RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 RHPN1Q8TCX5 695 aa20.3■□□□□ 0.84
PCIF1-201ENST00000372409 MARF1Q9Y4F3 1742 aaKnown RBP20.3■□□□□ 0.84
PCIF1-201ENST00000372409 PRIM1P49642 420 aaKnown RBP20.3■□□□□ 0.84
PCIF1-201ENST00000372409 PI4KAP2A4QPH2 592 aa20.29■□□□□ 0.84
PCIF1-201ENST00000372409 KCNQ3O43525 872 aa20.29■□□□□ 0.84
PCIF1-201ENST00000372409 RAB11FIP3O75154 756 aa20.29■□□□□ 0.84
PCIF1-201ENST00000372409 EIF4A1P60842 406 aaKnown RBP20.29■□□□□ 0.84
PCIF1-201ENST00000372409 PI4KAP1Q8N8J0 262 aa20.29■□□□□ 0.84
PCIF1-201ENST00000372409 PPP1R9BQ96SB3 815 aa20.29■□□□□ 0.84
PCIF1-201ENST00000372409 RBSNQ9H1K0 784 aa20.29■□□□□ 0.84
PCIF1-201ENST00000372409 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
PCIF1-201ENST00000372409 AOX1Q06278 1338 aa20.28■□□□□ 0.84
PCIF1-201ENST00000372409 TEFQ10587 303 aa20.28■□□□□ 0.84
PCIF1-201ENST00000372409 CUL4AQ13619 759 aa20.28■□□□□ 0.84
PCIF1-201ENST00000372409 IP6K1Q92551 441 aa20.28■□□□□ 0.84
PCIF1-201ENST00000372409 DNAAF4Q8WXU2 420 aa20.28■□□□□ 0.84
PCIF1-201ENST00000372409 OS9Q13438 667 aaPredicted RBP20.27■□□□□ 0.84
PCIF1-201ENST00000372409 TMEM63CQ9P1W3 806 aa20.27■□□□□ 0.84
PCIF1-201ENST00000372409 SYCE3A1L190 88 aa20.27■□□□□ 0.84
PCIF1-201ENST00000372409 BRD1O95696 1058 aa20.27■□□□□ 0.84
PCIF1-201ENST00000372409 KIF1BPQ96EK5 621 aa20.27■□□□□ 0.84
PCIF1-201ENST00000372409 POLA2Q14181 598 aa20.26■□□□□ 0.83
PCIF1-201ENST00000372409 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
PCIF1-201ENST00000372409 BTBD11A6QL63 1104 aa20.26■□□□□ 0.83
PCIF1-201ENST00000372409 PSME1Q06323 249 aa20.26■□□□□ 0.83
PCIF1-201ENST00000372409 MPRIPQ6WCQ1 1025 aa20.26■□□□□ 0.83
PCIF1-201ENST00000372409 LTN1O94822 1766 aa20.26■□□□□ 0.83
PCIF1-201ENST00000372409 CEMIPQ8WUJ3 1361 aa20.26■□□□□ 0.83
PCIF1-201ENST00000372409 ZNF530Q6P9A1 599 aaPredicted RBP20.26■□□□□ 0.83
PCIF1-201ENST00000372409 PI4K2BQ8TCG2 481 aa20.26■□□□□ 0.83
PCIF1-201ENST00000372409 FER1L4A9Z1Z3 1794 aa20.25■□□□□ 0.83
PCIF1-201ENST00000372409 BEND3Q5T5X7 828 aa20.25■□□□□ 0.83
PCIF1-201ENST00000372409 INTS4Q96HW7 963 aaKnown RBP20.25■□□□□ 0.83
PCIF1-201ENST00000372409 HSPA4P34932 840 aa20.25■□□□□ 0.83
PCIF1-201ENST00000372409 ESCO1Q5FWF5 840 aa20.25■□□□□ 0.83
PCIF1-201ENST00000372409 N4BP2Q86UW6 1770 aaPredicted RBP20.24■□□□□ 0.83
PCIF1-201ENST00000372409 CNTROBQ8N137 903 aa20.24■□□□□ 0.83
PCIF1-201ENST00000372409 MBD3O95983 291 aa20.23■□□□□ 0.83
PCIF1-201ENST00000372409 CWC27Q6UX04 472 aaKnown RBP20.23■□□□□ 0.83
PCIF1-201ENST00000372409 MSNP26038 577 aaKnown RBP20.22■□□□□ 0.83
PCIF1-201ENST00000372409 LRSAM1Q6UWE0 723 aa20.22■□□□□ 0.83
PCIF1-201ENST00000372409 KIAA1211Q6ZU35 1233 aa20.22■□□□□ 0.83
PCIF1-201ENST00000372409 ZSCAN30Q86W11 494 aa20.22■□□□□ 0.83
PCIF1-201ENST00000372409 LARP6Q9BRS8 491 aaKnown RBP20.22■□□□□ 0.83
PCIF1-201ENST00000372409 GDPD2Q9HCC8 539 aa20.22■□□□□ 0.83
PCIF1-201ENST00000372409 SGSM2O43147 1006 aa20.22■□□□□ 0.83
PCIF1-201ENST00000372409 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
PCIF1-201ENST00000372409 HOXB7P09629 217 aa20.21■□□□□ 0.83
PCIF1-201ENST00000372409 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
PCIF1-201ENST00000372409 RAD50Q92878 1312 aa20.21■□□□□ 0.83
PCIF1-201ENST00000372409 PLEKHO1Q53GL0 409 aaPredicted RBP20.2■□□□□ 0.82
PCIF1-201ENST00000372409 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
PCIF1-201ENST00000372409 AKAP4Q5JQC9 854 aa20.2■□□□□ 0.82
PCIF1-201ENST00000372409 CHMP4AQ9BY43 222 aa20.2■□□□□ 0.82
PCIF1-201ENST00000372409 C9orf78Q9NZ63 289 aaPredicted RBP20.2■□□□□ 0.82
PCIF1-201ENST00000372409 XPCQ01831 940 aaPredicted RBP20.2■□□□□ 0.82
PCIF1-201ENST00000372409 TPRNQ4KMQ1 711 aa20.2■□□□□ 0.82
PCIF1-201ENST00000372409 RNF214Q8ND24 703 aa20.2■□□□□ 0.82
PCIF1-201ENST00000372409 SNX14Q9Y5W7 946 aa20.2■□□□□ 0.82
PCIF1-201ENST00000372409 C1orf141Q5JVX7 400 aa20.19■□□□□ 0.82
PCIF1-201ENST00000372409 ADCY9O60503 1353 aa20.19■□□□□ 0.82
PCIF1-201ENST00000372409 KCNH5Q8NCM2 988 aa20.19■□□□□ 0.82
PCIF1-201ENST00000372409 MAP3K2Q9Y2U5 619 aa20.19■□□□□ 0.82
PCIF1-201ENST00000372409 USP54Q70EL1 1684 aa20.19■□□□□ 0.82
PCIF1-201ENST00000372409 DBF4Q9UBU7 674 aaPredicted RBP20.18■□□□□ 0.82
PCIF1-201ENST00000372409 CLASRPQ8N2M8 674 aaKnown RBP20.18■□□□□ 0.82
PCIF1-201ENST00000372409 LSG1Q9H089 658 aaKnown RBP20.18■□□□□ 0.82
PCIF1-201ENST00000372409 DIAPH3Q9NSV4 1193 aa20.18■□□□□ 0.82
PCIF1-201ENST00000372409 WDR33Q9C0J8 1336 aaKnown RBP20.18■□□□□ 0.82
PCIF1-201ENST00000372409 RGPD2P0DJD1 1756 aa20.18■□□□□ 0.82
PCIF1-201ENST00000372409 RASEFQ8IZ41 740 aa20.18■□□□□ 0.82
PCIF1-201ENST00000372409 IL17RAQ96F46 866 aa20.18■□□□□ 0.82
PCIF1-201ENST00000372409 EPB41L2O43491 1005 aaKnown RBP20.17■□□□□ 0.82
PCIF1-201ENST00000372409 PA2G4Q9UQ80 394 aaKnown RBP20.17■□□□□ 0.82
PCIF1-201ENST00000372409 GLRX3O76003 335 aaKnown RBP20.17■□□□□ 0.82
PCIF1-201ENST00000372409 AK2P54819 239 aa20.17■□□□□ 0.82
PCIF1-201ENST00000372409 PROSER3Q2NL68 480 aa20.17■□□□□ 0.82
PCIF1-201ENST00000372409 NFAT5O94916 1531 aa20.16■□□□□ 0.82
PCIF1-201ENST00000372409 CPA1P15085 419 aa20.16■□□□□ 0.82
PCIF1-201ENST00000372409 CWF19L2Q2TBE0 894 aaKnown RBP20.16■□□□□ 0.82
PCIF1-201ENST00000372409 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
PCIF1-201ENST00000372409 GADD45BO75293 160 aaPredicted RBP20.16■□□□□ 0.82
PCIF1-201ENST00000372409 PRAMEF22A3QJZ6 481 aa20.15■□□□□ 0.82
PCIF1-201ENST00000372409 USP48Q86UV5 1035 aa20.15■□□□□ 0.82
PCIF1-201ENST00000372409 SYAP1Q96A49 352 aaPredicted RBP20.15■□□□□ 0.82
PCIF1-201ENST00000372409 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
PCIF1-201ENST00000372409 KDM3BQ7LBC6 1761 aa20.15■□□□□ 0.82
PCIF1-201ENST00000372409 IFIT2P09913 472 aaKnown RBP20.15■□□□□ 0.82
PCIF1-201ENST00000372409 TTC41PQ6P2S7 1318 aa20.14■□□□□ 0.82
PCIF1-201ENST00000372409 CASTP20810 708 aaKnown RBP20.14■□□□□ 0.82
PCIF1-201ENST00000372409 ANKLE2Q86XL3 938 aa20.14■□□□□ 0.82
PCIF1-201ENST00000372409 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
PCIF1-201ENST00000372409 AIMP1Q12904 312 aaKnown RBP20.13■□□□□ 0.81
PCIF1-201ENST00000372409 PDLIM2Q96JY6 352 aa20.13■□□□□ 0.81
PCIF1-201ENST00000372409 TTC14Q96N46 770 aa20.13■□□□□ 0.81
PCIF1-201ENST00000372409 LIMCH1Q9UPQ0 1083 aa20.13■□□□□ 0.81
PCIF1-201ENST00000372409 GIGYF1O75420 1035 aaPredicted RBP20.13■□□□□ 0.81
PCIF1-201ENST00000372409 GCP02774 474 aa20.13■□□□□ 0.81
PCIF1-201ENST00000372409 RUFY3Q7L099 469 aa20.13■□□□□ 0.81
PCIF1-201ENST00000372409 RUFY2Q8WXA3 655 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms