RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 KCNB2Q92953 911 aa9.11□□□□□ -0.95
GARNL3-202ENST00000373387 RAD50Q92878 1312 aa9.11□□□□□ -0.95
GARNL3-202ENST00000373387 FER1L4A9Z1Z3 1794 aa9.1□□□□□ -0.95
GARNL3-202ENST00000373387 ANP32BQ92688 251 aaKnown RBP9.1□□□□□ -0.95
GARNL3-202ENST00000373387 APBB1O00213 710 aa9.1□□□□□ -0.95
GARNL3-202ENST00000373387 CCDC30Q5VVM6 783 aa9.1□□□□□ -0.95
GARNL3-202ENST00000373387 LSG1Q9H089 658 aaKnown RBP9.1□□□□□ -0.95
GARNL3-202ENST00000373387 PDCL3Q9H2J4 239 aa9.1□□□□□ -0.95
GARNL3-202ENST00000373387 C5P01031 1676 aa9.1□□□□□ -0.95
GARNL3-202ENST00000373387 FUCA2Q9BTY2 467 aa9.09□□□□□ -0.95
GARNL3-202ENST00000373387 LRRFIP2Q9Y608 721 aaKnown RBP9.09□□□□□ -0.95
GARNL3-202ENST00000373387 SGSM2O43147 1006 aa9.09□□□□□ -0.95
GARNL3-202ENST00000373387 GADD45BO75293 160 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-202ENST00000373387 HOXC9P31274 260 aa9.09□□□□□ -0.95
GARNL3-202ENST00000373387 OVOS2A0A0G2JMS6 1433 aa9.08□□□□□ -0.96
GARNL3-202ENST00000373387 GNAT3A8MTJ3 354 aa9.08□□□□□ -0.96
GARNL3-202ENST00000373387 SLC4A10Q6U841 1118 aa9.08□□□□□ -0.96
GARNL3-202ENST00000373387 HEG1Q9ULI3 1381 aa9.08□□□□□ -0.96
GARNL3-202ENST00000373387 MSNP26038 577 aaKnown RBP9.08□□□□□ -0.96
GARNL3-202ENST00000373387 SNX14Q9Y5W7 946 aa9.08□□□□□ -0.96
GARNL3-202ENST00000373387 LAMA4Q16363 1823 aa9.08□□□□□ -0.96
GARNL3-202ENST00000373387 RAB11FIP3O75154 756 aa9.08□□□□□ -0.96
GARNL3-202ENST00000373387 CCDC39Q9UFE4 941 aa9.08□□□□□ -0.96
GARNL3-202ENST00000373387 JCADQ9P266 1359 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 TRPM3Q9HCF6 1732 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-202ENST00000373387 MTX1Q13505 466 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 ADCY9O60503 1353 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 USP48Q86UV5 1035 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 RTF1Q92541 710 aaKnown RBP9.07□□□□□ -0.96
GARNL3-202ENST00000373387 SNRKQ9NRH2 765 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 SCN11AQ9UI33 1791 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 MCCP23508 829 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 XPCQ01831 940 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-202ENST00000373387 ST3GAL1Q11201 340 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 UVSSAQ2YD98 709 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 GLIPR1L2Q4G1C9 344 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 STK31Q9BXU1 1019 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 TSPY26PQ9H489 355 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 SLIT3O75094 1523 aa9.07□□□□□ -0.96
GARNL3-202ENST00000373387 WDR33Q9C0J8 1336 aaKnown RBP9.06□□□□□ -0.96
GARNL3-202ENST00000373387 DDX60Q8IY21 1712 aaKnown RBP9.06□□□□□ -0.96
GARNL3-202ENST00000373387 HOXB7P09629 217 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 NCLP19338 710 aaKnown RBP9.06□□□□□ -0.96
GARNL3-202ENST00000373387 RUFY3Q7L099 469 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 RASEFQ8IZ41 740 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 ANO2Q9NQ90 1003 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 TBX22Q9Y458 520 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 ADGRL3Q9HAR2 1447 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-202ENST00000373387 BEND3Q5T5X7 828 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 TAF7Q15545 349 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-202ENST00000373387 RHPN1Q8TCX5 695 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
GARNL3-202ENST00000373387 GLI3P10071 1580 aa9.06□□□□□ -0.96
GARNL3-202ENST00000373387 UPF3BQ9BZI7 483 aaKnown RBP9.05□□□□□ -0.96
GARNL3-202ENST00000373387 ZNF142P52746 1687 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-202ENST00000373387 RGPD5Q99666 1765 aa9.05□□□□□ -0.96
GARNL3-202ENST00000373387 MLECQ14165 292 aa9.05□□□□□ -0.96
GARNL3-202ENST00000373387 CSPP1Q1MSJ5 1256 aa9.05□□□□□ -0.96
GARNL3-202ENST00000373387 PPP1R42Q7Z4L9 355 aa9.05□□□□□ -0.96
GARNL3-202ENST00000373387 FAM184AQ8NB25 1140 aa9.05□□□□□ -0.96
GARNL3-202ENST00000373387 HYPKQ9NX55 129 aa9.05□□□□□ -0.96
GARNL3-202ENST00000373387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
GARNL3-202ENST00000373387 TTC41PQ6P2S7 1318 aa9.05□□□□□ -0.96
GARNL3-202ENST00000373387 ZSCAN22P10073 491 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-202ENST00000373387 GTF2F1P35269 517 aaKnown RBP eCLIP9.04□□□□□ -0.96
GARNL3-202ENST00000373387 EIF4A1P60842 406 aaKnown RBP9.04□□□□□ -0.96
GARNL3-202ENST00000373387 RILPL2Q969X0 211 aa9.04□□□□□ -0.96
GARNL3-202ENST00000373387 SPTLC3Q9NUV7 552 aa9.04□□□□□ -0.96
GARNL3-202ENST00000373387 PXDNQ92626 1479 aa9.04□□□□□ -0.96
GARNL3-202ENST00000373387 LARGE1O95461 756 aa9.04□□□□□ -0.96
GARNL3-202ENST00000373387 AK2P54819 239 aa9.04□□□□□ -0.96
GARNL3-202ENST00000373387 AMOTL2Q9Y2J4 779 aa9.04□□□□□ -0.96
GARNL3-202ENST00000373387 NPHP4O75161 1426 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-202ENST00000373387 DYNC1I1O14576 645 aa9.04□□□□□ -0.96
GARNL3-202ENST00000373387 NBPF7P0C2Y1 421 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-202ENST00000373387 UBTFL1P0CB47 393 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-202ENST00000373387 NUTM1Q86Y26 1132 aa9.04□□□□□ -0.96
GARNL3-202ENST00000373387 CCDC183Q5T5S1 534 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 KIF1BPQ96EK5 621 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 TM6SF1Q9BZW5 370 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 IL1RAPL2Q9NP60 686 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 UTYO14607 1347 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 TRIM6-TRIM34B2RNG4 842 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 SYT1P21579 422 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-202ENST00000373387 SASS6Q6UVJ0 657 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-202ENST00000373387 SYAP1Q96A49 352 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-202ENST00000373387 GDPD2Q9HCC8 539 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 R3HCC1Q9Y3T6 440 aaKnown RBP9.03□□□□□ -0.96
GARNL3-202ENST00000373387 F13A1P00488 732 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 PIBF1Q8WXW3 757 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 CNPY2Q9Y2B0 182 aa9.03□□□□□ -0.96
GARNL3-202ENST00000373387 AFDNP55196 1824 aaKnown RBP9.03□□□□□ -0.96
GARNL3-202ENST00000373387 ARFGEF2Q9Y6D5 1785 aa9.02□□□□□ -0.96
GARNL3-202ENST00000373387 AP5Z1O43299 807 aa9.02□□□□□ -0.96
GARNL3-202ENST00000373387 PHF14O94880 888 aa9.02□□□□□ -0.96
GARNL3-202ENST00000373387 UBE2HP62256 183 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms