RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 RAPGEF6Q8TEU7 1601 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 RLBP1P12271 317 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 TRIM22Q8IYM9 498 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 GOLGA8BA8MQT2 603 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 ANXA1P04083 346 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 STIM1Q13586 685 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 CFAP45Q9UL16 551 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 IDH1O75874 414 aaKnown RBP13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
PLXNA3-201ENST00000369682 RAB11FIP3O75154 756 aa13.46□□□□□ -0.25
PLXNA3-201ENST00000369682 NOLC1Q14978 699 aaKnown RBP eCLIP13.46□□□□□ -0.25
PLXNA3-201ENST00000369682 STX1AQ16623 288 aa13.46□□□□□ -0.25
PLXNA3-201ENST00000369682 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
PLXNA3-201ENST00000369682 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.25
PLXNA3-201ENST00000369682 NME9Q86XW9 330 aa13.46□□□□□ -0.25
PLXNA3-201ENST00000369682 CRACR2AQ9BSW2 395 aa13.46□□□□□ -0.25
PLXNA3-201ENST00000369682 PTGS1P23219 599 aa13.46□□□□□ -0.26
PLXNA3-201ENST00000369682 TTC22Q5TAA0 569 aa13.46□□□□□ -0.26
PLXNA3-201ENST00000369682 DRC1Q96MC2 740 aa13.46□□□□□ -0.26
PLXNA3-201ENST00000369682 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 NUP88Q99567 741 aaPredicted RBP13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 ERLIN2O94905 339 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 CLCN1P35523 988 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 CCDC158Q5M9N0 1113 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 LIMCH1Q9UPQ0 1083 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 WAPLQ7Z5K2 1190 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 CALCOCO1Q9P1Z2 691 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 CCDC148Q8NFR7 591 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 PLB1Q6P1J6 1458 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 MCM6Q14566 821 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
PLXNA3-201ENST00000369682 CTR9Q6PD62 1173 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 RSPH14Q9UHP6 348 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 DNAJC21Q5F1R6 531 aaKnown RBP13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 KIF5CO60282 957 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 SEPT7Q16181 437 aaKnown RBP13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 CCDC186Q7Z3E2 898 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 CPA1P15085 419 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 SDSP20132 328 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 NUCB1Q02818 461 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 SPTY2D1Q68D10 685 aaPredicted RBP13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 TMX3Q96JJ7 454 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 ABCC5O15440 1437 aa13.44□□□□□ -0.26
PLXNA3-201ENST00000369682 DNAJC25Q9H1X3 360 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 ATF3P18847 181 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 TIGD1Q96MW7 591 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 RABEP2Q9H5N1 569 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 SMTNL1A8MU46 457 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 LRSAM1Q6UWE0 723 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 ZNF165P49910 485 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 ANO10Q9NW15 660 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 TERF1P54274 439 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 C8orf76Q96K31 380 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 UBAC1Q9BSL1 405 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 RTEL1-TNFRSF6BF6WH68 1400 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 RBSNQ9H1K0 784 aa13.43□□□□□ -0.26
PLXNA3-201ENST00000369682 CAPZA3Q96KX2 299 aa13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 CCDC94Q9BW85 323 aaPredicted RBP13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 UBA5Q9GZZ9 404 aa13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 KIF21AQ7Z4S6 1674 aa13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 PLEKHO1Q53GL0 409 aaPredicted RBP13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 CCDC12Q8WUD4 166 aaPredicted RBP13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.42□□□□□ -0.267e-7■■■■□ 24.5
PLXNA3-201ENST00000369682 MYD88Q99836 296 aa13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 GNG11P61952 73 aa13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 PHACTR2O75167 634 aa13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 USP5P45974 858 aa13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 KRT222Q8N1A0 295 aa13.42□□□□□ -0.26
PLXNA3-201ENST00000369682 KARSQ15046 597 aaKnown RBP13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 MAATS1Q7Z4T9 603 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 GOLGA6L10A0A0M3HER8 536 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 TAF7Q15545 349 aaPredicted RBP13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 KLHL40Q2TBA0 621 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 SHTN1A0MZ66 631 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 CABP4P57796 275 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 MINDY4BA8MYZ0 360 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■■■□ 19.5
PLXNA3-201ENST00000369682 SKILP12757 684 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 LUZP1Q86V48 1076 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 TAF4BQ92750 862 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 SYCP1Q15431 976 aa13.41□□□□□ -0.26
PLXNA3-201ENST00000369682 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
PLXNA3-201ENST00000369682 GTF2A1P52655 376 aaPredicted RBP13.4□□□□□ -0.26
PLXNA3-201ENST00000369682 ADGBQ8N7X0 1667 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms