RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 GOLGA6L22H0YM25 854 aa20.8■□□□□ 0.92
VEGFA-205ENST00000372067 RABEP1Q15276 862 aa20.8■□□□□ 0.92
VEGFA-205ENST00000372067 DDX58O95786 925 aaKnown RBP20.79■□□□□ 0.92
VEGFA-205ENST00000372067 CD2BP2O95400 341 aaKnown RBP20.79■□□□□ 0.92
VEGFA-205ENST00000372067 CWF19L2Q2TBE0 894 aaKnown RBP20.79■□□□□ 0.92
VEGFA-205ENST00000372067 ANTXR1Q9H6X2 564 aa20.79■□□□□ 0.92
VEGFA-205ENST00000372067 CCDC9Q9Y3X0 531 aaKnown RBP20.79■□□□□ 0.92
VEGFA-205ENST00000372067 TPM2P07951 284 aa20.78■□□□□ 0.92
VEGFA-205ENST00000372067 NEK4P51957 841 aa20.78■□□□□ 0.92
VEGFA-205ENST00000372067 PAXIP1Q6ZW49 1069 aaPredicted RBP20.78■□□□□ 0.92
VEGFA-205ENST00000372067 SIL1Q9H173 461 aa20.78■□□□□ 0.92
VEGFA-205ENST00000372067 SPG7Q9UQ90 795 aa20.78■□□□□ 0.92
VEGFA-205ENST00000372067 RGS12O14924 1447 aa20.78■□□□□ 0.92
VEGFA-205ENST00000372067 JARID2Q92833 1246 aaPredicted RBP20.78■□□□□ 0.92
VEGFA-205ENST00000372067 CHMP3Q9Y3E7 222 aa20.78■□□□□ 0.92
VEGFA-205ENST00000372067 ATP10DQ9P241 1426 aa20.77■□□□□ 0.92
VEGFA-205ENST00000372067 NEXNQ0ZGT2 675 aa20.77■□□□□ 0.92
VEGFA-205ENST00000372067 NFATC2IPQ8NCF5 419 aa20.77■□□□□ 0.92
VEGFA-205ENST00000372067 ESPNB1AK53 854 aa20.77■□□□□ 0.92
VEGFA-205ENST00000372067 TRAK2O60296 914 aa20.77■□□□□ 0.92
VEGFA-205ENST00000372067 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
VEGFA-205ENST00000372067 STRN4Q9NRL3 753 aa20.77■□□□□ 0.92
VEGFA-205ENST00000372067 KIAA1211Q6ZU35 1233 aa20.77■□□□□ 0.91
VEGFA-205ENST00000372067 PRDM11Q9NQV5 511 aa20.77■□□□□ 0.91
VEGFA-205ENST00000372067 PIK3C2AO00443 1686 aa20.77■□□□□ 0.91
VEGFA-205ENST00000372067 NRKQ7Z2Y5 1582 aa20.76■□□□□ 0.91
VEGFA-205ENST00000372067 BABAM1Q9NWV8 329 aa20.76■□□□□ 0.91
VEGFA-205ENST00000372067 TOPAZ1Q8N9V7 1692 aa20.76■□□□□ 0.91
VEGFA-205ENST00000372067 IFIT2P09913 472 aaKnown RBP20.75■□□□□ 0.91
VEGFA-205ENST00000372067 USP26Q9BXU7 913 aa20.75■□□□□ 0.91
VEGFA-205ENST00000372067 TMEM94Q12767 1356 aa20.75■□□□□ 0.91
VEGFA-205ENST00000372067 KCNJ4P48050 445 aa20.75■□□□□ 0.91
VEGFA-205ENST00000372067 TOM1L2Q6ZVM7 507 aa20.75■□□□□ 0.91
VEGFA-205ENST00000372067 SNX21Q969T3 373 aa20.75■□□□□ 0.91
VEGFA-205ENST00000372067 DDX11L8A8MPP1 907 aa20.74■□□□□ 0.91
VEGFA-205ENST00000372067 CADPS2Q86UW7 1296 aa20.74■□□□□ 0.91
VEGFA-205ENST00000372067 CLASRPQ8N2M8 674 aaKnown RBP20.74■□□□□ 0.91
VEGFA-205ENST00000372067 RHPN1Q8TCX5 695 aa20.74■□□□□ 0.91
VEGFA-205ENST00000372067 PA2G4Q9UQ80 394 aaKnown RBP20.74■□□□□ 0.91
VEGFA-205ENST00000372067 CABP4P57796 275 aa20.74■□□□□ 0.91
VEGFA-205ENST00000372067 DDX54Q8TDD1 881 aaKnown RBP20.74■□□□□ 0.91
VEGFA-205ENST00000372067 TNPO1Q92973 898 aaKnown RBP20.74■□□□□ 0.91
VEGFA-205ENST00000372067 FOXD4L6Q3SYB3 417 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-205ENST00000372067 FOXD4L3Q6VB84 417 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-205ENST00000372067 PRDM10Q9NQV6 1147 aa20.73■□□□□ 0.91
VEGFA-205ENST00000372067 EVA1CP58658 441 aa20.73■□□□□ 0.91
VEGFA-205ENST00000372067 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.91
VEGFA-205ENST00000372067 GOLGA6L3A6NEY3 463 aa20.72■□□□□ 0.91
VEGFA-205ENST00000372067 SSFA2P28290 1259 aa20.72■□□□□ 0.91
VEGFA-205ENST00000372067 KIF1BPQ96EK5 621 aa20.72■□□□□ 0.91
VEGFA-205ENST00000372067 HSP90AB4PQ58FF6 505 aa20.72■□□□□ 0.91
VEGFA-205ENST00000372067 HDAC5Q9UQL6 1122 aa20.72■□□□□ 0.91
VEGFA-205ENST00000372067 GIGYF1O75420 1035 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-205ENST00000372067 UPF3BQ9BZI7 483 aaKnown RBP20.71■□□□□ 0.91
VEGFA-205ENST00000372067 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
VEGFA-205ENST00000372067 NPHP3Q7Z494 1330 aa20.71■□□□□ 0.91
VEGFA-205ENST00000372067 KSR2Q6VAB6 950 aa20.7■□□□□ 0.9
VEGFA-205ENST00000372067 GPATCH3Q96I76 525 aa20.7■□□□□ 0.9
VEGFA-205ENST00000372067 MYD88Q99836 296 aa20.7■□□□□ 0.9
VEGFA-205ENST00000372067 SOS1Q07889 1333 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-205ENST00000372067 IFNL2Q8IZJ0 200 aa20.7■□□□□ 0.9
VEGFA-205ENST00000372067 HYPKQ9NX55 129 aa20.7■□□□□ 0.9
VEGFA-205ENST00000372067 BEND3Q5T5X7 828 aa20.7■□□□□ 0.9
VEGFA-205ENST00000372067 CWC27Q6UX04 472 aaKnown RBP20.69■□□□□ 0.9
VEGFA-205ENST00000372067 XAGE3Q8WTP9 111 aa20.69■□□□□ 0.9
VEGFA-205ENST00000372067 KIF2CQ99661 725 aa20.69■□□□□ 0.9
VEGFA-205ENST00000372067 ERBB3P21860 1342 aa20.69■□□□□ 0.9
VEGFA-205ENST00000372067 RAB11FIP3O75154 756 aa20.69■□□□□ 0.9
VEGFA-205ENST00000372067 COPS6Q7L5N1 327 aa20.69■□□□□ 0.9
VEGFA-205ENST00000372067 AACSQ86V21 672 aa20.69■□□□□ 0.9
VEGFA-205ENST00000372067 ESYT1Q9BSJ8 1104 aa20.69■□□□□ 0.9
VEGFA-205ENST00000372067 XRN1Q8IZH2 1706 aaKnown RBP20.68■□□□□ 0.9
VEGFA-205ENST00000372067 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
VEGFA-205ENST00000372067 CNTROBQ8N137 903 aa20.68■□□□□ 0.9
VEGFA-205ENST00000372067 ZNF790Q6PG37 636 aa20.68■□□□□ 0.9
VEGFA-205ENST00000372067 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
VEGFA-205ENST00000372067 SMAP1Q8IYB5 467 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-205ENST00000372067 ARID3AQ99856 593 aa20.68■□□□□ 0.9
VEGFA-205ENST00000372067 HOXB7P09629 217 aa20.67■□□□□ 0.9
VEGFA-205ENST00000372067 MCTP1Q6DN14 999 aa20.67■□□□□ 0.9
VEGFA-205ENST00000372067 ATP5J2-PTCD1G3V325 749 aa20.67■□□□□ 0.9
VEGFA-205ENST00000372067 KLHL34Q8N239 644 aa20.67■□□□□ 0.9
VEGFA-205ENST00000372067 CCDC8Q9H0W5 538 aaPredicted RBP20.67■□□□□ 0.9
VEGFA-205ENST00000372067 DDX49Q9Y6V7 483 aaKnown RBP20.66■□□□□ 0.9
VEGFA-205ENST00000372067 SSH3Q8TE77 659 aa20.66■□□□□ 0.9
VEGFA-205ENST00000372067 FMN2Q9NZ56 1722 aa20.66■□□□□ 0.9
VEGFA-205ENST00000372067 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
VEGFA-205ENST00000372067 CHMLP26374 656 aa20.66■□□□□ 0.9
VEGFA-205ENST00000372067 ZNF496Q96IT1 587 aaPredicted RBP20.66■□□□□ 0.9
VEGFA-205ENST00000372067 CIZ1Q9ULV3 898 aaPredicted RBP20.65■□□□□ 0.9
VEGFA-205ENST00000372067 VIRMAQ69YN4 1812 aaKnown RBP20.65■□□□□ 0.9
VEGFA-205ENST00000372067 C1orf167Q5SNV9 1468 aa20.65■□□□□ 0.9
VEGFA-205ENST00000372067 LARP1Q6PKG0 1096 aaKnown RBP20.64■□□□□ 0.9
VEGFA-205ENST00000372067 IPO4Q8TEX9 1081 aaKnown RBP20.64■□□□□ 0.9
VEGFA-205ENST00000372067 LARP6Q9BRS8 491 aaKnown RBP20.64■□□□□ 0.9
VEGFA-205ENST00000372067 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.9
VEGFA-205ENST00000372067 GRM8O00222 908 aa20.64■□□□□ 0.89
VEGFA-205ENST00000372067 KLHDC4Q8TBB5 520 aa20.64■□□□□ 0.89
VEGFA-205ENST00000372067 SLC52A2Q9HAB3 445 aa20.64■□□□□ 0.89
VEGFA-205ENST00000372067 TMEM51Q9NW97 253 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms