RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 NWD1Q149M9 1564 aa24.72■■□□□ 1.55
CLN5-201ENST00000377453 RHPN1Q8TCX5 695 aa24.72■■□□□ 1.55
CLN5-201ENST00000377453 SSH3Q8TE77 659 aa24.72■■□□□ 1.55
CLN5-201ENST00000377453 DDX54Q8TDD1 881 aaKnown RBP24.71■■□□□ 1.55
CLN5-201ENST00000377453 SPG7Q9UQ90 795 aa24.71■■□□□ 1.55
CLN5-201ENST00000377453 LRSAM1Q6UWE0 723 aa24.71■■□□□ 1.55
CLN5-201ENST00000377453 PI4K2BQ8TCG2 481 aa24.71■■□□□ 1.55
CLN5-201ENST00000377453 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.71■■□□□ 1.55
CLN5-201ENST00000377453 PI4KAP2A4QPH2 592 aa24.7■■□□□ 1.55
CLN5-201ENST00000377453 MSNP26038 577 aaKnown RBP24.7■■□□□ 1.55
CLN5-201ENST00000377453 KIAA1211Q6ZU35 1233 aa24.7■■□□□ 1.55
CLN5-201ENST00000377453 RASEFQ8IZ41 740 aa24.7■■□□□ 1.55
CLN5-201ENST00000377453 PI4KAP1Q8N8J0 262 aa24.7■■□□□ 1.55
CLN5-201ENST00000377453 SRCIN1Q9C0H9 1055 aa24.7■■□□□ 1.55
CLN5-201ENST00000377453 HTATSF1O43719 755 aaKnown RBP24.7■■□□□ 1.54
CLN5-201ENST00000377453 XPCQ01831 940 aaPredicted RBP24.69■■□□□ 1.54
CLN5-201ENST00000377453 NBPF6Q5VWK0 638 aa24.69■■□□□ 1.54
CLN5-201ENST00000377453 CWC27Q6UX04 472 aaKnown RBP24.69■■□□□ 1.54
CLN5-201ENST00000377453 LRRC59Q96AG4 307 aaKnown RBP24.69■■□□□ 1.54
CLN5-201ENST00000377453 NBPF4Q96M43 638 aa24.69■■□□□ 1.54
CLN5-201ENST00000377453 TUBGCP6Q96RT7 1819 aa24.69■■□□□ 1.54
CLN5-201ENST00000377453 TBX22Q9Y458 520 aa24.68■■□□□ 1.54
CLN5-201ENST00000377453 SETD1BQ9UPS6 1966 aaKnown RBP24.67■■□□□ 1.54
CLN5-201ENST00000377453 HSPA4P34932 840 aa24.67■■□□□ 1.54
CLN5-201ENST00000377453 LRRC37A3O60309 1634 aa24.67■■□□□ 1.54
CLN5-201ENST00000377453 MCM2P49736 904 aa24.66■■□□□ 1.54
CLN5-201ENST00000377453 MPRIPQ6WCQ1 1025 aa24.66■■□□□ 1.54
CLN5-201ENST00000377453 ANAPC15P60006 121 aa24.66■■□□□ 1.54
CLN5-201ENST00000377453 EIF4A1P60842 406 aaKnown RBP24.66■■□□□ 1.54
CLN5-201ENST00000377453 USP48Q86UV5 1035 aa24.66■■□□□ 1.54
CLN5-201ENST00000377453 SNX14Q9Y5W7 946 aa24.66■■□□□ 1.54
CLN5-201ENST00000377453 PRAMEF22A3QJZ6 481 aa24.65■■□□□ 1.54
CLN5-201ENST00000377453 POLA2Q14181 598 aa24.65■■□□□ 1.54
CLN5-201ENST00000377453 UBE2Q2Q8WVN8 375 aa24.65■■□□□ 1.54
CLN5-201ENST00000377453 PDLIM2Q96JY6 352 aa24.65■■□□□ 1.54
CLN5-201ENST00000377453 PA2G4Q9UQ80 394 aaKnown RBP24.65■■□□□ 1.54
CLN5-201ENST00000377453 SGSM2O43147 1006 aa24.64■■□□□ 1.54
CLN5-201ENST00000377453 LARGE1O95461 756 aa24.64■■□□□ 1.54
CLN5-201ENST00000377453 OS9Q13438 667 aaPredicted RBP24.64■■□□□ 1.54
CLN5-201ENST00000377453 BEND3Q5T5X7 828 aa24.64■■□□□ 1.54
CLN5-201ENST00000377453 PROSER3Q2NL68 480 aa24.64■■□□□ 1.53
CLN5-201ENST00000377453 CNPY2Q9Y2B0 182 aa24.64■■□□□ 1.53
CLN5-201ENST00000377453 AK2P54819 239 aa24.63■■□□□ 1.53
CLN5-201ENST00000377453 DNAAF4Q8WXU2 420 aa24.63■■□□□ 1.53
CLN5-201ENST00000377453 RPAP1Q9BWH6 1393 aaPredicted RBP24.63■■□□□ 1.53
CLN5-201ENST00000377453 HSP90AA2PQ14568 343 aaPredicted RBP24.63■■□□□ 1.53
CLN5-201ENST00000377453 LSG1Q9H089 658 aaKnown RBP24.63■■□□□ 1.53
CLN5-201ENST00000377453 FER1L4A9Z1Z3 1794 aa24.62■■□□□ 1.53
CLN5-201ENST00000377453 INTS4Q96HW7 963 aaKnown RBP24.62■■□□□ 1.53
CLN5-201ENST00000377453 RUFY3Q7L099 469 aa24.62■■□□□ 1.53
CLN5-201ENST00000377453 R3HCC1Q9Y3T6 440 aaKnown RBP24.62■■□□□ 1.53
CLN5-201ENST00000377453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.62■■□□□ 1.53
CLN5-201ENST00000377453 RAD50Q92878 1312 aa24.61■■□□□ 1.53
CLN5-201ENST00000377453 MBD3O95983 291 aa24.61■■□□□ 1.53
CLN5-201ENST00000377453 COL9A3Q14050 684 aaPredicted RBP24.61■■□□□ 1.53
CLN5-201ENST00000377453 PTH1RQ03431 593 aa24.61■■□□□ 1.53
CLN5-201ENST00000377453 KIF1BPQ96EK5 621 aa24.61■■□□□ 1.53
CLN5-201ENST00000377453 CWF19L2Q2TBE0 894 aaKnown RBP24.6■■□□□ 1.53
CLN5-201ENST00000377453 NOL7Q9UMY1 257 aaKnown RBP24.6■■□□□ 1.53
CLN5-201ENST00000377453 RAB11FIP3O75154 756 aa24.59■■□□□ 1.53
CLN5-201ENST00000377453 OFD1O75665 1012 aa24.59■■□□□ 1.53
CLN5-201ENST00000377453 THEMISQ8N1K5 641 aaPredicted RBP24.59■■□□□ 1.53
CLN5-201ENST00000377453 ADCK5Q3MIX3 580 aa24.59■■□□□ 1.53
CLN5-201ENST00000377453 ZNF530Q6P9A1 599 aaPredicted RBP24.59■■□□□ 1.53
CLN5-201ENST00000377453 TSPY26PQ9H489 355 aa24.59■■□□□ 1.53
CLN5-201ENST00000377453 ADCY9O60503 1353 aa24.59■■□□□ 1.53
CLN5-201ENST00000377453 MARF1Q9Y4F3 1742 aaKnown RBP24.58■■□□□ 1.53
CLN5-201ENST00000377453 BTBD11A6QL63 1104 aa24.58■■□□□ 1.53
CLN5-201ENST00000377453 CASTP20810 708 aaKnown RBP24.58■■□□□ 1.52
CLN5-201ENST00000377453 CNTROBQ8N137 903 aa24.58■■□□□ 1.52
CLN5-201ENST00000377453 TTC14Q96N46 770 aa24.58■■□□□ 1.52
CLN5-201ENST00000377453 AOX1Q06278 1338 aa24.58■■□□□ 1.52
CLN5-201ENST00000377453 RBM10P98175 930 aaKnown RBP24.57■■□□□ 1.52
CLN5-201ENST00000377453 TEFQ10587 303 aa24.57■■□□□ 1.52
CLN5-201ENST00000377453 PHF8Q9UPP1 1060 aa24.57■■□□□ 1.52
CLN5-201ENST00000377453 CEMIPQ8WUJ3 1361 aa24.56■■□□□ 1.52
CLN5-201ENST00000377453 FIBPO43427 364 aa24.56■■□□□ 1.52
CLN5-201ENST00000377453 MAP3K2Q9Y2U5 619 aa24.56■■□□□ 1.52
CLN5-201ENST00000377453 PRPF40BQ6NWY9 871 aaKnown RBP24.56■■□□□ 1.52
CLN5-201ENST00000377453 CCDC83Q8IWF9 413 aa24.56■■□□□ 1.52
CLN5-201ENST00000377453 PXDNLA1KZ92 1463 aa24.56■■□□□ 1.52
CLN5-201ENST00000377453 WDR33Q9C0J8 1336 aaKnown RBP24.56■■□□□ 1.52
CLN5-201ENST00000377453 IP6K1Q92551 441 aa24.55■■□□□ 1.52
CLN5-201ENST00000377453 ZNF830Q96NB3 372 aaPredicted RBP24.55■■□□□ 1.52
CLN5-201ENST00000377453 SYT1P21579 422 aa24.54■■□□□ 1.52
CLN5-201ENST00000377453 TCHHQ07283 1943 aa24.54■■□□□ 1.52
CLN5-201ENST00000377453 AIMP1Q12904 312 aaKnown RBP24.54■■□□□ 1.52
CLN5-201ENST00000377453 DIAPH3Q9NSV4 1193 aa24.54■■□□□ 1.52
CLN5-201ENST00000377453 ZKSCAN5Q9Y2L8 839 aa24.54■■□□□ 1.52
CLN5-201ENST00000377453 LMOD2Q6P5Q4 547 aa24.53■■□□□ 1.52
CLN5-201ENST00000377453 ARHGAP23Q9P227 1491 aa24.53■■□□□ 1.52
CLN5-201ENST00000377453 IL17RAQ96F46 866 aa24.53■■□□□ 1.52
CLN5-201ENST00000377453 JAKMIP1Q96N16 626 aaKnown RBP24.53■■□□□ 1.52
CLN5-201ENST00000377453 C9orf78Q9NZ63 289 aaPredicted RBP24.53■■□□□ 1.52
CLN5-201ENST00000377453 ESCO1Q5FWF5 840 aa24.52■■□□□ 1.52
CLN5-201ENST00000377453 NECAB1Q8N987 351 aa24.52■■□□□ 1.52
CLN5-201ENST00000377453 PTMAP06454 111 aaKnown RBP24.52■■□□□ 1.52
CLN5-201ENST00000377453 TCEANC2Q96MN5 208 aa24.52■■□□□ 1.52
CLN5-201ENST00000377453 SLIT1O75093 1534 aa24.52■■□□□ 1.52
CLN5-201ENST00000377453 ZSCAN22P10073 491 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms