RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 ATP5J2-PTCD1G3V325 749 aa13.12□□□□□ -0.31
PDCD11-201ENST00000369797 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
PDCD11-201ENST00000369797 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
PDCD11-201ENST00000369797 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
PDCD11-201ENST00000369797 CCT2P78371 535 aaKnown RBP13.12□□□□□ -0.31
PDCD11-201ENST00000369797 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
PDCD11-201ENST00000369797 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
PDCD11-201ENST00000369797 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
PDCD11-201ENST00000369797 RAB34Q9BZG1 259 aa13.12□□□□□ -0.31
PDCD11-201ENST00000369797 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
PDCD11-201ENST00000369797 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
PDCD11-201ENST00000369797 MTERF4Q7Z6M4 381 aaKnown RBP13.12□□□□□ -0.31
PDCD11-201ENST00000369797 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
PDCD11-201ENST00000369797 RFC4P35249 363 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 JARID2Q92833 1246 aaPredicted RBP13.11□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 EHMT1Q9H9B1 1298 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 SAMM50Q9Y512 469 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 CA8P35219 290 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 CATIPQ7Z7H3 387 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 PSMD1Q99460 953 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 SYCE3A1L190 88 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC66A2RUB6 948 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 LDHAL6AQ6ZMR3 332 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 DRC1Q96MC2 740 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 USP8P40818 1118 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 CHRNA2Q15822 529 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDCD11-201ENST00000369797 RNF41Q9H4P4 317 aaPredicted RBP13.1□□□□□ -0.31
PDCD11-201ENST00000369797 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 GSTTP1A0A1W2PQM5 241 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 BACH2Q9BYV9 841 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 GOLIM4O00461 696 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 FBXO31Q5XUX0 539 aaPredicted RBP13.1□□□□□ -0.31
PDCD11-201ENST00000369797 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 CPLX3Q8WVH0 158 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
PDCD11-201ENST00000369797 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
PDCD11-201ENST00000369797 NESP48681 1621 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 SLFN5Q08AF3 891 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 TDRD12Q587J7 1177 aaKnown RBP13.09□□□□□ -0.31
PDCD11-201ENST00000369797 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 BAG4O95429 457 aaKnown RBP13.09□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC184Q52MB2 194 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 TCERG1LQ5VWI1 586 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 DYDC1Q8WWB3 177 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
PDCD11-201ENST00000369797 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
PDCD11-201ENST00000369797 IDEP14735 1019 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 HAND2P61296 217 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
PDCD11-201ENST00000369797 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
PDCD11-201ENST00000369797 COMMD10Q9Y6G5 202 aa13.08□□□□□ -0.31
PDCD11-201ENST00000369797 PHAXQ9H814 394 aaKnown RBP13.08□□□□□ -0.32
PDCD11-201ENST00000369797 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
PDCD11-201ENST00000369797 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
PDCD11-201ENST00000369797 FERMT2Q96AC1 680 aa13.08□□□□□ -0.32
PDCD11-201ENST00000369797 TMX1Q9H3N1 280 aa13.08□□□□□ -0.32
PDCD11-201ENST00000369797 CTNNA2P26232 953 aa13.08□□□□□ -0.32
PDCD11-201ENST00000369797 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
PDCD11-201ENST00000369797 PUF60Q9UHX1 559 aaKnown RBP13.07□□□□□ -0.32
PDCD11-201ENST00000369797 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 F8W031 263 aaPredicted RBP13.07□□□□□ -0.32
PDCD11-201ENST00000369797 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 SFPQP23246 707 aaKnown RBP eCLIP13.07□□□□□ -0.32
PDCD11-201ENST00000369797 CCDC91Q7Z6B0 441 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 CNNM3Q8NE01 707 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 KAT14Q9H8E8 782 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 BAG3O95817 575 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 LDHCP07864 332 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 TTC16Q8NEE8 873 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
PDCD11-201ENST00000369797 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 PRKCSHP14314 528 aaPredicted RBP13.07□□□□□ -0.32
PDCD11-201ENST00000369797 TMEM67Q5HYA8 995 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 NBPF6Q5VWK0 638 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 LUZP1Q86V48 1076 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
PDCD11-201ENST00000369797 NBPF4Q96M43 638 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 MYO1BO43795 1136 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 PPP1R42Q7Z4L9 355 aa13.07□□□□□ -0.32
PDCD11-201ENST00000369797 CWC25Q9NXE8 425 aaPredicted RBP13.07□□□□□ -0.32
PDCD11-201ENST00000369797 HMGB1P09429 215 aaKnown RBP13.06□□□□□ -0.32
PDCD11-201ENST00000369797 ST5P78524 1137 aa13.06□□□□□ -0.32
PDCD11-201ENST00000369797 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
PDCD11-201ENST00000369797 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms