RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SRCIN1Q9C0H9 1055 aa15.77■□□□□ 0.12
CLCN6-206ENST00000376496 GNAI2P04899 355 aa15.77■□□□□ 0.11
CLCN6-206ENST00000376496 NBPF7P0C2Y1 421 aaPredicted RBP15.77■□□□□ 0.11
CLCN6-206ENST00000376496 CWF19L2Q2TBE0 894 aaKnown RBP15.77■□□□□ 0.11
CLCN6-206ENST00000376496 CCDC9Q9Y3X0 531 aaKnown RBP15.77■□□□□ 0.11
CLCN6-206ENST00000376496 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
CLCN6-206ENST00000376496 BEND3Q5T5X7 828 aa15.76■□□□□ 0.11
CLCN6-206ENST00000376496 C16orf71Q8IYS4 520 aaPredicted RBP15.76■□□□□ 0.11
CLCN6-206ENST00000376496 GCC1Q96CN9 775 aa15.76■□□□□ 0.11
CLCN6-206ENST00000376496 DDX21Q9NR30 783 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLCN6-206ENST00000376496 PNMA6EA0A0J9YXQ4 647 aa15.76■□□□□ 0.11
CLCN6-206ENST00000376496 RPAP2Q8IXW5 612 aaPredicted RBP15.76■□□□□ 0.11
CLCN6-206ENST00000376496 XAGE3Q8WTP9 111 aa15.76■□□□□ 0.11
CLCN6-206ENST00000376496 NKX1-1Q15270 411 aaPredicted RBP15.75■□□□□ 0.11
CLCN6-206ENST00000376496 DCTPP1Q9H773 170 aa15.75■□□□□ 0.11
CLCN6-206ENST00000376496 A0A0G2JS52 829 aa15.75■□□□□ 0.11
CLCN6-206ENST00000376496 COPS6Q7L5N1 327 aa15.75■□□□□ 0.11
CLCN6-206ENST00000376496 ERVV-2B6SEH9 535 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 OTUD7AQ8TE49 926 aaPredicted RBP15.74■□□□□ 0.11
CLCN6-206ENST00000376496 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 EXOC6BQ9Y2D4 811 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 PLCH1Q4KWH8 1693 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 UBTFL1P0CB47 393 aaPredicted RBP15.74■□□□□ 0.11
CLCN6-206ENST00000376496 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
CLCN6-206ENST00000376496 SYTL4Q96C24 671 aaPredicted RBP15.74■□□□□ 0.11
CLCN6-206ENST00000376496 ASAP1Q9ULH1 1129 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 GNAI3P08754 354 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 KSR2Q6VAB6 950 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
CLCN6-206ENST00000376496 ANP32AP39687 249 aaKnown RBP15.73■□□□□ 0.11
CLCN6-206ENST00000376496 PIGBQ92521 554 aa15.73■□□□□ 0.11
CLCN6-206ENST00000376496 C8orf37Q96NL8 207 aa15.73■□□□□ 0.11
CLCN6-206ENST00000376496 DISP2A7MBM2 1401 aa15.73■□□□□ 0.11
CLCN6-206ENST00000376496 PLEKHG2Q9H7P9 1386 aa15.72■□□□□ 0.11
CLCN6-206ENST00000376496 A1BGP04217 495 aa15.72■□□□□ 0.11
CLCN6-206ENST00000376496 RIC3Q7Z5B4 369 aa15.72■□□□□ 0.11
CLCN6-206ENST00000376496 JARID2Q92833 1246 aaPredicted RBP15.72■□□□□ 0.11
CLCN6-206ENST00000376496 EXOC5O00471 708 aa15.72■□□□□ 0.11
CLCN6-206ENST00000376496 GLI3P10071 1580 aa15.72■□□□□ 0.11
CLCN6-206ENST00000376496 NBPF26B4DH59 902 aa15.71■□□□□ 0.11
CLCN6-206ENST00000376496 NBPF14Q5TI25 921 aa15.71■□□□□ 0.11
CLCN6-206ENST00000376496 NBPF10Q6P3W6 841 aaKnown RBP15.71■□□□□ 0.11
CLCN6-206ENST00000376496 NBPF15Q8N660 670 aa15.71■□□□□ 0.11
CLCN6-206ENST00000376496 CHMP4AQ9BY43 222 aa15.71■□□□□ 0.11
CLCN6-206ENST00000376496 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.11
CLCN6-206ENST00000376496 LRP10Q7Z4F1 713 aa15.71■□□□□ 0.11
CLCN6-206ENST00000376496 SPATA31A1Q5TZJ5 1347 aa15.71■□□□□ 0.11
CLCN6-206ENST00000376496 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
CLCN6-206ENST00000376496 ATP8B2P98198 1209 aa15.7■□□□□ 0.1
CLCN6-206ENST00000376496 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
CLCN6-206ENST00000376496 KCPQ6ZWJ8 1503 aa15.69■□□□□ 0.1
CLCN6-206ENST00000376496 ACSBG1Q96GR2 724 aa15.69■□□□□ 0.1
CLCN6-206ENST00000376496 MYD88Q99836 296 aa15.69■□□□□ 0.1
CLCN6-206ENST00000376496 C9orf78Q9NZ63 289 aaPredicted RBP15.69■□□□□ 0.1
CLCN6-206ENST00000376496 HMMRO75330 724 aa15.69■□□□□ 0.1
CLCN6-206ENST00000376496 IGKV5-2P06315 115 aa15.69■□□□□ 0.1
CLCN6-206ENST00000376496 PPP1R42Q7Z4L9 355 aa15.69■□□□□ 0.1
CLCN6-206ENST00000376496 NGLY1Q96IV0 654 aa15.69■□□□□ 0.1
CLCN6-206ENST00000376496 N4BP2Q86UW6 1770 aaPredicted RBP15.68■□□□□ 0.1
CLCN6-206ENST00000376496 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
CLCN6-206ENST00000376496 DDX58O95786 925 aaKnown RBP15.68■□□□□ 0.1
CLCN6-206ENST00000376496 ATG3Q9NT62 314 aa15.68■□□□□ 0.1
CLCN6-206ENST00000376496 PRIM1P49642 420 aaKnown RBP15.68■□□□□ 0.1
CLCN6-206ENST00000376496 TTLL7Q6ZT98 887 aa15.68■□□□□ 0.1
CLCN6-206ENST00000376496 ANKRD13DQ6ZTN6 518 aa15.67■□□□□ 0.1
CLCN6-206ENST00000376496 NRAPQ86VF7 1730 aa15.67■□□□□ 0.1
CLCN6-206ENST00000376496 DDB1Q16531 1140 aa15.67■□□□□ 0.1
CLCN6-206ENST00000376496 TSHZ3Q63HK5 1081 aa15.67■□□□□ 0.1
CLCN6-206ENST00000376496 PLEKHM2Q8IWE5 1019 aa15.67■□□□□ 0.1
CLCN6-206ENST00000376496 DNAJC10Q8IXB1 793 aa15.67■□□□□ 0.1
CLCN6-206ENST00000376496 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
CLCN6-206ENST00000376496 SRGAP3O43295 1099 aa15.67■□□□□ 0.1
CLCN6-206ENST00000376496 SPATA31A5Q5VU36 1347 aa15.66■□□□□ 0.1
CLCN6-206ENST00000376496 SPATA31A7Q8IWB4 1347 aa15.66■□□□□ 0.1
CLCN6-206ENST00000376496 LINS1Q8NG48 757 aa15.66■□□□□ 0.1
CLCN6-206ENST00000376496 ITGB4P16144 1822 aa15.66■□□□□ 0.1
CLCN6-206ENST00000376496 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
CLCN6-206ENST00000376496 CERKQ8TCT0 537 aa15.66■□□□□ 0.1
CLCN6-206ENST00000376496 UBR2Q8IWV8 1755 aa15.66■□□□□ 0.1
CLCN6-206ENST00000376496 MARCH10Q8NA82 808 aaPredicted RBP15.65■□□□□ 0.1
CLCN6-206ENST00000376496 IPO9Q96P70 1041 aaKnown RBP15.65■□□□□ 0.1
CLCN6-206ENST00000376496 ZBTB3Q9H5J0 574 aa15.65■□□□□ 0.1
CLCN6-206ENST00000376496 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
CLCN6-206ENST00000376496 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
CLCN6-206ENST00000376496 SLC4A9Q96Q91 983 aa15.65■□□□□ 0.1
CLCN6-206ENST00000376496 ARXQ96QS3 562 aa15.65■□□□□ 0.1
CLCN6-206ENST00000376496 IL1RAPL2Q9NP60 686 aa15.65■□□□□ 0.1
CLCN6-206ENST00000376496 GSPT1P15170 499 aaKnown RBP15.64■□□□□ 0.09
CLCN6-206ENST00000376496 PAPPAQ13219 1627 aa15.64■□□□□ 0.09
CLCN6-206ENST00000376496 TNS2Q63HR2 1409 aa15.64■□□□□ 0.09
CLCN6-206ENST00000376496 SLIT2O94813 1529 aa15.64■□□□□ 0.09
CLCN6-206ENST00000376496 NEURL1BA8MQ27 555 aa15.64■□□□□ 0.09
CLCN6-206ENST00000376496 GRM8O00222 908 aa15.64■□□□□ 0.09
CLCN6-206ENST00000376496 SURF6O75683 361 aaKnown RBP15.64■□□□□ 0.09
CLCN6-206ENST00000376496 ALDH1L1O75891 902 aa15.64■□□□□ 0.09
CLCN6-206ENST00000376496 SLC4A3P48751 1232 aa15.64■□□□□ 0.09
CLCN6-206ENST00000376496 MFAP1P55081 439 aaKnown RBP15.64■□□□□ 0.09
CLCN6-206ENST00000376496 MYT1Q01538 1121 aa15.64■□□□□ 0.09
CLCN6-206ENST00000376496 KAZALD1Q96I82 304 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms