RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 PPP1R42Q7Z4L9 355 aa26.39■■□□□ 1.82
CNTFR-202ENST00000378980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.39■■□□□ 1.82
CNTFR-202ENST00000378980 PKD1L3Q7Z443 1732 aa26.39■■□□□ 1.81
CNTFR-202ENST00000378980 CD2BP2O95400 341 aaKnown RBP26.38■■□□□ 1.81
CNTFR-202ENST00000378980 HSP90AB1P08238 724 aaKnown RBP26.38■■□□□ 1.81
CNTFR-202ENST00000378980 PROSER3Q2NL68 480 aa26.38■■□□□ 1.81
CNTFR-202ENST00000378980 RBM42Q9BTD8 480 aaKnown RBP26.38■■□□□ 1.81
CNTFR-202ENST00000378980 SPG7Q9UQ90 795 aa26.38■■□□□ 1.81
CNTFR-202ENST00000378980 C5P01031 1676 aa26.38■■□□□ 1.81
CNTFR-202ENST00000378980 PRAMEF22A3QJZ6 481 aa26.38■■□□□ 1.81
CNTFR-202ENST00000378980 PHKG2P15735 406 aa26.38■■□□□ 1.81
CNTFR-202ENST00000378980 CPDO75976 1380 aa26.37■■□□□ 1.81
CNTFR-202ENST00000378980 SLC52A2Q9HAB3 445 aa26.37■■□□□ 1.81
CNTFR-202ENST00000378980 STAP2Q9UGK3 403 aa26.37■■□□□ 1.81
CNTFR-202ENST00000378980 RAB11FIP3O75154 756 aa26.36■■□□□ 1.81
CNTFR-202ENST00000378980 CSB-PGBD3P0DP91 1061 aa26.36■■□□□ 1.81
CNTFR-202ENST00000378980 TSHZ3Q63HK5 1081 aa26.36■■□□□ 1.81
CNTFR-202ENST00000378980 HYPKQ9NX55 129 aa26.36■■□□□ 1.81
CNTFR-202ENST00000378980 K7ELQ4 463 aaPredicted RBP26.35■■□□□ 1.81
CNTFR-202ENST00000378980 REC8O95072 547 aa26.35■■□□□ 1.81
CNTFR-202ENST00000378980 RABEP1Q15276 862 aa26.35■■□□□ 1.81
CNTFR-202ENST00000378980 CHRNA2Q15822 529 aa26.35■■□□□ 1.81
CNTFR-202ENST00000378980 KSR2Q6VAB6 950 aa26.35■■□□□ 1.81
CNTFR-202ENST00000378980 MAP3K2Q9Y2U5 619 aa26.35■■□□□ 1.81
CNTFR-202ENST00000378980 MRC1P22897 1456 aa26.35■■□□□ 1.81
CNTFR-202ENST00000378980 AOX1Q06278 1338 aa26.35■■□□□ 1.81
CNTFR-202ENST00000378980 ERC2O15083 957 aa26.34■■□□□ 1.81
CNTFR-202ENST00000378980 SRGAP3O43295 1099 aa26.34■■□□□ 1.81
CNTFR-202ENST00000378980 ALDH1L1O75891 902 aa26.34■■□□□ 1.81
CNTFR-202ENST00000378980 ZNF790Q6PG37 636 aa26.34■■□□□ 1.81
CNTFR-202ENST00000378980 STRCQ7RTU9 1775 aa26.33■■□□□ 1.81
CNTFR-202ENST00000378980 SURF6O75683 361 aaKnown RBP26.33■■□□□ 1.81
CNTFR-202ENST00000378980 IFNL2Q8IZJ0 200 aa26.33■■□□□ 1.81
CNTFR-202ENST00000378980 DDX21Q9NR30 783 aaKnown RBP eCLIP26.33■■□□□ 1.81
CNTFR-202ENST00000378980 BRINP3Q76B58 766 aa26.32■■□□□ 1.8
CNTFR-202ENST00000378980 SLC39A6Q13433 755 aa26.31■■□□□ 1.8
CNTFR-202ENST00000378980 CIZ1Q9ULV3 898 aaPredicted RBP26.31■■□□□ 1.8
CNTFR-202ENST00000378980 IL1RAPL2Q9NP60 686 aa26.3■■□□□ 1.8
CNTFR-202ENST00000378980 MTX1Q13505 466 aa26.3■■□□□ 1.8
CNTFR-202ENST00000378980 PDIA6Q15084 440 aa26.3■■□□□ 1.8
CNTFR-202ENST00000378980 NFATC2IPQ8NCF5 419 aa26.3■■□□□ 1.8
CNTFR-202ENST00000378980 RHPN1Q8TCX5 695 aa26.3■■□□□ 1.8
CNTFR-202ENST00000378980 MCM4P33991 863 aa26.29■■□□□ 1.8
CNTFR-202ENST00000378980 KIF1BPQ96EK5 621 aa26.29■■□□□ 1.8
CNTFR-202ENST00000378980 PARP4Q9UKK3 1724 aaKnown RBP26.29■■□□□ 1.8
CNTFR-202ENST00000378980 AK9Q5TCS8 1911 aa26.29■■□□□ 1.8
CNTFR-202ENST00000378980 DDX58O95786 925 aaKnown RBP26.28■■□□□ 1.8
CNTFR-202ENST00000378980 DCAF5Q96JK2 942 aa26.28■■□□□ 1.8
CNTFR-202ENST00000378980 CYP27B1O15528 508 aa26.27■■□□□ 1.8
CNTFR-202ENST00000378980 C9orf78Q9NZ63 289 aaPredicted RBP26.27■■□□□ 1.8
CNTFR-202ENST00000378980 HSP90AB4PQ58FF6 505 aa26.27■■□□□ 1.8
CNTFR-202ENST00000378980 LINS1Q8NG48 757 aa26.27■■□□□ 1.8
CNTFR-202ENST00000378980 ESYT1Q9BSJ8 1104 aa26.27■■□□□ 1.8
CNTFR-202ENST00000378980 HSP90AA1P07900 732 aaKnown RBP26.26■■□□□ 1.79
CNTFR-202ENST00000378980 TRIM6-TRIM34B2RNG4 842 aa26.26■■□□□ 1.79
CNTFR-202ENST00000378980 CWF19L2Q2TBE0 894 aaKnown RBP26.26■■□□□ 1.79
CNTFR-202ENST00000378980 NUTM1Q86Y26 1132 aa26.26■■□□□ 1.79
CNTFR-202ENST00000378980 HDAC5Q9UQL6 1122 aa26.26■■□□□ 1.79
CNTFR-202ENST00000378980 CHMLP26374 656 aa26.25■■□□□ 1.79
CNTFR-202ENST00000378980 RILPL2Q969X0 211 aa26.25■■□□□ 1.79
CNTFR-202ENST00000378980 UTYO14607 1347 aa26.24■■□□□ 1.79
CNTFR-202ENST00000378980 ZNF496Q96IT1 587 aaPredicted RBP26.24■■□□□ 1.79
CNTFR-202ENST00000378980 AIMP1Q12904 312 aaKnown RBP26.23■■□□□ 1.79
CNTFR-202ENST00000378980 UNC5CLQ8IV45 518 aa26.23■■□□□ 1.79
CNTFR-202ENST00000378980 GRM8O00222 908 aa26.22■■□□□ 1.79
CNTFR-202ENST00000378980 RAB3GAP1Q15042 981 aa26.22■■□□□ 1.79
CNTFR-202ENST00000378980 PI4K2BQ8TCG2 481 aa26.22■■□□□ 1.79
CNTFR-202ENST00000378980 ABCA3Q99758 1704 aa26.22■■□□□ 1.79
CNTFR-202ENST00000378980 SOS2Q07890 1332 aaPredicted RBP26.22■■□□□ 1.79
CNTFR-202ENST00000378980 TTC5Q8N0Z6 440 aa26.21■■□□□ 1.79
CNTFR-202ENST00000378980 FOXD4L1Q9NU39 408 aa26.21■■□□□ 1.79
CNTFR-202ENST00000378980 LAMB4A4D0S4 1761 aa26.2■■□□□ 1.79
CNTFR-202ENST00000378980 GLI3P10071 1580 aa26.2■■□□□ 1.79
CNTFR-202ENST00000378980 WDR17Q8IZU2 1322 aa26.2■■□□□ 1.78
CNTFR-202ENST00000378980 ST18O60284 1047 aa26.19■■□□□ 1.78
CNTFR-202ENST00000378980 SNRPA1P09661 255 aaKnown RBP26.19■■□□□ 1.78
CNTFR-202ENST00000378980 LARP1Q6PKG0 1096 aaKnown RBP26.19■■□□□ 1.78
CNTFR-202ENST00000378980 USP42Q9H9J4 1324 aaKnown RBP26.19■■□□□ 1.78
CNTFR-202ENST00000378980 MYL6BP14649 208 aa26.19■■□□□ 1.78
CNTFR-202ENST00000378980 RIC3Q7Z5B4 369 aa26.19■■□□□ 1.78
CNTFR-202ENST00000378980 TNPO1Q92973 898 aaKnown RBP26.19■■□□□ 1.78
CNTFR-202ENST00000378980 PRDM11Q9NQV5 511 aa26.19■■□□□ 1.78
CNTFR-202ENST00000378980 SLAIN2Q9P270 581 aa26.19■■□□□ 1.78
CNTFR-202ENST00000378980 IGKV5-2P06315 115 aa26.18■■□□□ 1.78
CNTFR-202ENST00000378980 OS9Q13438 667 aaPredicted RBP26.18■■□□□ 1.78
CNTFR-202ENST00000378980 XAGE3Q8WTP9 111 aa26.18■■□□□ 1.78
CNTFR-202ENST00000378980 SUCLG2Q96I99 432 aa26.18■■□□□ 1.78
CNTFR-202ENST00000378980 FMNL2Q96PY5 1086 aa26.18■■□□□ 1.78
CNTFR-202ENST00000378980 DDX11L8A8MPP1 907 aa26.17■■□□□ 1.78
CNTFR-202ENST00000378980 CABP4P57796 275 aa26.17■■□□□ 1.78
CNTFR-202ENST00000378980 LRP10Q7Z4F1 713 aa26.17■■□□□ 1.78
CNTFR-202ENST00000378980 KAZALD1Q96I82 304 aa26.17■■□□□ 1.78
CNTFR-202ENST00000378980 ZNF335Q9H4Z2 1342 aaPredicted RBP26.17■■□□□ 1.78
CNTFR-202ENST00000378980 COL5A2P05997 1499 aaPredicted RBP26.17■■□□□ 1.78
CNTFR-202ENST00000378980 USP16Q9Y5T5 823 aa26.16■■□□□ 1.78
CNTFR-202ENST00000378980 COPS6Q7L5N1 327 aa26.16■■□□□ 1.78
CNTFR-202ENST00000378980 ERC1Q8IUD2 1116 aa26.16■■□□□ 1.78
CNTFR-202ENST00000378980 TTC41PQ6P2S7 1318 aa26.15■■□□□ 1.78
CNTFR-202ENST00000378980 NEXNQ0ZGT2 675 aa26.15■■□□□ 1.78
CNTFR-202ENST00000378980 NEURL1BA8MQ27 555 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms