RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 FSD2A1L4K1 749 aa12.47□□□□□ -0.41
TPM3-209ENST00000368527 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
TPM3-209ENST00000368527 SPRYD3Q8NCJ5 442 aa12.47□□□□□ -0.41
TPM3-209ENST00000368527 OTUD7AQ8TE49 926 aaPredicted RBP12.47□□□□□ -0.41
TPM3-209ENST00000368527 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
TPM3-209ENST00000368527 EXOC6BQ9Y2D4 811 aa12.47□□□□□ -0.41
TPM3-209ENST00000368527 PNMA6EA0A0J9YXQ4 647 aa12.46□□□□□ -0.41
TPM3-209ENST00000368527 ATF3P18847 181 aa12.46□□□□□ -0.41
TPM3-209ENST00000368527 KSR2Q6VAB6 950 aa12.46□□□□□ -0.41
TPM3-209ENST00000368527 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.41
TPM3-209ENST00000368527 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 APBB1O00213 710 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
TPM3-209ENST00000368527 TATP17735 454 aaPredicted RBP12.45□□□□□ -0.42
TPM3-209ENST00000368527 CHMLP26374 656 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 PPP1R42Q7Z4L9 355 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 CNTROBQ8N137 903 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 LINS1Q8NG48 757 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
TPM3-209ENST00000368527 LGR6Q9HBX8 967 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 DDX21Q9NR30 783 aaKnown RBP eCLIP12.45□□□□□ -0.42
TPM3-209ENST00000368527 CHPF2Q9P2E5 772 aa12.45□□□□□ -0.42
TPM3-209ENST00000368527 UTYO14607 1347 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 ERBB3P21860 1342 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 NPHP3Q7Z494 1330 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 PI4KAP2A4QPH2 592 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 TRIM6-TRIM34B2RNG4 842 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 HIP1O00291 1037 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 SRGAP3O43295 1099 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 SURF6O75683 361 aaKnown RBP12.44□□□□□ -0.42
TPM3-209ENST00000368527 GLRX3O76003 335 aaKnown RBP12.44□□□□□ -0.42
TPM3-209ENST00000368527 EIF2S2P20042 333 aaKnown RBP12.44□□□□□ -0.42
TPM3-209ENST00000368527 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 PI4KAP1Q8N8J0 262 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 ORAI2Q96SN7 254 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 PHAXQ9H814 394 aaKnown RBP12.44□□□□□ -0.42
TPM3-209ENST00000368527 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
TPM3-209ENST00000368527 SIPA1L3O60292 1781 aaPredicted RBP12.43□□□□□ -0.42
TPM3-209ENST00000368527 PDIA4P13667 645 aaKnown RBP12.43□□□□□ -0.42
TPM3-209ENST00000368527 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
TPM3-209ENST00000368527 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
TPM3-209ENST00000368527 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
TPM3-209ENST00000368527 FAM43AQ8N2R8 423 aa12.43□□□□□ -0.42
TPM3-209ENST00000368527 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
TPM3-209ENST00000368527 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
TPM3-209ENST00000368527 C9orf78Q9NZ63 289 aaPredicted RBP12.43□□□□□ -0.42
TPM3-209ENST00000368527 ADCY9O60503 1353 aa12.43□□□□□ -0.42
TPM3-209ENST00000368527 ZBTB7CA1YPR0 619 aa12.42□□□□□ -0.42
TPM3-209ENST00000368527 CYP2E1P05181 493 aaPredicted RBP12.42□□□□□ -0.42
TPM3-209ENST00000368527 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
TPM3-209ENST00000368527 KLHL40Q2TBA0 621 aa12.42□□□□□ -0.42
TPM3-209ENST00000368527 LRRC59Q96AG4 307 aaKnown RBP12.42□□□□□ -0.42
TPM3-209ENST00000368527 CPDO75976 1380 aa12.42□□□□□ -0.42
TPM3-209ENST00000368527 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 MRC1P22897 1456 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 CD2BP2O95400 341 aaKnown RBP12.41□□□□□ -0.42
TPM3-209ENST00000368527 CUL4AQ13619 759 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 KIAA1211Q6ZU35 1233 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 IFNL2Q8IZJ0 200 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 RILPL2Q969X0 211 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
TPM3-209ENST00000368527 COL15A1P39059 1388 aa12.41□□□□□ -0.42
TPM3-209ENST00000368527 PXDNQ92626 1479 aa12.4□□□□□ -0.42
TPM3-209ENST00000368527 TNS3Q68CZ2 1445 aa12.4□□□□□ -0.42
TPM3-209ENST00000368527 BAG4O95429 457 aaKnown RBP12.4□□□□□ -0.42
TPM3-209ENST00000368527 OS9Q13438 667 aaPredicted RBP12.4□□□□□ -0.42
TPM3-209ENST00000368527 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
TPM3-209ENST00000368527 SLC52A2Q9HAB3 445 aa12.4□□□□□ -0.42
TPM3-209ENST00000368527 ANO2Q9NQ90 1003 aa12.4□□□□□ -0.42
TPM3-209ENST00000368527 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
TPM3-209ENST00000368527 GRM8O00222 908 aa12.39□□□□□ -0.43
TPM3-209ENST00000368527 HSPA4P34932 840 aa12.39□□□□□ -0.43
TPM3-209ENST00000368527 NEK4P51957 841 aa12.39□□□□□ -0.43
TPM3-209ENST00000368527 ZNF790Q6PG37 636 aa12.39□□□□□ -0.43
TPM3-209ENST00000368527 PI4K2BQ8TCG2 481 aa12.39□□□□□ -0.43
TPM3-209ENST00000368527 ECHDC1Q9NTX5 307 aa12.39□□□□□ -0.43
TPM3-209ENST00000368527 RAD50Q92878 1312 aa12.38□□□□□ -0.43
TPM3-209ENST00000368527 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
TPM3-209ENST00000368527 CRYBG1Q9Y4K1 1723 aa12.38□□□□□ -0.43
TPM3-209ENST00000368527 SGSM2O43147 1006 aa12.38□□□□□ -0.43
TPM3-209ENST00000368527 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
TPM3-209ENST00000368527 PHKG2P15735 406 aa12.38□□□□□ -0.43
TPM3-209ENST00000368527 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
TPM3-209ENST00000368527 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
TPM3-209ENST00000368527 SCN11AQ9UI33 1791 aa12.38□□□□□ -0.43
TPM3-209ENST00000368527 MBD3O95983 291 aa12.37□□□□□ -0.43
TPM3-209ENST00000368527 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
TPM3-209ENST00000368527 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
TPM3-209ENST00000368527 SSFA2P28290 1259 aa12.37□□□□□ -0.43
TPM3-209ENST00000368527 G3BP1Q13283 466 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■■■□□ 15.3
TPM3-209ENST00000368527 TTC5Q8N0Z6 440 aa12.37□□□□□ -0.43
TPM3-209ENST00000368527 EVI5LQ96CN4 794 aa12.37□□□□□ -0.43
TPM3-209ENST00000368527 FMNL2Q96PY5 1086 aa12.37□□□□□ -0.43
TPM3-209ENST00000368527 GRPEL1Q9HAV7 217 aa12.37□□□□□ -0.43
TPM3-209ENST00000368527 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms