RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
NHLRC3-201ENST00000379599 C11orf91Q3C1V1 193 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 LRRC8AQ8IWT6 810 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 FUCA2Q9BTY2 467 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 GNL3LQ9NVN8 582 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 CPSF2Q9P2I0 782 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 CFAP65Q6ZU64 1925 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 BIVM-ERCC5R4GMW8 1640 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 TOPBP1Q92547 1522 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 IPO8O15397 1037 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 RDXP35241 583 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 FBXW10Q5XX13 1052 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 N4BP2L2Q92802 583 aaPredicted RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 NUCKS1Q9H1E3 243 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 ARFGAP3Q9NP61 516 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 BSDC1Q9NW68 430 aaPredicted RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 MKRN1Q9UHC7 482 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 ATP8B1O43520 1251 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 INTS3Q68E01 1043 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 CASC1Q6TDU7 716 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 CKAP2LQ8IYA6 745 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 CCAR2Q8N163 923 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 FAXDC2Q96IV6 333 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 C1orf115Q9H7X2 142 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 VEZTQ9HBM0 779 aa9.97□□□□□ -0.81
NHLRC3-201ENST00000379599 ELF1P32519 619 aa9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 NF2P35240 595 aa9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 IRX1P78414 480 aaPredicted RBP9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 CCDC30Q5VVM6 783 aa9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 JAKMIP3Q5VZ66 844 aa9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 CPLX2Q6PUV4 134 aaKnown RBP9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 SRCIN1Q9C0H9 1055 aa9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 PDS5BQ9NTI5 1447 aa9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 ELP1O95163 1332 aa9.96□□□□□ -0.81
NHLRC3-201ENST00000379599 H3BQF6 201 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 IPO7O95373 1038 aaKnown RBP9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 CPP00450 1065 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 ANO6Q4KMQ2 910 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 ZC3H12AQ5D1E8 599 aaKnown RBP9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 ISM2Q6H9L7 571 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 FMNL3Q8IVF7 1028 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 CTCFLQ8NI51 663 aaPredicted RBP9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 PAIP2Q9BPZ3 127 aaKnown RBP9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 UBXN6Q9BZV1 441 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 CBX8Q9HC52 389 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 ZBTB40Q9NUA8 1239 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 CLASP1Q7Z460 1538 aa9.96□□□□□ -0.82
NHLRC3-201ENST00000379599 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 ANAPC15P60006 121 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 TYRO3Q06418 890 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 MCM6Q14566 821 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 CC2D1AQ6P1N0 951 aaPredicted RBP9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 ATF7IPQ6VMQ6 1270 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 KAT2BQ92831 832 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 NBPF3Q9H094 633 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 URI1O94763 535 aaPredicted RBP9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 INHBEP58166 350 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 ERC1Q8IUD2 1116 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 NOB1Q9ULX3 412 aaKnown RBP9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 EVCP57679 992 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 NEDD9Q14511 834 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 TCP11L2Q8N4U5 519 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 CARD6Q9BX69 1037 aa9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 TRIM6Q9C030 488 aaPredicted RBP9.95□□□□□ -0.82
NHLRC3-201ENST00000379599 URB2Q14146 1524 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 MAP3K11Q16584 847 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 L2HGDHQ9H9P8 463 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 UHRF1BP1Q6BDS2 1440 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 FRMD3A2A2Y4 597 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 NEMFO60524 1076 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 PHACTR2O75167 634 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 GSPT1P15170 499 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 EIF5P55010 431 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 TSR2Q969E8 191 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 DNAI1Q9UI46 699 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 KANK1Q14678 1352 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 PLA2G4DQ86XP0 818 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 TEX11Q8IYF3 940 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 PDE11AQ9HCR9 933 aa9.94□□□□□ -0.82
NHLRC3-201ENST00000379599 GPRASP1Q5JY77 1395 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 SCRN1Q12765 414 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 PSMD2Q13200 908 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 LRRC31Q6UY01 552 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 GCC1Q96CN9 775 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 THOC1Q96FV9 657 aaKnown RBP9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 ETAA1Q9NY74 926 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 GOLGA6L19H0YKK7 550 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 ERCC3P19447 782 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 PDE6BP35913 854 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 ATP2B2Q01814 1243 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 ERCC6Q03468 1493 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 SSH1Q8WYL5 1049 aa9.93□□□□□ -0.82
NHLRC3-201ENST00000379599 CTAGE5O15320 804 aa9.92□□□□□ -0.82
NHLRC3-201ENST00000379599 CCDC158Q5M9N0 1113 aa9.92□□□□□ -0.82
NHLRC3-201ENST00000379599 ARMC3Q5W041 872 aa9.92□□□□□ -0.82
NHLRC3-201ENST00000379599 TESK2Q96S53 571 aa9.92□□□□□ -0.82
NHLRC3-201ENST00000379599 FAM107BQ9H098 131 aa9.92□□□□□ -0.82
NHLRC3-201ENST00000379599 NUP62CLQ9H1M0 184 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms