RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 KRT24Q2M2I5 525 aa24.67■■□□□ 1.54
COL16A1-201ENST00000373667 CANXP27824 592 aaKnown RBP24.66■■□□□ 1.54
COL16A1-201ENST00000373667 INTS5Q6P9B9 1019 aaKnown RBP24.66■■□□□ 1.54
COL16A1-201ENST00000373667 RTCBQ9Y3I0 505 aaKnown RBP24.66■■□□□ 1.54
COL16A1-201ENST00000373667 A1BGP04217 495 aa24.65■■□□□ 1.54
COL16A1-201ENST00000373667 COL5A3P25940 1745 aaPredicted RBP24.65■■□□□ 1.54
COL16A1-201ENST00000373667 GOLGA2Q08379 1002 aa24.65■■□□□ 1.54
COL16A1-201ENST00000373667 ZNF521Q96K83 1311 aa24.64■■□□□ 1.54
COL16A1-201ENST00000373667 ELL2O00472 640 aaPredicted RBP24.64■■□□□ 1.54
COL16A1-201ENST00000373667 RPS6KA4O75676 772 aa24.64■■□□□ 1.54
COL16A1-201ENST00000373667 EIF2S2P20042 333 aaKnown RBP24.64■■□□□ 1.54
COL16A1-201ENST00000373667 SPINK5Q9NQ38 1064 aaPredicted RBP24.64■■□□□ 1.54
COL16A1-201ENST00000373667 FLAD1Q8NFF5 587 aa24.63■■□□□ 1.53
COL16A1-201ENST00000373667 MYH16Q9H6N6 1097 aa24.63■■□□□ 1.53
COL16A1-201ENST00000373667 ZBTB1Q9Y2K1 713 aa24.63■■□□□ 1.53
COL16A1-201ENST00000373667 PNPLA7Q6ZV29 1317 aa24.62■■□□□ 1.53
COL16A1-201ENST00000373667 MYH14Q7Z406 1995 aaKnown RBP24.62■■□□□ 1.53
COL16A1-201ENST00000373667 CICQ96RK0 1608 aaPredicted RBP24.62■■□□□ 1.53
COL16A1-201ENST00000373667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.62■■□□□ 1.53
COL16A1-201ENST00000373667 TRAPPC3LQ5T215 181 aa24.62■■□□□ 1.53
COL16A1-201ENST00000373667 DUSP27Q5VZP5 1158 aa24.62■■□□□ 1.53
COL16A1-201ENST00000373667 AMIGO3Q86WK7 504 aa24.62■■□□□ 1.53
COL16A1-201ENST00000373667 COL23A1Q86Y22 540 aaPredicted RBP24.62■■□□□ 1.53
COL16A1-201ENST00000373667 NECTIN2Q92692 538 aa24.62■■□□□ 1.53
COL16A1-201ENST00000373667 PDGFDQ9GZP0 370 aaPredicted RBP24.62■■□□□ 1.53
COL16A1-201ENST00000373667 ZNF330Q9Y3S2 320 aaPredicted RBP24.62■■□□□ 1.53
COL16A1-201ENST00000373667 SSFA2P28290 1259 aa24.61■■□□□ 1.53
COL16A1-201ENST00000373667 PIP4K2AP48426 406 aaPredicted RBP24.61■■□□□ 1.53
COL16A1-201ENST00000373667 C8orf58Q8NAV2 365 aa24.61■■□□□ 1.53
COL16A1-201ENST00000373667 NPM2Q86SE8 214 aaKnown RBP24.6■■□□□ 1.53
COL16A1-201ENST00000373667 FANCIQ9NVI1 1328 aa24.6■■□□□ 1.53
COL16A1-201ENST00000373667 TUBGCP6Q96RT7 1819 aa24.59■■□□□ 1.53
COL16A1-201ENST00000373667 ARXQ96QS3 562 aa24.59■■□□□ 1.53
COL16A1-201ENST00000373667 UBR3Q6ZT12 1888 aa24.58■■□□□ 1.53
COL16A1-201ENST00000373667 E9PSI1 815 aa24.58■■□□□ 1.53
COL16A1-201ENST00000373667 ARHGEF1Q92888 912 aaKnown RBP24.58■■□□□ 1.53
COL16A1-201ENST00000373667 CDCA7LQ96GN5 454 aa24.58■■□□□ 1.53
COL16A1-201ENST00000373667 RFC4P35249 363 aa24.57■■□□□ 1.52
COL16A1-201ENST00000373667 EXOSC9Q06265 439 aaKnown RBP24.57■■□□□ 1.52
COL16A1-201ENST00000373667 SOS1Q07889 1333 aaPredicted RBP24.57■■□□□ 1.52
COL16A1-201ENST00000373667 ZBTB7AO95365 584 aa24.56■■□□□ 1.52
COL16A1-201ENST00000373667 HOXB7P09629 217 aa24.56■■□□□ 1.52
COL16A1-201ENST00000373667 MYL6BP14649 208 aa24.56■■□□□ 1.52
COL16A1-201ENST00000373667 ADRA2BP18089 450 aa24.56■■□□□ 1.52
COL16A1-201ENST00000373667 SLFN5Q08AF3 891 aa24.56■■□□□ 1.52
COL16A1-201ENST00000373667 HDGFL1Q5TGJ6 251 aa24.56■■□□□ 1.52
COL16A1-201ENST00000373667 TSPYL6Q8N831 410 aa24.56■■□□□ 1.52
COL16A1-201ENST00000373667 NBPF26B4DH59 902 aa24.55■■□□□ 1.52
COL16A1-201ENST00000373667 IL6STP40189 918 aaPredicted RBP24.55■■□□□ 1.52
COL16A1-201ENST00000373667 NBPF10Q6P3W6 841 aaKnown RBP24.55■■□□□ 1.52
COL16A1-201ENST00000373667 NBPF15Q8N660 670 aa24.55■■□□□ 1.52
COL16A1-201ENST00000373667 QSER1Q2KHR3 1735 aa24.55■■□□□ 1.52
COL16A1-201ENST00000373667 EIF5P55010 431 aaKnown RBP24.54■■□□□ 1.52
COL16A1-201ENST00000373667 TWISTNBQ3B726 338 aaPredicted RBP24.54■■□□□ 1.52
COL16A1-201ENST00000373667 ATF5Q9Y2D1 282 aaPredicted RBP24.54■■□□□ 1.52
COL16A1-201ENST00000373667 LAMB4A4D0S4 1761 aa24.54■■□□□ 1.52
COL16A1-201ENST00000373667 A0A087WZG4 1122 aa24.53■■□□□ 1.52
COL16A1-201ENST00000373667 SLC16A10Q8TF71 515 aa24.53■■□□□ 1.52
COL16A1-201ENST00000373667 COL15A1P39059 1388 aa24.53■■□□□ 1.52
COL16A1-201ENST00000373667 ZPR1O75312 459 aa24.52■■□□□ 1.52
COL16A1-201ENST00000373667 ANXA1P04083 346 aa24.51■■□□□ 1.51
COL16A1-201ENST00000373667 SRP68Q9UHB9 627 aaKnown RBP24.51■■□□□ 1.51
COL16A1-201ENST00000373667 TBC1D2BQ9UPU7 963 aa24.51■■□□□ 1.51
COL16A1-201ENST00000373667 MSL1Q68DK7 614 aa24.5■■□□□ 1.51
COL16A1-201ENST00000373667 CHMP4AQ9BY43 222 aa24.5■■□□□ 1.51
COL16A1-201ENST00000373667 ERBB4Q15303 1308 aa24.5■■□□□ 1.51
COL16A1-201ENST00000373667 CASZ1Q86V15 1759 aa24.49■■□□□ 1.51
COL16A1-201ENST00000373667 TCERG1O14776 1098 aaKnown RBP24.49■■□□□ 1.51
COL16A1-201ENST00000373667 PDIA6Q15084 440 aa24.49■■□□□ 1.51
COL16A1-201ENST00000373667 CCDC30Q5VVM6 783 aa24.49■■□□□ 1.51
COL16A1-201ENST00000373667 DZIP3Q86Y13 1208 aaKnown RBP24.49■■□□□ 1.51
COL16A1-201ENST00000373667 YTHDC1Q96MU7 727 aaKnown RBP24.49■■□□□ 1.51
COL16A1-201ENST00000373667 MTFR1LQ9H019 292 aa24.49■■□□□ 1.51
COL16A1-201ENST00000373667 CHPF2Q9P2E5 772 aa24.49■■□□□ 1.51
COL16A1-201ENST00000373667 ZBED9Q6R2W3 1325 aa24.49■■□□□ 1.51
COL16A1-201ENST00000373667 PROSER3Q2NL68 480 aa24.48■■□□□ 1.51
COL16A1-201ENST00000373667 USPL1Q5W0Q7 1092 aa24.48■■□□□ 1.51
COL16A1-201ENST00000373667 SPON1Q9HCB6 807 aa24.48■■□□□ 1.51
COL16A1-201ENST00000373667 DDX21Q9NR30 783 aaKnown RBP eCLIP24.48■■□□□ 1.51
COL16A1-201ENST00000373667 DBF4Q9UBU7 674 aaPredicted RBP24.48■■□□□ 1.51
COL16A1-201ENST00000373667 NARFQ9UHQ1 456 aa24.48■■□□□ 1.51
COL16A1-201ENST00000373667 VAMP4O75379 141 aa24.47■■□□□ 1.51
COL16A1-201ENST00000373667 TRMT2AQ8IZ69 625 aaKnown RBP24.47■■□□□ 1.51
COL16A1-201ENST00000373667 USP42Q9H9J4 1324 aaKnown RBP24.46■■□□□ 1.51
COL16A1-201ENST00000373667 AIMP1Q12904 312 aaKnown RBP24.46■■□□□ 1.51
COL16A1-201ENST00000373667 GYS1P13807 737 aa24.45■■□□□ 1.5
COL16A1-201ENST00000373667 STK31Q9BXU1 1019 aa24.45■■□□□ 1.5
COL16A1-201ENST00000373667 KIF6Q6ZMV9 814 aa24.44■■□□□ 1.5
COL16A1-201ENST00000373667 NLGN1Q8N2Q7 840 aa24.44■■□□□ 1.5
COL16A1-201ENST00000373667 HYPKQ9NX55 129 aa24.44■■□□□ 1.5
COL16A1-201ENST00000373667 C4AP0C0L4 1744 aa24.44■■□□□ 1.5
COL16A1-201ENST00000373667 TTLL7Q6ZT98 887 aa24.43■■□□□ 1.5
COL16A1-201ENST00000373667 COPS6Q7L5N1 327 aa24.43■■□□□ 1.5
COL16A1-201ENST00000373667 XAGE3Q8WTP9 111 aa24.43■■□□□ 1.5
COL16A1-201ENST00000373667 CAMTA2O94983 1202 aa24.42■■□□□ 1.5
COL16A1-201ENST00000373667 POLD1P28340 1107 aa24.42■■□□□ 1.5
COL16A1-201ENST00000373667 FKBP8Q14318 412 aa24.42■■□□□ 1.5
COL16A1-201ENST00000373667 LRP10Q7Z4F1 713 aa24.41■■□□□ 1.5
COL16A1-201ENST00000373667 SLC4A2P04920 1241 aa24.4■■□□□ 1.5
COL16A1-201ENST00000373667 ZBTB3Q9H5J0 574 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms