RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 CCAR1Q8IX12 1150 aaKnown RBP12.33□□□□□ -0.44
NUP188-201ENST00000372577 ERCC4Q92889 916 aaPredicted RBP12.33□□□□□ -0.44
NUP188-201ENST00000372577 BOLA2Q9H3K6 86 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
NUP188-201ENST00000372577 A0A087WZG4 1122 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 OFD1O75665 1012 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 SLC5A1P13866 664 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 CDR1P51861 262 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 MAP3K12Q12852 859 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 EIF4A2Q14240 407 aaKnown RBP12.32□□□□□ -0.44
NUP188-201ENST00000372577 TTF1Q15361 905 aaPredicted RBP12.32□□□□□ -0.44
NUP188-201ENST00000372577 PTCD1O75127 700 aaKnown RBP12.32□□□□□ -0.44
NUP188-201ENST00000372577 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
NUP188-201ENST00000372577 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 NPHP3Q7Z494 1330 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 MSH6P52701 1360 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
NUP188-201ENST00000372577 SERPINC1P01008 464 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 NUP133Q8WUM0 1156 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 AK7Q96M32 723 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 BABAM1Q9NWV8 329 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 ZMYM4Q5VZL5 1548 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
NUP188-201ENST00000372577 PPP1R42Q7Z4L9 355 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
NUP188-201ENST00000372577 ANAPC15P60006 121 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 CCDC183Q5T5S1 534 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 PI4KAP2A4QPH2 592 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 CCDC83Q8IWF9 413 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 PI4KAP1Q8N8J0 262 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
NUP188-201ENST00000372577 TBX22Q9Y458 520 aa12.31□□□□□ -0.44
NUP188-201ENST00000372577 CTAGE5O15320 804 aa12.3□□□□□ -0.44
NUP188-201ENST00000372577 LUC7LQ9NQ29 371 aaKnown RBP12.3□□□□□ -0.44
NUP188-201ENST00000372577 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
NUP188-201ENST00000372577 EXOC5O00471 708 aa12.3□□□□□ -0.44
NUP188-201ENST00000372577 NAP1L1P55209 391 aaKnown RBP12.3□□□□□ -0.44
NUP188-201ENST00000372577 RUFY1Q96T51 708 aa12.3□□□□□ -0.44
NUP188-201ENST00000372577 PHAXQ9H814 394 aaKnown RBP12.3□□□□□ -0.44
NUP188-201ENST00000372577 PPFIBP1Q86W92 1011 aa12.3□□□□□ -0.44
NUP188-201ENST00000372577 MYO5CQ9NQX4 1742 aa12.3□□□□□ -0.44
NUP188-201ENST00000372577 UPF3BQ9BZI7 483 aaKnown RBP12.3□□□□□ -0.44
NUP188-201ENST00000372577 MTMR7Q9Y216 660 aa12.3□□□□□ -0.44
NUP188-201ENST00000372577 MAGI3Q5TCQ9 1506 aa12.3□□□□□ -0.44
NUP188-201ENST00000372577 ATP8B2P98198 1209 aa12.29□□□□□ -0.44
NUP188-201ENST00000372577 HSP90B2PQ58FF3 399 aa12.29□□□□□ -0.44
NUP188-201ENST00000372577 CCDC8Q9H0W5 538 aaPredicted RBP12.29□□□□□ -0.44
NUP188-201ENST00000372577 NAPBQ9H115 298 aa12.29□□□□□ -0.44
NUP188-201ENST00000372577 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
NUP188-201ENST00000372577 PCDHB15Q9Y5E8 787 aa12.29□□□□□ -0.44
NUP188-201ENST00000372577 ABCA8O94911 1581 aa12.29□□□□□ -0.44
NUP188-201ENST00000372577 RHPN1Q8TCX5 695 aa12.29□□□□□ -0.44
NUP188-201ENST00000372577 BRPF3Q9ULD4 1205 aa12.29□□□□□ -0.44
NUP188-201ENST00000372577 ZPR1O75312 459 aa12.29□□□□□ -0.44
NUP188-201ENST00000372577 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
NUP188-201ENST00000372577 MYO6Q9UM54 1294 aa12.28□□□□□ -0.44
NUP188-201ENST00000372577 ZNF213O14771 459 aa12.28□□□□□ -0.44
NUP188-201ENST00000372577 KRT18P05783 430 aaKnown RBP12.28□□□□□ -0.44
NUP188-201ENST00000372577 SETQ01105 290 aaPredicted RBP12.28□□□□□ -0.44
NUP188-201ENST00000372577 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
NUP188-201ENST00000372577 KDM4AO75164 1064 aa12.28□□□□□ -0.44
NUP188-201ENST00000372577 SNX21Q969T3 373 aa12.28□□□□□ -0.44
NUP188-201ENST00000372577 VAMP4O75379 141 aa12.28□□□□□ -0.44
NUP188-201ENST00000372577 TNPO1Q92973 898 aaKnown RBP12.28□□□□□ -0.44
NUP188-201ENST00000372577 KSR2Q6VAB6 950 aa12.27□□□□□ -0.44
NUP188-201ENST00000372577 ZNF771Q7L3S4 317 aaPredicted RBP12.27□□□□□ -0.44
NUP188-201ENST00000372577 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.44
NUP188-201ENST00000372577 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.45
NUP188-201ENST00000372577 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
NUP188-201ENST00000372577 ZFYP08048 801 aaPredicted RBP12.27□□□□□ -0.45
NUP188-201ENST00000372577 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
NUP188-201ENST00000372577 ANO10Q9NW15 660 aa12.27□□□□□ -0.45
NUP188-201ENST00000372577 CT47A1Q5JQC4 288 aaPredicted RBP12.27□□□□□ -0.45
NUP188-201ENST00000372577 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
NUP188-201ENST00000372577 DDX19AQ9NUU7 478 aaKnown RBP12.27□□□□□ -0.45
NUP188-201ENST00000372577 ESPNB1AK53 854 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 UQCRFS1P1P0C7P4 283 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 CAGE1Q8TC20 777 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 C8orf76Q96K31 380 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 CDC5LQ99459 802 aaKnown RBP12.26□□□□□ -0.45
NUP188-201ENST00000372577 MEIS3Q99687 375 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 PDE1AP54750 535 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 SPC24Q8NBT2 197 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 DCTPP1Q9H773 170 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 ABCF2Q9UG63 623 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 TTC41PQ6P2S7 1318 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 KIF2AO00139 706 aaPredicted RBP12.26□□□□□ -0.45
NUP188-201ENST00000372577 SF3B2Q13435 895 aaKnown RBP12.26□□□□□ -0.45
NUP188-201ENST00000372577 SMC5Q8IY18 1101 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 SIRT1Q96EB6 747 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 ZSCAN30Q86W11 494 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 IQCA1Q86XH1 822 aa12.26□□□□□ -0.45
NUP188-201ENST00000372577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■■■ 29.5
NUP188-201ENST00000372577 CAVIN2O95810 425 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 SDSP20132 328 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms