RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 TCEANC2Q96MN5 208 aa14.46□□□□□ -0.1
SF1-204ENST00000377390 RIMS2Q9UQ26 1411 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 ABCC4O15439 1325 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 TAF3Q5VWG9 929 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 MPRIPQ6WCQ1 1025 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 GOLGB1Q14789 3259 aaKnown RBP14.45□□□□□ -0.1
SF1-204ENST00000377390 TIGD1Q96MW7 591 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 TNMDQ9H2S6 317 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 RPGRIP1LQ68CZ1 1315 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 CHMLP26374 656 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 GORABQ5T7V8 394 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 LARP1BQ659C4 914 aaKnown RBP14.45□□□□□ -0.1
SF1-204ENST00000377390 UNC5CLQ8IV45 518 aa14.45□□□□□ -0.1
SF1-204ENST00000377390 BECN2A8MW95 431 aa14.44□□□□□ -0.1
SF1-204ENST00000377390 JAKMIP1Q96N16 626 aaKnown RBP14.44□□□□□ -0.1
SF1-204ENST00000377390 NUP62CLQ9H1M0 184 aa14.44□□□□□ -0.1
SF1-204ENST00000377390 NRBP1Q9UHY1 535 aa14.44□□□□□ -0.1
SF1-204ENST00000377390 YTHDC2Q9H6S0 1430 aaKnown RBP14.44□□□□□ -0.1
SF1-204ENST00000377390 GJB2P29033 226 aa14.44□□□□□ -0.1
SF1-204ENST00000377390 GTF2F1P35269 517 aaKnown RBP eCLIP14.43□□□□□ -0.1
SF1-204ENST00000377390 IRX5P78411 483 aaPredicted RBP14.43□□□□□ -0.1
SF1-204ENST00000377390 MSH6P52701 1360 aa14.43□□□□□ -0.1
SF1-204ENST00000377390 PLXNC1O60486 1568 aa14.43□□□□□ -0.1
SF1-204ENST00000377390 AK2P54819 239 aa14.43□□□□□ -0.1
SF1-204ENST00000377390 MAP3K11Q16584 847 aa14.43□□□□□ -0.1
SF1-204ENST00000377390 STRN4Q9NRL3 753 aa14.43□□□□□ -0.1
SF1-204ENST00000377390 EIF4A2Q14240 407 aaKnown RBP14.43□□□□□ -0.1
SF1-204ENST00000377390 SYTL4Q96C24 671 aaPredicted RBP14.43□□□□□ -0.1
SF1-204ENST00000377390 ZRSR1Q15695 479 aaKnown RBP14.42□□□□□ -0.1
SF1-204ENST00000377390 TAF7LQ5H9L4 462 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 KIAA1524Q8TCG1 905 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 MADDQ8WXG6 1647 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 PPFIA3O75145 1194 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 OGFRQ9NZT2 677 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 LRRFIP2Q9Y608 721 aaKnown RBP14.42□□□□□ -0.1
SF1-204ENST00000377390 F13A1P00488 732 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 INTS4Q96HW7 963 aaKnown RBP14.42□□□□□ -0.1
SF1-204ENST00000377390 LIMCH1Q9UPQ0 1083 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 PRR36Q9H6K5 1346 aa14.42□□□□□ -0.1
SF1-204ENST00000377390 CEP152O94986 1710 aa14.41□□□□□ -0.1
SF1-204ENST00000377390 POLR3GO15318 223 aaPredicted RBP14.41□□□□□ -0.1
SF1-204ENST00000377390 ANO6Q4KMQ2 910 aa14.41□□□□□ -0.1
SF1-204ENST00000377390 PRPF40BQ6NWY9 871 aaKnown RBP14.41□□□□□ -0.1
SF1-204ENST00000377390 PNMA6EA0A0J9YXQ4 647 aa14.41□□□□□ -0.1
SF1-204ENST00000377390 NSD2O96028 1365 aa14.41□□□□□ -0.1
SF1-204ENST00000377390 TPM3P06753 285 aa14.41□□□□□ -0.1
SF1-204ENST00000377390 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
SF1-204ENST00000377390 FMNL2Q96PY5 1086 aa14.41□□□□□ -0.1
SF1-204ENST00000377390 DACT1Q9NYF0 836 aa14.4□□□□□ -0.1
SF1-204ENST00000377390 KRT85P78386 507 aa14.4□□□□□ -0.1
SF1-204ENST00000377390 CCDC85AQ96PX6 553 aaPredicted RBP14.4□□□□□ -0.1
SF1-204ENST00000377390 CLIP2Q9UDT6 1046 aa14.4□□□□□ -0.1
SF1-204ENST00000377390 UBTFL1P0CB47 393 aaPredicted RBP14.4□□□□□ -0.1
SF1-204ENST00000377390 MYL6BP14649 208 aa14.4□□□□□ -0.1
SF1-204ENST00000377390 TNRQ92752 1358 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 ST7Q9NRC1 585 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 PDRG1Q9NUG6 133 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 LAMC1P11047 1609 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 DNAJC25Q9H1X3 360 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 KCNF1Q9H3M0 494 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 HSP90B1P14625 803 aaKnown RBP14.39□□□□□ -0.11
SF1-204ENST00000377390 ZNF165P49910 485 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 TEFQ10587 303 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 CUL4AQ13619 759 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 GTF3C6Q969F1 213 aa14.39□□□□□ -0.11
SF1-204ENST00000377390 TYRO3Q06418 890 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 CHMP4CQ96CF2 233 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 UHRF1BP1LA0JNW5 1464 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 H3BQV1 296 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 AP5Z1O43299 807 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 ZKSCAN1P17029 563 aaPredicted RBP14.38□□□□□ -0.11
SF1-204ENST00000377390 IFFO2Q5TF58 517 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 FAM200AQ8TCP9 573 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 SPATA32Q96LK8 384 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 TTC21BQ7Z4L5 1316 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 GNAI3P08754 354 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 SLC39A6Q13433 755 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 HOMER1Q86YM7 354 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 FEZ1Q99689 392 aa14.38□□□□□ -0.11
SF1-204ENST00000377390 RTL1A6NKG5 1358 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 LIG1P18858 919 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 CCT4P50991 539 aaKnown RBP14.37□□□□□ -0.11
SF1-204ENST00000377390 IRX3P78415 501 aaPredicted RBP14.37□□□□□ -0.11
SF1-204ENST00000377390 PTPN14Q15678 1187 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 MTHFSDQ2M296 383 aaKnown RBP14.37□□□□□ -0.11
SF1-204ENST00000377390 NCBP3Q53F19 620 aaKnown RBP14.37□□□□□ -0.11
SF1-204ENST00000377390 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 SRGAP3O43295 1099 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 SKIDA1Q1XH10 827 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 KRT222Q8N1A0 295 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 DDX11Q96FC9 970 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 CYP46A1Q9Y6A2 500 aa14.37□□□□□ -0.11
SF1-204ENST00000377390 CNTROBQ8N137 903 aa14.36□□□□□ -0.11
SF1-204ENST00000377390 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
SF1-204ENST00000377390 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
SF1-204ENST00000377390 NCBP1Q09161 790 aaKnown RBP14.36□□□□□ -0.11
SF1-204ENST00000377390 A0A087WWV3 80 aa14.36□□□□□ -0.11
SF1-204ENST00000377390 ANAPC15P60006 121 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms