RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 IMMTQ16891 758 aaKnown RBP12.89□□□□□ -0.35
MDC1-201ENST00000376406 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
MDC1-201ENST00000376406 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
MDC1-201ENST00000376406 CT47A1Q5JQC4 288 aaPredicted RBP12.88□□□□□ -0.35
MDC1-201ENST00000376406 NBPF14Q5TI25 921 aa12.88□□□□□ -0.35
MDC1-201ENST00000376406 TNIP1Q15025 636 aa12.88□□□□□ -0.35
MDC1-201ENST00000376406 BMP2KLQ5H9B9 411 aa12.88□□□□□ -0.35
MDC1-201ENST00000376406 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
MDC1-201ENST00000376406 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
MDC1-201ENST00000376406 NOL7Q9UMY1 257 aaKnown RBP12.88□□□□□ -0.35
MDC1-201ENST00000376406 ABCC1P33527 1531 aa12.88□□□□□ -0.35
MDC1-201ENST00000376406 SAMD9Q5K651 1589 aa12.88□□□□□ -0.35
MDC1-201ENST00000376406 TBC1D2Q9BYX2 928 aa12.88□□□□□ -0.35
MDC1-201ENST00000376406 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
MDC1-201ENST00000376406 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
MDC1-201ENST00000376406 STIM1Q13586 685 aa12.87□□□□□ -0.35
MDC1-201ENST00000376406 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
MDC1-201ENST00000376406 MTMR7Q9Y216 660 aa12.87□□□□□ -0.35
MDC1-201ENST00000376406 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
MDC1-201ENST00000376406 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
MDC1-201ENST00000376406 MYO6Q9UM54 1294 aa12.87□□□□□ -0.35
MDC1-201ENST00000376406 SMTNL1A8MU46 457 aa12.87□□□□□ -0.35
MDC1-201ENST00000376406 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
MDC1-201ENST00000376406 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
MDC1-201ENST00000376406 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
MDC1-201ENST00000376406 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
MDC1-201ENST00000376406 SYCE3A1L190 88 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 OFD1O75665 1012 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
MDC1-201ENST00000376406 ACEP12821 1306 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 PPFIBP1Q86W92 1011 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 CEP57L1Q8IYX8 460 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 TXLNBQ8N3L3 684 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 MPHOSPH6Q99547 160 aaKnown RBP12.86□□□□□ -0.35
MDC1-201ENST00000376406 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 PIK3C2GO75747 1445 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 CCDC196A0A1B0GTZ2 297 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 LDHCP07864 332 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
MDC1-201ENST00000376406 MAP3K12Q12852 859 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 EHMT1Q9H9B1 1298 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 MYO1BO43795 1136 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 IGHDP01880 384 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 LRRFIP2Q9Y608 721 aaKnown RBP12.86□□□□□ -0.35
MDC1-201ENST00000376406 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 NUCB1Q02818 461 aa12.86□□□□□ -0.35
MDC1-201ENST00000376406 MPHOSPH10O00566 681 aaKnown RBP12.86□□□□□ -0.35
MDC1-201ENST00000376406 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
MDC1-201ENST00000376406 CWC15Q9P013 229 aaKnown RBP12.86□□□□□ -0.35
MDC1-201ENST00000376406 POLR3AO14802 1390 aaPredicted RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 DZIP1Q86YF9 867 aaKnown RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 ESPNB1AK53 854 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 TBC1D9Q6ZT07 1266 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 DNAAF4Q8WXU2 420 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 ZCRB1Q8TBF4 217 aaKnown RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 CEP131Q9UPN4 1083 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 KDM5AP29375 1690 aaKnown RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 SNRPA1P09661 255 aaKnown RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 BCL11BQ9C0K0 894 aaPredicted RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 LUC7LQ9NQ29 371 aaKnown RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 ZFYVE9O95405 1425 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 TRAF1Q13077 416 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 TTLL5Q6EMB2 1281 aa12.85□□□□□ -0.35
MDC1-201ENST00000376406 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
MDC1-201ENST00000376406 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 UQCRHP07919 91 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 AIDAQ96BJ3 306 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 ARHGEF5Q12774 1597 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 DESP17661 470 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
MDC1-201ENST00000376406 CCDC83Q8IWF9 413 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
MDC1-201ENST00000376406 TTC22Q5TAA0 569 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 TBX22Q9Y458 520 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 PLXNC1O60486 1568 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 SOS1Q07889 1333 aaPredicted RBP12.84□□□□□ -0.35
MDC1-201ENST00000376406 POLD1P28340 1107 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 CCDC112Q8NEF3 446 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 MYD88Q99836 296 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 FLIIQ13045 1269 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 CRACR2BQ8N4Y2 399 aaPredicted RBP12.84□□□□□ -0.35
MDC1-201ENST00000376406 RNF41Q9H4P4 317 aaPredicted RBP12.84□□□□□ -0.35
MDC1-201ENST00000376406 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
MDC1-201ENST00000376406 COL17A1Q9UMD9 1497 aaPredicted RBP12.84□□□□□ -0.35
MDC1-201ENST00000376406 BAG3O95817 575 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
MDC1-201ENST00000376406 EVI5LQ96CN4 794 aa12.84□□□□□ -0.35
MDC1-201ENST00000376406 UPF3BQ9BZI7 483 aaKnown RBP12.83□□□□□ -0.35
MDC1-201ENST00000376406 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms