RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 CFAP45Q9UL16 551 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 CBFA2T2O43439 604 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 CAVIN2O95810 425 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 NEK4P51957 841 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 KRT85P78386 507 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 PTCH1Q13635 1447 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 RLBP1P12271 317 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 HDGFL1Q5TGJ6 251 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 TTC21AQ8NDW8 1320 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 KINO60870 393 aaKnown RBP12.6□□□□□ -0.39
PGK1-201ENST00000373316 FRAT2O75474 233 aaPredicted RBP12.6□□□□□ -0.39
PGK1-201ENST00000373316 PDCL2Q8N4E4 241 aa12.6□□□□□ -0.39
PGK1-201ENST00000373316 EYA1Q99502 592 aa12.6□□□□□ -0.39
PGK1-201ENST00000373316 GRPEL1Q9HAV7 217 aa12.6□□□□□ -0.39
PGK1-201ENST00000373316 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
PGK1-201ENST00000373316 KNDC1Q76NI1 1749 aa12.6□□□□□ -0.39
PGK1-201ENST00000373316 MARCH6O60337 910 aa12.6□□□□□ -0.39
PGK1-201ENST00000373316 KIF1BPQ96EK5 621 aa12.6□□□□□ -0.39
PGK1-201ENST00000373316 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
PGK1-201ENST00000373316 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
PGK1-201ENST00000373316 CCDC158Q5M9N0 1113 aa12.59□□□□□ -0.39
PGK1-201ENST00000373316 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
PGK1-201ENST00000373316 KRT28Q7Z3Y7 464 aa12.59□□□□□ -0.39
PGK1-201ENST00000373316 WASF1Q92558 559 aa12.59□□□□□ -0.39
PGK1-201ENST00000373316 LRRC7Q96NW7 1537 aa12.59□□□□□ -0.39
PGK1-201ENST00000373316 ZNF330Q9Y3S2 320 aaPredicted RBP12.59□□□□□ -0.39
PGK1-201ENST00000373316 GLRX3O76003 335 aaKnown RBP12.59□□□□□ -0.39
PGK1-201ENST00000373316 SMARCE1Q969G3 411 aa12.59□□□□□ -0.39
PGK1-201ENST00000373316 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
PGK1-201ENST00000373316 ITSN1Q15811 1721 aa12.58□□□□□ -0.39
PGK1-201ENST00000373316 NFXL1Q6ZNB6 911 aa12.58□□□□□ -0.4
PGK1-201ENST00000373316 XRN1Q8IZH2 1706 aaKnown RBP12.58□□□□□ -0.4
PGK1-201ENST00000373316 RNF123Q5XPI4 1314 aa12.58□□□□□ -0.4
PGK1-201ENST00000373316 G3V3G9 751 aa12.58□□□□□ -0.4
PGK1-201ENST00000373316 TNNT3P45378 269 aaPredicted RBP12.58□□□□□ -0.4
PGK1-201ENST00000373316 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
PGK1-201ENST00000373316 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
PGK1-201ENST00000373316 GNL3LQ9NVN8 582 aaKnown RBP12.57□□□□□ -0.4
PGK1-201ENST00000373316 PNPLA6Q8IY17 1366 aa12.57□□□□□ -0.4
PGK1-201ENST00000373316 HOXC9P31274 260 aa12.57□□□□□ -0.4
PGK1-201ENST00000373316 TRMT2AQ8IZ69 625 aaKnown RBP12.57□□□□□ -0.4
PGK1-201ENST00000373316 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
PGK1-201ENST00000373316 OVOS2A0A0J9YW53 1432 aa12.57□□□□□ -0.4
PGK1-201ENST00000373316 OVOS2Q6IE36 1432 aa12.57□□□□□ -0.4
PGK1-201ENST00000373316 UVSSAQ2YD98 709 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 AK7Q96M32 723 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 IQSEC2Q5JU85 1478 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 CTAGE5O15320 804 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
PGK1-201ENST00000373316 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 SNX21Q969T3 373 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 CHD2O14647 1828 aaKnown RBP12.56□□□□□ -0.4
PGK1-201ENST00000373316 TXLNAP40222 546 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 PEAK1Q9H792 1746 aa12.56□□□□□ -0.4
PGK1-201ENST00000373316 NEMFO60524 1076 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 TMEM57Q8N5G2 664 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 SSH1Q8WYL5 1049 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 ANAPC15P60006 121 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 MYO6Q9UM54 1294 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 MON2Q7Z3U7 1717 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 SMTNL1A8MU46 457 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 HOMER1Q86YM7 354 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
PGK1-201ENST00000373316 ADGRL3Q9HAR2 1447 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 GCP02774 474 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
PGK1-201ENST00000373316 SSH2Q76I76 1423 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 SCAND2PQ9GZW5 306 aaPredicted RBP12.54□□□□□ -0.4
PGK1-201ENST00000373316 APPP05067 770 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 FOXD4L5Q5VV16 416 aaPredicted RBP12.54□□□□□ -0.4
PGK1-201ENST00000373316 BLOC1S2Q6QNY1 142 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 FOXD4L4Q8WXT5 416 aaPredicted RBP12.54□□□□□ -0.4
PGK1-201ENST00000373316 SDF4Q9BRK5 362 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 CCDC66A2RUB6 948 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 VPS37DQ86XT2 251 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 AKAP2Q9Y2D5 859 aa12.54□□□□□ -0.4
PGK1-201ENST00000373316 PIK3C2AO00443 1686 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 PRPF40AO75400 957 aaKnown RBP12.53□□□□□ -0.4
PGK1-201ENST00000373316 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
PGK1-201ENST00000373316 STRCP1A6NGW2 1772 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
PGK1-201ENST00000373316 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
PGK1-201ENST00000373316 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
PGK1-201ENST00000373316 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 MX1P20591 662 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 ZSCAN30Q86W11 494 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
PGK1-201ENST00000373316 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms