RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 ADCK5Q3MIX3 580 aa13.85□□□□□ -0.19
SEC23B-204ENST00000377475 ABCC3O15438 1527 aa13.85□□□□□ -0.19
SEC23B-204ENST00000377475 BRD1O95696 1058 aa13.85□□□□□ -0.19
SEC23B-204ENST00000377475 GUCY1B3Q02153 619 aa13.85□□□□□ -0.19
SEC23B-204ENST00000377475 ZNF530Q6P9A1 599 aaPredicted RBP13.85□□□□□ -0.19
SEC23B-204ENST00000377475 PDCL3Q9H2J4 239 aa13.85□□□□□ -0.19
SEC23B-204ENST00000377475 CAMSAP1Q5T5Y3 1602 aa13.85□□□□□ -0.19
SEC23B-204ENST00000377475 ZFYVE9O95405 1425 aa13.85□□□□□ -0.19
SEC23B-204ENST00000377475 RIMBP3CA6NJZ7 1639 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 RIMBP3BA6NNM3 1639 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 RIMBP3Q9UFD9 1639 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 STK11IPQ8N1F8 1099 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 ZBTB9Q96C00 473 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 PTCH1Q13635 1447 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 RAB11FIP3O75154 756 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 MCM2P49736 904 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 PTH1RQ03431 593 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 SNX14Q9Y5W7 946 aa13.84□□□□□ -0.19
SEC23B-204ENST00000377475 BTBD11A6QL63 1104 aa13.83□□□□□ -0.19
SEC23B-204ENST00000377475 CHAF1AQ13111 956 aaPredicted RBP13.83□□□□□ -0.19
SEC23B-204ENST00000377475 FAM227BQ96M60 508 aa13.83□□□□□ -0.19
SEC23B-204ENST00000377475 CCDC85AQ96PX6 553 aaPredicted RBP13.83□□□□□ -0.19
SEC23B-204ENST00000377475 TRIM5Q9C035 493 aa13.83□□□□□ -0.19
SEC23B-204ENST00000377475 NCOA3Q9Y6Q9 1424 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 CD163L1Q9NR16 1453 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 LTKP29376 864 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 PSME1Q06323 249 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 G3BP1Q13283 466 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■■□ 22
SEC23B-204ENST00000377475 SLC39A6Q13433 755 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 ESCO1Q5FWF5 840 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 ERCC4Q92889 916 aaPredicted RBP13.83□□□□□ -0.2
SEC23B-204ENST00000377475 FMNL2Q96PY5 1086 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 H3BQV1 296 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.2
SEC23B-204ENST00000377475 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 LIMCH1Q9UPQ0 1083 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.83□□□□□ -0.2
SEC23B-204ENST00000377475 CYP46A1Q9Y6A2 500 aa13.83□□□□□ -0.2
SEC23B-204ENST00000377475 UHRF1BP1LA0JNW5 1464 aa13.82□□□□□ -0.2
SEC23B-204ENST00000377475 CYP2E1P05181 493 aaPredicted RBP13.82□□□□□ -0.2
SEC23B-204ENST00000377475 ZSCAN22P10073 491 aaPredicted RBP13.82□□□□□ -0.2
SEC23B-204ENST00000377475 RIC3Q7Z5B4 369 aa13.82□□□□□ -0.2
SEC23B-204ENST00000377475 DNAAF4Q8WXU2 420 aa13.82□□□□□ -0.2
SEC23B-204ENST00000377475 KIF1BPQ96EK5 621 aa13.82□□□□□ -0.2
SEC23B-204ENST00000377475 NEUROD6Q96NK8 337 aa13.82□□□□□ -0.2
SEC23B-204ENST00000377475 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
SEC23B-204ENST00000377475 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
SEC23B-204ENST00000377475 KIDINS220Q9ULH0 1771 aa13.82□□□□□ -0.2
SEC23B-204ENST00000377475 LUZP1Q86V48 1076 aa13.81□□□□□ -0.2
SEC23B-204ENST00000377475 C16orf45Q96MC5 204 aaPredicted RBP13.81□□□□□ -0.2
SEC23B-204ENST00000377475 COL3A1P02461 1466 aaPredicted RBP13.81□□□□□ -0.2
SEC23B-204ENST00000377475 NRXN1Q9ULB1 1477 aa13.81□□□□□ -0.2
SEC23B-204ENST00000377475 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.2
SEC23B-204ENST00000377475 MROH1Q8NDA8 1641 aa13.81□□□□□ -0.2
SEC23B-204ENST00000377475 PTPRMP28827 1452 aa13.81□□□□□ -0.2
SEC23B-204ENST00000377475 CHGBP05060 677 aa13.81□□□□□ -0.2
SEC23B-204ENST00000377475 ZC3H6P61129 1189 aaKnown RBP13.81□□□□□ -0.2
SEC23B-204ENST00000377475 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
SEC23B-204ENST00000377475 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
SEC23B-204ENST00000377475 CCDC183Q5T5S1 534 aa13.81□□□□□ -0.2
SEC23B-204ENST00000377475 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
SEC23B-204ENST00000377475 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.81□□□□□ -0.2
SEC23B-204ENST00000377475 EDC4Q6P2E9 1401 aaKnown RBP13.81□□□□□ -0.2
SEC23B-204ENST00000377475 CSB-PGBD3P0DP91 1061 aa13.8□□□□□ -0.2
SEC23B-204ENST00000377475 ATP10DQ9P241 1426 aa13.8□□□□□ -0.2
SEC23B-204ENST00000377475 GPATCH3Q96I76 525 aa13.8□□□□□ -0.2
SEC23B-204ENST00000377475 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
SEC23B-204ENST00000377475 COL9A3Q14050 684 aaPredicted RBP13.8□□□□□ -0.2
SEC23B-204ENST00000377475 CHST3Q7LGC8 479 aa13.8□□□□□ -0.2
SEC23B-204ENST00000377475 FAM184AQ8NB25 1140 aa13.8□□□□□ -0.2
SEC23B-204ENST00000377475 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.8□□□□□ -0.2
SEC23B-204ENST00000377475 V9GYY5 206 aaPredicted RBP13.8□□□□□ -0.2
SEC23B-204ENST00000377475 PROSER3Q2NL68 480 aa13.79□□□□□ -0.2
SEC23B-204ENST00000377475 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
SEC23B-204ENST00000377475 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
SEC23B-204ENST00000377475 ATP6V1DQ9Y5K8 247 aa13.79□□□□□ -0.2
SEC23B-204ENST00000377475 SETD1BQ9UPS6 1966 aaKnown RBP13.79□□□□□ -0.2
SEC23B-204ENST00000377475 F13A1P00488 732 aa13.79□□□□□ -0.2
SEC23B-204ENST00000377475 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
SEC23B-204ENST00000377475 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
SEC23B-204ENST00000377475 ATP5J2-PTCD1G3V325 749 aa13.78□□□□□ -0.2
SEC23B-204ENST00000377475 PTCD1O75127 700 aaKnown RBP13.78□□□□□ -0.2
SEC23B-204ENST00000377475 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
SEC23B-204ENST00000377475 CCT2P78371 535 aaKnown RBP13.78□□□□□ -0.2
SEC23B-204ENST00000377475 CCDC129Q6ZRS4 1044 aa13.78□□□□□ -0.2
SEC23B-204ENST00000377475 TNMDQ9H2S6 317 aa13.78□□□□□ -0.2
SEC23B-204ENST00000377475 CPS1P31327 1500 aa13.78□□□□□ -0.2
SEC23B-204ENST00000377475 PTGS1P23219 599 aa13.78□□□□□ -0.2
SEC23B-204ENST00000377475 RBM8AQ9Y5S9 174 aaKnown RBP13.78□□□□□ -0.2
SEC23B-204ENST00000377475 SGSM2O43147 1006 aa13.77□□□□□ -0.2
SEC23B-204ENST00000377475 DACT1Q9NYF0 836 aa13.77□□□□□ -0.2
SEC23B-204ENST00000377475 LRMPQ12912 555 aa13.77□□□□□ -0.21
SEC23B-204ENST00000377475 SLFNL1Q499Z3 407 aa13.77□□□□□ -0.21
SEC23B-204ENST00000377475 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
SEC23B-204ENST00000377475 SPATA32Q96LK8 384 aa13.77□□□□□ -0.21
SEC23B-204ENST00000377475 TLR7Q9NYK1 1049 aaKnown RBP13.77□□□□□ -0.21
SEC23B-204ENST00000377475 NMIQ13287 307 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms