RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 GTPBP4Q9BZE4 634 aaKnown RBP19.03■□□□□ 0.64
PABPC4-202ENST00000372857 CPSF1Q10570 1443 aaKnown RBP19.03■□□□□ 0.64
PABPC4-202ENST00000372857 CHL1O00533 1208 aa19.02■□□□□ 0.64
PABPC4-202ENST00000372857 MAP4K4O95819 1239 aaPredicted RBP19.02■□□□□ 0.64
PABPC4-202ENST00000372857 CHAF1AQ13111 956 aaPredicted RBP19.02■□□□□ 0.64
PABPC4-202ENST00000372857 SALL3Q9BXA9 1300 aa19.02■□□□□ 0.63
PABPC4-202ENST00000372857 UBE2HP62256 183 aa19.02■□□□□ 0.63
PABPC4-202ENST00000372857 PNMA6EA0A0J9YXQ4 647 aa19.01■□□□□ 0.63
PABPC4-202ENST00000372857 ZSCAN22P10073 491 aaPredicted RBP19.01■□□□□ 0.63
PABPC4-202ENST00000372857 LTV1Q96GA3 475 aaPredicted RBP19.01■□□□□ 0.63
PABPC4-202ENST00000372857 TMEM87AQ8NBN3 555 aa19.01■□□□□ 0.63
PABPC4-202ENST00000372857 BBXQ8WY36 941 aaPredicted RBP19■□□□□ 0.63
PABPC4-202ENST00000372857 CDK12Q9NYV4 1490 aaPredicted RBP19■□□□□ 0.63
PABPC4-202ENST00000372857 GNAI2P04899 355 aa19■□□□□ 0.63
PABPC4-202ENST00000372857 SYT1P21579 422 aa19■□□□□ 0.63
PABPC4-202ENST00000372857 HAP1P54257 671 aaPredicted RBP19■□□□□ 0.63
PABPC4-202ENST00000372857 DIAPH3Q9NSV4 1193 aa19■□□□□ 0.63
PABPC4-202ENST00000372857 LETM1O95202 739 aaPredicted RBP19■□□□□ 0.63
PABPC4-202ENST00000372857 C14orf37Q86TY3 774 aa19■□□□□ 0.63
PABPC4-202ENST00000372857 STX6O43752 255 aa18.99■□□□□ 0.63
PABPC4-202ENST00000372857 IL1RAPL2Q9NP60 686 aa18.99■□□□□ 0.63
PABPC4-202ENST00000372857 KIAA0232Q92628 1395 aa18.99■□□□□ 0.63
PABPC4-202ENST00000372857 DIP2BQ9P265 1576 aa18.99■□□□□ 0.63
PABPC4-202ENST00000372857 FUCA2Q9BTY2 467 aa18.98■□□□□ 0.63
PABPC4-202ENST00000372857 CHMP3Q9Y3E7 222 aa18.98■□□□□ 0.63
PABPC4-202ENST00000372857 CPA1P15085 419 aa18.98■□□□□ 0.63
PABPC4-202ENST00000372857 EDC4Q6P2E9 1401 aaKnown RBP18.98■□□□□ 0.63
PABPC4-202ENST00000372857 TTC21BQ7Z4L5 1316 aa18.97■□□□□ 0.63
PABPC4-202ENST00000372857 F13A1P00488 732 aa18.97■□□□□ 0.63
PABPC4-202ENST00000372857 HSPA4P34932 840 aa18.97■□□□□ 0.63
PABPC4-202ENST00000372857 AK2P54819 239 aa18.97■□□□□ 0.63
PABPC4-202ENST00000372857 DNM1Q05193 864 aaKnown RBP18.97■□□□□ 0.63
PABPC4-202ENST00000372857 NUTM1Q86Y26 1132 aa18.97■□□□□ 0.63
PABPC4-202ENST00000372857 PTGS1P23219 599 aa18.96■□□□□ 0.63
PABPC4-202ENST00000372857 CCT4P50991 539 aaKnown RBP18.96■□□□□ 0.63
PABPC4-202ENST00000372857 NGDNQ8NEJ9 315 aaKnown RBP18.96■□□□□ 0.63
PABPC4-202ENST00000372857 ANKRD7Q92527 254 aa18.96■□□□□ 0.63
PABPC4-202ENST00000372857 SMC3Q9UQE7 1217 aa18.96■□□□□ 0.63
PABPC4-202ENST00000372857 TNRQ92752 1358 aa18.96■□□□□ 0.63
PABPC4-202ENST00000372857 KIF20AO95235 890 aa18.96■□□□□ 0.63
PABPC4-202ENST00000372857 SSH2Q76I76 1423 aa18.95■□□□□ 0.62
PABPC4-202ENST00000372857 RUFY3Q7L099 469 aa18.95■□□□□ 0.62
PABPC4-202ENST00000372857 ATP7BP35670 1465 aa18.95■□□□□ 0.62
PABPC4-202ENST00000372857 LARGE1O95461 756 aa18.95■□□□□ 0.62
PABPC4-202ENST00000372857 RASEFQ8IZ41 740 aa18.95■□□□□ 0.62
PABPC4-202ENST00000372857 SNX14Q9Y5W7 946 aa18.95■□□□□ 0.62
PABPC4-202ENST00000372857 TUBGCP6Q96RT7 1819 aa18.94■□□□□ 0.62
PABPC4-202ENST00000372857 AMOTL2Q9Y2J4 779 aa18.94■□□□□ 0.62
PABPC4-202ENST00000372857 C16orf45Q96MC5 204 aaPredicted RBP18.93■□□□□ 0.62
PABPC4-202ENST00000372857 CCDC83Q8IWF9 413 aa18.93■□□□□ 0.62
PABPC4-202ENST00000372857 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
PABPC4-202ENST00000372857 LRRFIP2Q9Y608 721 aaKnown RBP18.93■□□□□ 0.62
PABPC4-202ENST00000372857 GOLGA6L6A8MZA4 724 aa18.92■□□□□ 0.62
PABPC4-202ENST00000372857 LRMPQ12912 555 aa18.92■□□□□ 0.62
PABPC4-202ENST00000372857 CAMK4Q16566 473 aa18.92■□□□□ 0.62
PABPC4-202ENST00000372857 LIMCH1Q9UPQ0 1083 aa18.92■□□□□ 0.62
PABPC4-202ENST00000372857 VPS37CA5D8V6 355 aaPredicted RBP18.92■□□□□ 0.62
PABPC4-202ENST00000372857 CTIFO43310 598 aaKnown RBP18.92■□□□□ 0.62
PABPC4-202ENST00000372857 HDGFP51858 240 aaKnown RBP18.92■□□□□ 0.62
PABPC4-202ENST00000372857 NAA30Q147X3 362 aaPredicted RBP18.92■□□□□ 0.62
PABPC4-202ENST00000372857 TTC14Q96N46 770 aa18.92■□□□□ 0.62
PABPC4-202ENST00000372857 NAP1L2Q9ULW6 460 aaPredicted RBP18.92■□□□□ 0.62
PABPC4-202ENST00000372857 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.92■□□□□ 0.62
PABPC4-202ENST00000372857 NCBP1Q09161 790 aaKnown RBP18.92■□□□□ 0.62
PABPC4-202ENST00000372857 AATKQ6ZMQ8 1374 aa18.92■□□□□ 0.62
PABPC4-202ENST00000372857 PAXIP1Q6ZW49 1069 aaPredicted RBP18.92■□□□□ 0.62
PABPC4-202ENST00000372857 STAP2Q9UGK3 403 aa18.92■□□□□ 0.62
PABPC4-202ENST00000372857 TMEM2Q9UHN6 1383 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 GJB2P29033 226 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 ATP8B2P98198 1209 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 LUZP1Q86V48 1076 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 ATP6V1DQ9Y5K8 247 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 CCDC192P0DO97 292 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 AMPHP49418 695 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 IL17RAQ96F46 866 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
PABPC4-202ENST00000372857 DDX54Q8TDD1 881 aaKnown RBP18.9■□□□□ 0.62
PABPC4-202ENST00000372857 RAD50Q92878 1312 aa18.9■□□□□ 0.62
PABPC4-202ENST00000372857 TPM3P06753 285 aa18.9■□□□□ 0.62
PABPC4-202ENST00000372857 CASTP20810 708 aaKnown RBP18.9■□□□□ 0.62
PABPC4-202ENST00000372857 ZNF771Q7L3S4 317 aaPredicted RBP18.9■□□□□ 0.62
PABPC4-202ENST00000372857 CCDC186Q7Z3E2 898 aa18.9■□□□□ 0.62
PABPC4-202ENST00000372857 DRC7Q8IY82 874 aa18.9■□□□□ 0.62
PABPC4-202ENST00000372857 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
PABPC4-202ENST00000372857 MAP3K19Q56UN5 1328 aa18.9■□□□□ 0.62
PABPC4-202ENST00000372857 MTHFSDQ2M296 383 aaKnown RBP18.9■□□□□ 0.62
PABPC4-202ENST00000372857 NRBP1Q9UHY1 535 aa18.9■□□□□ 0.62
PABPC4-202ENST00000372857 MTMR6Q9Y217 621 aa18.89■□□□□ 0.61
PABPC4-202ENST00000372857 GNAI3P08754 354 aa18.89■□□□□ 0.61
PABPC4-202ENST00000372857 CWC27Q6UX04 472 aaKnown RBP18.89■□□□□ 0.61
PABPC4-202ENST00000372857 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.61
PABPC4-202ENST00000372857 SGSM2O43147 1006 aa18.88■□□□□ 0.61
PABPC4-202ENST00000372857 CKAP2LQ8IYA6 745 aa18.88■□□□□ 0.61
PABPC4-202ENST00000372857 STK31Q9BXU1 1019 aa18.88■□□□□ 0.61
PABPC4-202ENST00000372857 NLRP6P59044 892 aa18.88■□□□□ 0.61
PABPC4-202ENST00000372857 FAM173BQ6P4H8 233 aa18.88■□□□□ 0.61
PABPC4-202ENST00000372857 FERMT3Q86UX7 667 aa18.87■□□□□ 0.61
PABPC4-202ENST00000372857 CRB1P82279 1406 aa18.87■□□□□ 0.61
PABPC4-202ENST00000372857 FLIIQ13045 1269 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms