RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 TMOD3Q9NYL9 352 aa12.05□□□□□ -0.48
KDM4A-201ENST00000372396 PNPLA6Q8IY17 1366 aa12.05□□□□□ -0.48
KDM4A-201ENST00000372396 PDCL2Q8N4E4 241 aa12.05□□□□□ -0.48
KDM4A-201ENST00000372396 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
KDM4A-201ENST00000372396 TMEM94Q12767 1356 aa12.05□□□□□ -0.48
KDM4A-201ENST00000372396 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
KDM4A-201ENST00000372396 TNNQ9UQP3 1299 aa12.05□□□□□ -0.48
KDM4A-201ENST00000372396 ADGRL3Q9HAR2 1447 aa12.05□□□□□ -0.48
KDM4A-201ENST00000372396 CDC42BPGQ6DT37 1551 aa12.04□□□□□ -0.48
KDM4A-201ENST00000372396 HIP1O00291 1037 aa12.04□□□□□ -0.48
KDM4A-201ENST00000372396 HOXB7P09629 217 aa12.04□□□□□ -0.48
KDM4A-201ENST00000372396 CALCOCO1Q9P1Z2 691 aa12.04□□□□□ -0.48
KDM4A-201ENST00000372396 ERBB4Q15303 1308 aa12.04□□□□□ -0.48
KDM4A-201ENST00000372396 IGSF1Q8N6C5 1336 aa12.04□□□□□ -0.48
KDM4A-201ENST00000372396 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
KDM4A-201ENST00000372396 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 RNMTO43148 476 aaKnown RBP12.03□□□□□ -0.48
KDM4A-201ENST00000372396 IGSF3O75054 1194 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 STARD3NLO95772 234 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
KDM4A-201ENST00000372396 NUCB1Q02818 461 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 KIF1BPQ96EK5 621 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 CCDC39Q9UFE4 941 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
KDM4A-201ENST00000372396 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
KDM4A-201ENST00000372396 RNF20Q5VTR2 975 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
KDM4A-201ENST00000372396 ANKRD44Q8N8A2 993 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 ZCRB1Q8TBF4 217 aaKnown RBP12.03□□□□□ -0.48
KDM4A-201ENST00000372396 ZSCAN20P17040 1043 aaPredicted RBP12.03□□□□□ -0.48
KDM4A-201ENST00000372396 ARHGEF28Q8N1W1 1705 aaKnown RBP12.03□□□□□ -0.48
KDM4A-201ENST00000372396 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 GOLGA6L6A8MZA4 724 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 RABEP1Q15276 862 aa12.03□□□□□ -0.48
KDM4A-201ENST00000372396 CABLES1Q8TDN4 633 aa12.02□□□□□ -0.48
KDM4A-201ENST00000372396 CHMP4CQ96CF2 233 aa12.02□□□□□ -0.48
KDM4A-201ENST00000372396 LRRFIP2Q9Y608 721 aaKnown RBP12.02□□□□□ -0.48
KDM4A-201ENST00000372396 DIP2AQ14689 1571 aa12.02□□□□□ -0.49
KDM4A-201ENST00000372396 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
KDM4A-201ENST00000372396 TEX13AQ9BXU3 409 aaPredicted RBP12.02□□□□□ -0.49
KDM4A-201ENST00000372396 EXOC6BQ9Y2D4 811 aa12.02□□□□□ -0.49
KDM4A-201ENST00000372396 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.49
KDM4A-201ENST00000372396 BMP2KLQ5H9B9 411 aa12.02□□□□□ -0.49
KDM4A-201ENST00000372396 NBPF6Q5VWK0 638 aa12.02□□□□□ -0.49
KDM4A-201ENST00000372396 DCAF5Q96JK2 942 aa12.02□□□□□ -0.49
KDM4A-201ENST00000372396 NBPF4Q96M43 638 aa12.02□□□□□ -0.49
KDM4A-201ENST00000372396 ZNF622Q969S3 477 aaKnown RBP eCLIP12.01□□□□□ -0.499e-7■■□□□ 12.7
KDM4A-201ENST00000372396 PHF23Q9BUL5 403 aaPredicted RBP12.01□□□□□ -0.49
KDM4A-201ENST00000372396 KRT24Q2M2I5 525 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 SMC5Q8IY18 1101 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 PI4KAP1Q8N8J0 262 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 CHPF2Q9P2E5 772 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 ALDH1L1O75891 902 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 RGS22Q8NE09 1264 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 MEIS3Q99687 375 aa12.01□□□□□ -0.49
KDM4A-201ENST00000372396 MAP3K2Q9Y2U5 619 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 GOLGA6L4A6NEF3 574 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 EXOC5O00471 708 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 MX1P20591 662 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
KDM4A-201ENST00000372396 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 ZBTB7BO15156 539 aaPredicted RBP12□□□□□ -0.49
KDM4A-201ENST00000372396 ZBTB22O15209 634 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 IL2RBP14784 551 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
KDM4A-201ENST00000372396 SLAIN2Q9P270 581 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
KDM4A-201ENST00000372396 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
KDM4A-201ENST00000372396 MYD88Q99836 296 aa12□□□□□ -0.49
KDM4A-201ENST00000372396 PTCD1O75127 700 aaKnown RBP11.99□□□□□ -0.49
KDM4A-201ENST00000372396 MCM2P49736 904 aa11.99□□□□□ -0.49
KDM4A-201ENST00000372396 ARHGEF25Q86VW2 580 aa11.99□□□□□ -0.49
KDM4A-201ENST00000372396 FSD1Q9BTV5 496 aa11.99□□□□□ -0.49
KDM4A-201ENST00000372396 USP32Q8NFA0 1604 aa11.99□□□□□ -0.49
KDM4A-201ENST00000372396 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
KDM4A-201ENST00000372396 PCDH11XQ9BZA7 1347 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 PCDH11YQ9BZA8 1340 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 ZNF853P0CG23 659 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 KSR2Q6VAB6 950 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 IFT172Q9UG01 1749 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 TOM1O60784 492 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 GOLGA6L1Q8N7Z2 621 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 IL1RAPL2Q9NP60 686 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 ERICH4A6NGS2 130 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 MCM5P33992 734 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 ZRSR1Q15695 479 aaKnown RBP11.98□□□□□ -0.49
KDM4A-201ENST00000372396 AACSQ86V21 672 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 NUCB2P80303 420 aa11.98□□□□□ -0.49
KDM4A-201ENST00000372396 CPS1P31327 1500 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 FER1L4A9Z1Z3 1794 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 SMARCA5O60264 1052 aaPredicted RBP11.97□□□□□ -0.49
KDM4A-201ENST00000372396 GLRX3O76003 335 aaKnown RBP11.97□□□□□ -0.49
KDM4A-201ENST00000372396 ATP8B2P98198 1209 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 DCTPP1Q9H773 170 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
KDM4A-201ENST00000372396 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms