RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 PRKCSHP14314 528 aaPredicted RBP12.97□□□□□ -0.33
RAD50-201ENST00000378823 TMPOP42166 694 aaKnown RBP12.97□□□□□ -0.33
RAD50-201ENST00000378823 CAVIN4Q5BKX8 364 aa12.97□□□□□ -0.33
RAD50-201ENST00000378823 MACROD2A1Z1Q3 448 aa12.97□□□□□ -0.33
RAD50-201ENST00000378823 CTNNA2P26232 953 aa12.97□□□□□ -0.33
RAD50-201ENST00000378823 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
RAD50-201ENST00000378823 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
RAD50-201ENST00000378823 ATAD2Q6PL18 1390 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 STX1AQ16623 288 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 CTCFLQ8NI51 663 aaPredicted RBP12.96□□□□□ -0.33
RAD50-201ENST00000378823 SLC12A7Q9Y666 1083 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 RAD54L2Q9Y4B4 1467 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 UBA5Q9GZZ9 404 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 PTPN23Q9H3S7 1636 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 A0A087WZG4 1122 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 PRDM10Q9NQV6 1147 aa12.96□□□□□ -0.33
RAD50-201ENST00000378823 KIF20AO95235 890 aa12.96□□□□□ -0.34
RAD50-201ENST00000378823 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.34
RAD50-201ENST00000378823 SPATA24Q86W54 205 aa12.96□□□□□ -0.34
RAD50-201ENST00000378823 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.34
RAD50-201ENST00000378823 TDRD12Q587J7 1177 aaKnown RBP12.96□□□□□ -0.34
RAD50-201ENST00000378823 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.34
RAD50-201ENST00000378823 SPECC1LQ69YQ0 1117 aa12.96□□□□□ -0.34
RAD50-201ENST00000378823 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.34
RAD50-201ENST00000378823 TRMT1Q9NXH9 659 aaKnown RBP12.96□□□□□ -0.34
RAD50-201ENST00000378823 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.34
RAD50-201ENST00000378823 GIGYF2Q6Y7W6 1299 aaKnown RBP12.95□□□□□ -0.34
RAD50-201ENST00000378823 DNA2P51530 1060 aa12.95□□□□□ -0.34
RAD50-201ENST00000378823 FAM135AQ9P2D6 1515 aa12.95□□□□□ -0.34
RAD50-201ENST00000378823 CAVIN2O95810 425 aa12.95□□□□□ -0.34
RAD50-201ENST00000378823 LIMCH1Q9UPQ0 1083 aa12.95□□□□□ -0.34
RAD50-201ENST00000378823 FSD2A1L4K1 749 aa12.95□□□□□ -0.34
RAD50-201ENST00000378823 ZNF213O14771 459 aa12.95□□□□□ -0.34
RAD50-201ENST00000378823 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
RAD50-201ENST00000378823 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
RAD50-201ENST00000378823 POLR3DP05423 398 aaPredicted RBP12.95□□□□□ -0.34
RAD50-201ENST00000378823 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
RAD50-201ENST00000378823 SMARCC1Q92922 1105 aaPredicted RBP12.95□□□□□ -0.34
RAD50-201ENST00000378823 BOLA2Q9H3K6 86 aa12.95□□□□□ -0.34
RAD50-201ENST00000378823 HMGB2P26583 209 aaKnown RBP12.94□□□□□ -0.34
RAD50-201ENST00000378823 MCM5P33992 734 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 PAXBP1Q9Y5B6 917 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
RAD50-201ENST00000378823 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 AMPD3Q01432 767 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 CATIPQ7Z7H3 387 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 MAP3K12Q12852 859 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 THEMISQ8N1K5 641 aaPredicted RBP12.94□□□□□ -0.34
RAD50-201ENST00000378823 IGF1RP08069 1367 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 SLC52A1Q9NWF4 448 aa12.94□□□□□ -0.34
RAD50-201ENST00000378823 SNW1Q13573 536 aaKnown RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 DDX19AQ9NUU7 478 aaKnown RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 PYM1Q9BRP8 204 aaKnown RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 DZIP1Q86YF9 867 aaKnown RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 JADE2Q9NQC1 790 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 ANKIB1Q9P2G1 1089 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 ADCY5O95622 1261 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 DYNC1I1O14576 645 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 FAM114A1Q8IWE2 563 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 CRACR2BQ8N4Y2 399 aaPredicted RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 GOLGA8BA8MQT2 603 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 PPP4R3BQ5MIZ7 849 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 AFAP1Q8N556 730 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 CUL5Q93034 780 aa12.93□□□□□ -0.34
RAD50-201ENST00000378823 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 EPRSP07814 1512 aaKnown RBP12.93□□□□□ -0.34
RAD50-201ENST00000378823 EHBP1Q8NDI1 1231 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 GUCY1B3Q02153 619 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 MTIF2P46199 727 aaKnown RBP12.92□□□□□ -0.34
RAD50-201ENST00000378823 TCP11L1Q9NUJ3 509 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 IFIT1P09914 478 aaKnown RBP12.92□□□□□ -0.34
RAD50-201ENST00000378823 NOP2P46087 812 aaKnown RBP12.92□□□□□ -0.34
RAD50-201ENST00000378823 UBE2HP62256 183 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 CALML4Q96GE6 196 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 ZNF444Q8N0Y2 327 aaPredicted RBP12.92□□□□□ -0.34
RAD50-201ENST00000378823 FSIP1Q8NA03 581 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 FERMT1Q9BQL6 677 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 USP25Q9UHP3 1055 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 PRPF4BQ13523 1007 aaKnown RBP12.92□□□□□ -0.34
RAD50-201ENST00000378823 TMC6Q7Z403 805 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 SCLT1Q96NL6 688 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 PRDM11Q9NQV5 511 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 HOMER2Q9NSB8 354 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 KIF14Q15058 1648 aa12.92□□□□□ -0.34
RAD50-201ENST00000378823 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
RAD50-201ENST00000378823 RANBP6O60518 1105 aaKnown RBP12.91□□□□□ -0.34
RAD50-201ENST00000378823 IFIT5Q13325 482 aaKnown RBP12.91□□□□□ -0.34
RAD50-201ENST00000378823 C6orf163Q5TEZ5 329 aa12.91□□□□□ -0.34
RAD50-201ENST00000378823 IKBKGQ9Y6K9 419 aa12.91□□□□□ -0.34
RAD50-201ENST00000378823 IFI16Q16666 785 aaKnown RBP12.91□□□□□ -0.34
RAD50-201ENST00000378823 EHMT1Q9H9B1 1298 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms