RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 JARID2Q92833 1246 aaPredicted RBP15.75■□□□□ 0.11
MSH5-204ENST00000375755 CCDC94Q9BW85 323 aaPredicted RBP15.75■□□□□ 0.11
MSH5-204ENST00000375755 ZNF335Q9H4Z2 1342 aaPredicted RBP15.75■□□□□ 0.11
MSH5-204ENST00000375755 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
MSH5-204ENST00000375755 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
MSH5-204ENST00000375755 RNF214Q8ND24 703 aa15.74■□□□□ 0.11
MSH5-204ENST00000375755 SLIT3O75094 1523 aa15.74■□□□□ 0.11
MSH5-204ENST00000375755 RGS12O14924 1447 aa15.73■□□□□ 0.11
MSH5-204ENST00000375755 F6X3S4 739 aa15.73■□□□□ 0.11
MSH5-204ENST00000375755 ARHGAP45Q92619 1136 aa15.73■□□□□ 0.11
MSH5-204ENST00000375755 USP26Q9BXU7 913 aa15.73■□□□□ 0.11
MSH5-204ENST00000375755 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
MSH5-204ENST00000375755 DMTNQ08495 405 aa15.73■□□□□ 0.11
MSH5-204ENST00000375755 CHRNA2Q15822 529 aa15.73■□□□□ 0.11
MSH5-204ENST00000375755 MPRIPQ6WCQ1 1025 aa15.73■□□□□ 0.11
MSH5-204ENST00000375755 CWC22Q9HCG8 908 aaKnown RBP15.73■□□□□ 0.11
MSH5-204ENST00000375755 KCNQ3O43525 872 aa15.72■□□□□ 0.11
MSH5-204ENST00000375755 LRRC37A3O60309 1634 aa15.72■□□□□ 0.11
MSH5-204ENST00000375755 ZSCAN20P17040 1043 aaPredicted RBP15.72■□□□□ 0.11
MSH5-204ENST00000375755 TSC1Q92574 1164 aa15.72■□□□□ 0.11
MSH5-204ENST00000375755 KIAA0232Q92628 1395 aa15.72■□□□□ 0.11
MSH5-204ENST00000375755 PXDNQ92626 1479 aa15.72■□□□□ 0.11
MSH5-204ENST00000375755 PDE4CQ08493 712 aa15.71■□□□□ 0.11
MSH5-204ENST00000375755 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.71■□□□□ 0.11
MSH5-204ENST00000375755 KIF1AQ12756 1690 aa15.71■□□□□ 0.11
MSH5-204ENST00000375755 UTP14CQ5TAP6 766 aaKnown RBP15.71■□□□□ 0.11
MSH5-204ENST00000375755 PLEKHM2Q8IWE5 1019 aa15.71■□□□□ 0.11
MSH5-204ENST00000375755 MYRIPQ8NFW9 859 aa15.71■□□□□ 0.11
MSH5-204ENST00000375755 DCCP43146 1447 aa15.71■□□□□ 0.11
MSH5-204ENST00000375755 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
MSH5-204ENST00000375755 FOXD4L5Q5VV16 416 aaPredicted RBP15.7■□□□□ 0.1
MSH5-204ENST00000375755 FOXD4L4Q8WXT5 416 aaPredicted RBP15.7■□□□□ 0.1
MSH5-204ENST00000375755 PTMAP06454 111 aaKnown RBP15.7■□□□□ 0.1
MSH5-204ENST00000375755 ZNF710Q8N1W2 664 aa15.7■□□□□ 0.1
MSH5-204ENST00000375755 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
MSH5-204ENST00000375755 PHRF1Q9P1Y6 1649 aaKnown RBP15.69■□□□□ 0.1
MSH5-204ENST00000375755 TAF7Q15545 349 aaPredicted RBP15.69■□□□□ 0.1
MSH5-204ENST00000375755 CADPS2Q86UW7 1296 aa15.69■□□□□ 0.1
MSH5-204ENST00000375755 API5Q9BZZ5 524 aaKnown RBP15.69■□□□□ 0.1
MSH5-204ENST00000375755 SLC4A10Q6U841 1118 aa15.69■□□□□ 0.1
MSH5-204ENST00000375755 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
MSH5-204ENST00000375755 TTC22Q5TAA0 569 aa15.68■□□□□ 0.1
MSH5-204ENST00000375755 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
MSH5-204ENST00000375755 BRINP3Q76B58 766 aa15.68■□□□□ 0.1
MSH5-204ENST00000375755 MPNDQ8N594 471 aa15.68■□□□□ 0.1
MSH5-204ENST00000375755 DNTTIP2Q5QJE6 756 aaKnown RBP15.67■□□□□ 0.1
MSH5-204ENST00000375755 C16orf71Q8IYS4 520 aaPredicted RBP15.67■□□□□ 0.1
MSH5-204ENST00000375755 ST18O60284 1047 aa15.67■□□□□ 0.1
MSH5-204ENST00000375755 MEIS3Q99687 375 aa15.67■□□□□ 0.1
MSH5-204ENST00000375755 CHMP4BQ9H444 224 aaKnown RBP15.66■□□□□ 0.1
MSH5-204ENST00000375755 ERBB3P21860 1342 aa15.66■□□□□ 0.1
MSH5-204ENST00000375755 NLRP2Q9NX02 1062 aa15.66■□□□□ 0.1
MSH5-204ENST00000375755 TSPY26PQ9H489 355 aa15.66■□□□□ 0.1
MSH5-204ENST00000375755 CEMIPQ8WUJ3 1361 aa15.66■□□□□ 0.1
MSH5-204ENST00000375755 MBD3O95983 291 aa15.65■□□□□ 0.1
MSH5-204ENST00000375755 EIF2S2P20042 333 aaKnown RBP15.65■□□□□ 0.1
MSH5-204ENST00000375755 CBX1P83916 185 aa15.65■□□□□ 0.1
MSH5-204ENST00000375755 INTS3Q68E01 1043 aaKnown RBP15.65■□□□□ 0.1
MSH5-204ENST00000375755 ZNF830Q96NB3 372 aaPredicted RBP15.65■□□□□ 0.1
MSH5-204ENST00000375755 ANXA1P04083 346 aa15.65■□□□□ 0.1
MSH5-204ENST00000375755 NPHP3Q7Z494 1330 aa15.65■□□□□ 0.1
MSH5-204ENST00000375755 OTUD7AQ8TE49 926 aaPredicted RBP15.65■□□□□ 0.1
MSH5-204ENST00000375755 PHAXQ9H814 394 aaKnown RBP15.65■□□□□ 0.1
MSH5-204ENST00000375755 PRAMEF22A3QJZ6 481 aa15.64■□□□□ 0.09
MSH5-204ENST00000375755 BCL11BQ9C0K0 894 aaPredicted RBP15.64■□□□□ 0.09
MSH5-204ENST00000375755 FAM177BA6PVY3 158 aa15.64■□□□□ 0.09
MSH5-204ENST00000375755 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
MSH5-204ENST00000375755 PRIMPOLQ96LW4 560 aa15.64■□□□□ 0.09
MSH5-204ENST00000375755 SPATA31A3Q5VYP0 1347 aa15.63■□□□□ 0.09
MSH5-204ENST00000375755 ATP2B3Q16720 1220 aa15.63■□□□□ 0.09
MSH5-204ENST00000375755 AKAP4Q5JQC9 854 aa15.63■□□□□ 0.09
MSH5-204ENST00000375755 C17orf53Q8N3J3 647 aaPredicted RBP15.63■□□□□ 0.09
MSH5-204ENST00000375755 TNS3Q68CZ2 1445 aa15.63■□□□□ 0.09
MSH5-204ENST00000375755 FAM208AQ9UK61 1670 aaKnown RBP15.63■□□□□ 0.09
MSH5-204ENST00000375755 SDSP20132 328 aa15.63■□□□□ 0.09
MSH5-204ENST00000375755 GTF2F1P35269 517 aaKnown RBP eCLIP15.63■□□□□ 0.097e-15■■■■□ 25.6
MSH5-204ENST00000375755 PIBF1Q8WXW3 757 aa15.63■□□□□ 0.09
MSH5-204ENST00000375755 RNMTO43148 476 aaKnown RBP15.62■□□□□ 0.09
MSH5-204ENST00000375755 FLIIQ13045 1269 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 NOLC1Q14978 699 aaKnown RBP eCLIP15.62■□□□□ 0.09
MSH5-204ENST00000375755 DCTPP1Q9H773 170 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 LMO7Q8WWI1 1683 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 COL18A1P39060 1754 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 PTPRCP08575 1304 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 BTBD11A6QL63 1104 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 CSB-PGBD3P0DP91 1061 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 EIF4A1P60842 406 aaKnown RBP15.62■□□□□ 0.09
MSH5-204ENST00000375755 FKBP5Q13451 457 aaPredicted RBP15.62■□□□□ 0.09
MSH5-204ENST00000375755 SLAIN2Q9P270 581 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 APBB1O00213 710 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 HMGN5P82970 282 aaKnown RBP15.62■□□□□ 0.09
MSH5-204ENST00000375755 BBXQ8WY36 941 aaPredicted RBP15.62■□□□□ 0.09
MSH5-204ENST00000375755 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
MSH5-204ENST00000375755 NCAPD2Q15021 1401 aa15.61■□□□□ 0.09
MSH5-204ENST00000375755 TEFQ10587 303 aa15.61■□□□□ 0.09
MSH5-204ENST00000375755 C1orf141Q5JVX7 400 aa15.61■□□□□ 0.09
MSH5-204ENST00000375755 PPP4R3BQ5MIZ7 849 aa15.61■□□□□ 0.09
MSH5-204ENST00000375755 HDGFL1Q5TGJ6 251 aa15.61■□□□□ 0.09
MSH5-204ENST00000375755 BRD1O95696 1058 aa15.6■□□□□ 0.09
MSH5-204ENST00000375755 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms