RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 USP42Q9H9J4 1324 aaKnown RBP27.23■■□□□ 1.95
SMNDC1-201ENST00000369592 ZNF316A6NFI3 1004 aaPredicted RBP27.23■■□□□ 1.95
SMNDC1-201ENST00000369592 FMNL2Q96PY5 1086 aa27.23■■□□□ 1.95
SMNDC1-201ENST00000369592 KIF13BQ9NQT8 1826 aa27.23■■□□□ 1.95
SMNDC1-201ENST00000369592 KLHL34Q8N239 644 aa27.22■■□□□ 1.95
SMNDC1-201ENST00000369592 NEFMP07197 916 aa27.21■■□□□ 1.95
SMNDC1-201ENST00000369592 MMP10P09238 476 aa27.21■■□□□ 1.95
SMNDC1-201ENST00000369592 TAF7Q15545 349 aaPredicted RBP27.21■■□□□ 1.95
SMNDC1-201ENST00000369592 TEX13AQ9BXU3 409 aaPredicted RBP27.21■■□□□ 1.95
SMNDC1-201ENST00000369592 KDM3BQ7LBC6 1761 aa27.21■■□□□ 1.95
SMNDC1-201ENST00000369592 PELP1Q8IZL8 1130 aaKnown RBP27.2■■□□□ 1.94
SMNDC1-201ENST00000369592 SRP68Q9UHB9 627 aaKnown RBP27.2■■□□□ 1.94
SMNDC1-201ENST00000369592 STARD3NLO95772 234 aa27.19■■□□□ 1.94
SMNDC1-201ENST00000369592 EIF5P55010 431 aaKnown RBP27.19■■□□□ 1.94
SMNDC1-201ENST00000369592 MAPK8IP3Q9UPT6 1336 aa27.18■■□□□ 1.94
SMNDC1-201ENST00000369592 COL15A1P39059 1388 aa27.18■■□□□ 1.94
SMNDC1-201ENST00000369592 CEP350Q5VT06 3117 aa27.18■■□□□ 1.94
SMNDC1-201ENST00000369592 KIAA1551Q9HCM1 1747 aa27.17■■□□□ 1.94
SMNDC1-201ENST00000369592 FKBP8Q14318 412 aa27.17■■□□□ 1.94
SMNDC1-201ENST00000369592 TMPOP42166 694 aaKnown RBP27.16■■□□□ 1.94
SMNDC1-201ENST00000369592 NARFQ9UHQ1 456 aa27.16■■□□□ 1.94
SMNDC1-201ENST00000369592 ADAMTS8Q9UP79 889 aa27.16■■□□□ 1.94
SMNDC1-201ENST00000369592 GOLGB1Q14789 3259 aaKnown RBP27.15■■□□□ 1.94
SMNDC1-201ENST00000369592 THUMPD2Q9BTF0 503 aaKnown RBP27.15■■□□□ 1.94
SMNDC1-201ENST00000369592 BCL2L12Q9HB09 334 aa27.15■■□□□ 1.94
SMNDC1-201ENST00000369592 USP16Q9Y5T5 823 aa27.15■■□□□ 1.94
SMNDC1-201ENST00000369592 PRAMEF22A3QJZ6 481 aa27.14■■□□□ 1.94
SMNDC1-201ENST00000369592 TM4SF1P30408 202 aa27.14■■□□□ 1.94
SMNDC1-201ENST00000369592 C10orf71Q711Q0 1435 aa27.14■■□□□ 1.93
SMNDC1-201ENST00000369592 CANXP27824 592 aaKnown RBP27.13■■□□□ 1.93
SMNDC1-201ENST00000369592 MIS18AQ9NYP9 233 aa27.13■■□□□ 1.93
SMNDC1-201ENST00000369592 A1BGP04217 495 aa27.12■■□□□ 1.93
SMNDC1-201ENST00000369592 SNRPA1P09661 255 aaKnown RBP27.12■■□□□ 1.93
SMNDC1-201ENST00000369592 RIPK4P57078 832 aa27.12■■□□□ 1.93
SMNDC1-201ENST00000369592 DDR1Q08345 913 aa27.12■■□□□ 1.93
SMNDC1-201ENST00000369592 USPL1Q5W0Q7 1092 aa27.12■■□□□ 1.93
SMNDC1-201ENST00000369592 PNISRQ8TF01 805 aaKnown RBP27.12■■□□□ 1.93
SMNDC1-201ENST00000369592 RUNDC1Q96C34 613 aa27.12■■□□□ 1.93
SMNDC1-201ENST00000369592 IL6STP40189 918 aaPredicted RBP27.11■■□□□ 1.93
SMNDC1-201ENST00000369592 WDR43Q15061 677 aaKnown RBP eCLIP27.1■■□□□ 1.93
SMNDC1-201ENST00000369592 CCDC146Q8IYE0 955 aa27.1■■□□□ 1.93
SMNDC1-201ENST00000369592 NRXN2Q9P2S2 1712 aa27.1■■□□□ 1.93
SMNDC1-201ENST00000369592 LAMB4A4D0S4 1761 aa27.09■■□□□ 1.93
SMNDC1-201ENST00000369592 SCN7AQ01118 1682 aa27.09■■□□□ 1.93
SMNDC1-201ENST00000369592 ZPR1O75312 459 aa27.09■■□□□ 1.93
SMNDC1-201ENST00000369592 YBX3P16989 372 aaKnown RBP eCLIP27.09■■□□□ 1.93
SMNDC1-201ENST00000369592 POLRMTO00411 1230 aaKnown RBP27.08■■□□□ 1.93
SMNDC1-201ENST00000369592 EIF4A1P60842 406 aaKnown RBP27.08■■□□□ 1.93
SMNDC1-201ENST00000369592 CCDC184Q52MB2 194 aa27.08■■□□□ 1.93
SMNDC1-201ENST00000369592 AFDNP55196 1824 aaKnown RBP27.08■■□□□ 1.93
SMNDC1-201ENST00000369592 PXDNLA1KZ92 1463 aa27.07■■□□□ 1.92
SMNDC1-201ENST00000369592 A0A087WZG4 1122 aa27.07■■□□□ 1.92
SMNDC1-201ENST00000369592 TRIM35Q9UPQ4 493 aa27.07■■□□□ 1.92
SMNDC1-201ENST00000369592 PARP3Q9Y6F1 533 aa27.07■■□□□ 1.92
SMNDC1-201ENST00000369592 BABAM1Q9NWV8 329 aa27.06■■□□□ 1.92
SMNDC1-201ENST00000369592 BCORQ6W2J9 1755 aa27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 N4BP2Q86UW6 1770 aaPredicted RBP27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 BRCA1P38398 1863 aaKnown RBP27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 NBPF26B4DH59 902 aa27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 LMOD3Q0VAK6 560 aa27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 NFIXQ14938 502 aa27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 NBPF10Q6P3W6 841 aaKnown RBP27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 NBPF15Q8N660 670 aa27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 RRP7AQ9Y3A4 280 aaKnown RBP27.05■■□□□ 1.92
SMNDC1-201ENST00000369592 TGFB2P61812 414 aa27.04■■□□□ 1.92
SMNDC1-201ENST00000369592 CAMTA2O94983 1202 aa27.02■■□□□ 1.92
SMNDC1-201ENST00000369592 TBC1D2BQ9UPU7 963 aa27.01■■□□□ 1.91
SMNDC1-201ENST00000369592 ATP10DQ9P241 1426 aa27■■□□□ 1.91
SMNDC1-201ENST00000369592 PIP4K2AP48426 406 aaPredicted RBP27■■□□□ 1.91
SMNDC1-201ENST00000369592 GRIN3BO60391 1043 aa26.99■■□□□ 1.91
SMNDC1-201ENST00000369592 KCNA3P22001 575 aa26.99■■□□□ 1.91
SMNDC1-201ENST00000369592 CHL1O00533 1208 aa26.98■■□□□ 1.91
SMNDC1-201ENST00000369592 NEUROD2Q15784 382 aa26.98■■□□□ 1.91
SMNDC1-201ENST00000369592 TSPYL4Q9UJ04 414 aa26.98■■□□□ 1.91
SMNDC1-201ENST00000369592 RGL2O15211 777 aa26.97■■□□□ 1.91
SMNDC1-201ENST00000369592 A0A0G2JLW4 131 aa26.96■■□□□ 1.91
SMNDC1-201ENST00000369592 DPEP1P16444 411 aa26.96■■□□□ 1.91
SMNDC1-201ENST00000369592 TBC1D9BQ66K14 1250 aa26.96■■□□□ 1.91
SMNDC1-201ENST00000369592 DZIP3Q86Y13 1208 aaKnown RBP26.96■■□□□ 1.91
SMNDC1-201ENST00000369592 APAF1O14727 1248 aa26.95■■□□□ 1.9
SMNDC1-201ENST00000369592 SERPINB2P05120 415 aa26.95■■□□□ 1.9
SMNDC1-201ENST00000369592 ZNF330Q9Y3S2 320 aaPredicted RBP26.94■■□□□ 1.9
SMNDC1-201ENST00000369592 ANP32CO43423 234 aa26.93■■□□□ 1.9
SMNDC1-201ENST00000369592 CLEC4GQ6UXB4 293 aa26.93■■□□□ 1.9
SMNDC1-201ENST00000369592 ANKRD31Q8N7Z5 1873 aa26.92■■□□□ 1.9
SMNDC1-201ENST00000369592 LRP10Q7Z4F1 713 aa26.92■■□□□ 1.9
SMNDC1-201ENST00000369592 GPBP1L1Q9HC44 474 aaPredicted RBP26.92■■□□□ 1.9
SMNDC1-201ENST00000369592 ARFGEF1Q9Y6D6 1849 aa26.92■■□□□ 1.9
SMNDC1-201ENST00000369592 ERBB4Q15303 1308 aa26.91■■□□□ 1.9
SMNDC1-201ENST00000369592 ZNF853P0CG23 659 aa26.91■■□□□ 1.9
SMNDC1-201ENST00000369592 HSPA6P17066 643 aa26.91■■□□□ 1.9
SMNDC1-201ENST00000369592 DLEC1Q9Y238 1755 aa26.91■■□□□ 1.9
SMNDC1-201ENST00000369592 CARMIL3Q8ND23 1372 aa26.9■■□□□ 1.9
SMNDC1-201ENST00000369592 PDIA6Q15084 440 aa26.89■■□□□ 1.9
SMNDC1-201ENST00000369592 BICDL1Q6ZP65 573 aa26.89■■□□□ 1.9
SMNDC1-201ENST00000369592 NPM2Q86SE8 214 aaKnown RBP26.89■■□□□ 1.9
SMNDC1-201ENST00000369592 CFAP44Q96MT7 982 aa26.89■■□□□ 1.9
SMNDC1-201ENST00000369592 WWC3Q9ULE0 1092 aa26.88■■□□□ 1.89
SMNDC1-201ENST00000369592 NUP98P52948 1817 aa26.88■■□□□ 1.89
SMNDC1-201ENST00000369592 ZNF526Q8TF50 670 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms