aa30.72■■■□□ 2.51
NDEL1-202ENST00000380025 CD2BP2O95400 341 aaKnown RBP30.71■■■□□ 2.51
NDEL1-202ENST00000380025 ZCRB1Q8TBF4 217 aaKnown RBP30.71■■■□□ 2.51
NDEL1-202ENST00000380025 LAMB4A4D0S4 1761 aa30.71■■■□□ 2.51
NDEL1-202ENST00000380025 UTYO14607 1347 aa30.71■■■□□ 2.51
NDEL1-202ENST00000380025 LRP10Q7Z4F1 713 aa30.71■■■□□ 2.51
NDEL1-202ENST00000380025 KIF1BPQ96EK5 621 aa30.71■■■□□ 2.51
NDEL1-202ENST00000380025 XAGE3Q8WTP9 111 aa30.7■■■□□ 2.51
NDEL1-202ENST00000380025 SHANK3Q9BYB0 1731 aa30.7■■■□□ 2.5
NDEL1-202ENST00000380025 CARD10Q9BWT7 1032 aa30.69■■■□□ 2.5
NDEL1-202ENST00000380025 GRM8O00222 908 aa30.69■■■□□ 2.5
NDEL1-202ENST00000380025 ERC2O15083 957 aa30.69■■■□□ 2.5
NDEL1-202ENST00000380025 RIC3Q7Z5B4 369 aa30.69■■■□□ 2.5
NDEL1-202ENST00000380025 HDAC5Q9UQL6 1122 aa30.69■■■□□ 2.5
NDEL1-202ENST00000380025 REC8O95072 547 aa30.68■■■□□ 2.5
NDEL1-202ENST00000380025 IGKV5-2P06315 115 aa30.68■■■□□ 2.5
NDEL1-202ENST00000380025 LARP1Q6PKG0 1096 aaKnown RBP30.68■■■□□ 2.5
NDEL1-202ENST00000380025 HSP90AB4PQ58FF6 505 aa30.68■■■□□ 2.5
NDEL1-202ENST00000380025 COPS6Q7L5N1 327 aa30.68■■■□□ 2.5
NDEL1-202ENST00000380025 NUTM1Q86Y26 1132 aa30.68■■■□□ 2.5
NDEL1-202ENST00000380025 CHMP5Q9NZZ3 219 aa30.66■■■□□ 2.5
NDEL1-202ENST00000380025 KAZALD1Q96I82 304 aa30.66■■■□□ 2.5
NDEL1-202ENST00000380025 UBR2Q8IWV8 1755 aa30.65■■■□□ 2.5
NDEL1-202ENST00000380025 IL2RBP14784 551 aa30.65■■■□□ 2.5
NDEL1-202ENST00000380025 DDIT3P35638 169 aa30.65■■■□□ 2.5
NDEL1-202ENST00000380025 SUCLG2Q96I99 432 aa30.65■■■□□ 2.5
NDEL1-202ENST00000380025 RABEP1Q15276 862 aa30.65■■■□□ 2.5
NDEL1-202ENST00000380025 TRIM6-TRIM34B2RNG4 842 aa30.64■■■□□ 2.5
NDEL1-202ENST00000380025 UNC5CLQ8IV45 518 aa30.64■■■□□ 2.49
NDEL1-202ENST00000380025 RILPL2Q969X0 211 aa30.64■■■□□ 2.49
NDEL1-202ENST00000380025 METTL22Q9BUU2 404 aaPredicted RBP30.64■■■□□ 2.49
NDEL1-202ENST00000380025 STRN4Q9NRL3 753 aa30.64■■■□□ 2.49
NDEL1-202ENST00000380025 NEURL1BA8MQ27 555 aa30.63■■■□□ 2.49
NDEL1-202ENST00000380025 K7ELQ4 463 aaPredicted RBP30.63■■■□□ 2.49
NDEL1-202ENST00000380025 PIP4K2AP48426 406 aaPredicted RBP30.63■■■□□ 2.49
NDEL1-202ENST00000380025 NKX1-1Q15270 411 aaPredicted RBP30.63■■■□□ 2.49
NDEL1-202ENST00000380025 PAPPAQ13219 1627 aa30.63■■■□□ 2.49
NDEL1-202ENST00000380025 NEXNQ0ZGT2 675 aa30.62■■■□□ 2.49
NDEL1-202ENST00000380025 PI4K2BQ8TCG2 481 aa30.62■■■□□ 2.49
NDEL1-202ENST00000380025 ESYT1Q9BSJ8 1104 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms