RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 FBLN1P23142 703 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 KRT28Q7Z3Y7 464 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 CCDC85AQ96PX6 553 aaPredicted RBP13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 CCDC196A0A1B0GTZ2 297 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 ZFYVE9O95405 1425 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 INSRP06213 1382 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 HMGB2P26583 209 aaKnown RBP13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 C8orf34Q49A92 452 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 SOGA3Q5TF21 947 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 SMC5Q8IY18 1101 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 TEX13AQ9BXU3 409 aaPredicted RBP13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 VAMP4O75379 141 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 BRPF1P55201 1214 aaPredicted RBP13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 C8orf58Q8NAV2 365 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 SDSP20132 328 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 ANAPC15P60006 121 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 KLHL40Q2TBA0 621 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 CEP131Q9UPN4 1083 aa13.9□□□□□ -0.18
DEPDC1-201ENST00000370966 PDE1AP54750 535 aa13.9□□□□□ -0.19
DEPDC1-201ENST00000370966 SETQ01105 290 aaPredicted RBP13.9□□□□□ -0.19
DEPDC1-201ENST00000370966 HMG20BQ9P0W2 317 aa13.9□□□□□ -0.19
DEPDC1-201ENST00000370966 TEX14Q8IWB6 1497 aa13.9□□□□□ -0.19
DEPDC1-201ENST00000370966 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 CAGE1Q8TC20 777 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 SNX21Q969T3 373 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 CTAGE5O15320 804 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 ANO10Q9NW15 660 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 ALDH1L1O75891 902 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 MAP3K12Q12852 859 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 MPNDQ8N594 471 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 ABCF2Q9UG63 623 aa13.89□□□□□ -0.19
DEPDC1-201ENST00000370966 SNRPA1P09661 255 aaKnown RBP13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 NAPBQ9H115 298 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 NPATQ14207 1427 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 C8orf76Q96K31 380 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 LUC7LQ9NQ29 371 aaKnown RBP13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 STX6O43752 255 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 ATP8B2P98198 1209 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 RLBP1P12271 317 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 CT47A1Q5JQC4 288 aaPredicted RBP13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 DCTPP1Q9H773 170 aa13.88□□□□□ -0.19
DEPDC1-201ENST00000370966 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
DEPDC1-201ENST00000370966 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
DEPDC1-201ENST00000370966 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
DEPDC1-201ENST00000370966 FLT4P35916 1363 aa13.87□□□□□ -0.19
DEPDC1-201ENST00000370966 ZNF213O14771 459 aa13.87□□□□□ -0.19
DEPDC1-201ENST00000370966 KRT18P05783 430 aaKnown RBP13.87□□□□□ -0.19
DEPDC1-201ENST00000370966 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
DEPDC1-201ENST00000370966 TTLL5Q6EMB2 1281 aa13.87□□□□□ -0.19
DEPDC1-201ENST00000370966 ANKRD18BA2A2Z9 1011 aa13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 NUTM2BA6NNL0 878 aaPredicted RBP13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 NUTM2EB1AL46 878 aaPredicted RBP13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 UBE3BQ7Z3V4 1068 aa13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 NUTM2AQ8IVF1 878 aaPredicted RBP13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 TXLNBQ8N3L3 684 aa13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 ZNF287Q9HBT7 754 aa13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 CWC25Q9NXE8 425 aaPredicted RBP13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 SOS1Q07889 1333 aaPredicted RBP13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 A0A1W2PP64 1363 aa13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 TRMT112Q9UI30 125 aaKnown RBP13.86□□□□□ -0.19
DEPDC1-201ENST00000370966 BMP2KQ9NSY1 1161 aaPredicted RBP13.85□□□□□ -0.19
DEPDC1-201ENST00000370966 ABCC2Q92887 1545 aa13.85□□□□□ -0.19
DEPDC1-201ENST00000370966 TMX3Q96JJ7 454 aa13.85□□□□□ -0.19
DEPDC1-201ENST00000370966 CAVIN2O95810 425 aa13.85□□□□□ -0.19
DEPDC1-201ENST00000370966 SLC5A1P13866 664 aa13.85□□□□□ -0.19
DEPDC1-201ENST00000370966 AKAP4Q5JQC9 854 aa13.85□□□□□ -0.19
DEPDC1-201ENST00000370966 CAMK4Q16566 473 aa13.85□□□□□ -0.19
DEPDC1-201ENST00000370966 ESYT1Q9BSJ8 1104 aa13.85□□□□□ -0.19
DEPDC1-201ENST00000370966 UQCRHLA0A096LP55 91 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 UQCRHP07919 91 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 UBE2HP62256 183 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 TTF1Q15361 905 aaPredicted RBP13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 NEK1Q96PY6 1258 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 GJB2P29033 226 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 CFAP100Q494V2 611 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 KSR2Q6VAB6 950 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 MYO6Q9UM54 1294 aa13.84□□□□□ -0.19
DEPDC1-201ENST00000370966 MCM5P33992 734 aa13.83□□□□□ -0.19
DEPDC1-201ENST00000370966 SAMD9Q5K651 1589 aa13.83□□□□□ -0.19
DEPDC1-201ENST00000370966 IQCA1Q86XH1 822 aa13.83□□□□□ -0.19
DEPDC1-201ENST00000370966 CHPF2Q9P2E5 772 aa13.83□□□□□ -0.19
DEPDC1-201ENST00000370966 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
DEPDC1-201ENST00000370966 LDHAL6AQ6ZMR3 332 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms