RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 ZNF827Q17R98 1081 aa20.27■□□□□ 0.84
FDPS-202ENST00000368356 AKT1S1Q96B36 256 aa20.27■□□□□ 0.84
FDPS-202ENST00000368356 ZNF496Q96IT1 587 aaPredicted RBP20.27■□□□□ 0.84
FDPS-202ENST00000368356 FMNL2Q96PY5 1086 aa20.27■□□□□ 0.83
FDPS-202ENST00000368356 GIGYF1O75420 1035 aaPredicted RBP20.26■□□□□ 0.83
FDPS-202ENST00000368356 CICQ96RK0 1608 aaPredicted RBP20.25■□□□□ 0.83
FDPS-202ENST00000368356 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
FDPS-202ENST00000368356 RARSP54136 660 aaKnown RBP20.25■□□□□ 0.83
FDPS-202ENST00000368356 ATP6V1AP38606 617 aa20.24■□□□□ 0.83
FDPS-202ENST00000368356 ALDH1L2Q3SY69 923 aa20.24■□□□□ 0.83
FDPS-202ENST00000368356 CHMP4AQ9BY43 222 aa20.24■□□□□ 0.83
FDPS-202ENST00000368356 COL5A3P25940 1745 aaPredicted RBP20.24■□□□□ 0.83
FDPS-202ENST00000368356 SNRPA1P09661 255 aaKnown RBP20.23■□□□□ 0.83
FDPS-202ENST00000368356 VSIG10Q8N0Z9 540 aa20.23■□□□□ 0.83
FDPS-202ENST00000368356 RBM42Q9BTD8 480 aaKnown RBP20.23■□□□□ 0.83
FDPS-202ENST00000368356 TFCP2L1Q9NZI6 479 aa20.23■□□□□ 0.83
FDPS-202ENST00000368356 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
FDPS-202ENST00000368356 BRPF1P55201 1214 aaPredicted RBP20.21■□□□□ 0.83
FDPS-202ENST00000368356 RNF123Q5XPI4 1314 aa20.21■□□□□ 0.83
FDPS-202ENST00000368356 TJP1Q07157 1748 aa20.2■□□□□ 0.82
FDPS-202ENST00000368356 PTCD1O75127 700 aaKnown RBP20.2■□□□□ 0.82
FDPS-202ENST00000368356 SSH1Q8WYL5 1049 aa20.2■□□□□ 0.82
FDPS-202ENST00000368356 AK7Q96M32 723 aa20.2■□□□□ 0.82
FDPS-202ENST00000368356 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
FDPS-202ENST00000368356 ITPK1Q13572 414 aa20.19■□□□□ 0.82
FDPS-202ENST00000368356 CCDC30Q5VVM6 783 aa20.19■□□□□ 0.82
FDPS-202ENST00000368356 LINC00116Q8NCU8 138 aa20.19■□□□□ 0.82
FDPS-202ENST00000368356 SPON1Q9HCB6 807 aa20.19■□□□□ 0.82
FDPS-202ENST00000368356 PRAMEF22A3QJZ6 481 aa20.19■□□□□ 0.82
FDPS-202ENST00000368356 BCAR3O75815 825 aa20.19■□□□□ 0.82
FDPS-202ENST00000368356 HDGFL1Q5TGJ6 251 aa20.19■□□□□ 0.82
FDPS-202ENST00000368356 SLC4A9Q96Q91 983 aa20.19■□□□□ 0.82
FDPS-202ENST00000368356 TEX13AQ9BXU3 409 aaPredicted RBP20.19■□□□□ 0.82
FDPS-202ENST00000368356 PDGFDQ9GZP0 370 aaPredicted RBP20.19■□□□□ 0.82
FDPS-202ENST00000368356 SUPT16HQ9Y5B9 1047 aaKnown RBP20.19■□□□□ 0.82
FDPS-202ENST00000368356 FLAD1Q8NFF5 587 aa20.18■□□□□ 0.82
FDPS-202ENST00000368356 USP16Q9Y5T5 823 aa20.18■□□□□ 0.82
FDPS-202ENST00000368356 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
FDPS-202ENST00000368356 SLC16A10Q8TF71 515 aa20.17■□□□□ 0.82
FDPS-202ENST00000368356 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
FDPS-202ENST00000368356 SMC4Q9NTJ3 1288 aa20.17■□□□□ 0.82
FDPS-202ENST00000368356 SRCAPQ6ZRS2 3230 aa20.16■□□□□ 0.82
FDPS-202ENST00000368356 ZBTB7AO95365 584 aa20.16■□□□□ 0.82
FDPS-202ENST00000368356 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
FDPS-202ENST00000368356 BCL2L13Q9BXK5 485 aa20.16■□□□□ 0.82
FDPS-202ENST00000368356 CNTNAP4Q9C0A0 1308 aa20.16■□□□□ 0.82
FDPS-202ENST00000368356 STK31Q9BXU1 1019 aa20.15■□□□□ 0.82
FDPS-202ENST00000368356 SSFA2P28290 1259 aa20.14■□□□□ 0.81
FDPS-202ENST00000368356 DBF4Q9UBU7 674 aaPredicted RBP20.14■□□□□ 0.81
FDPS-202ENST00000368356 ERBB4Q15303 1308 aa20.14■□□□□ 0.81
FDPS-202ENST00000368356 COL24A1Q17RW2 1714 aa20.14■□□□□ 0.81
FDPS-202ENST00000368356 MYH14Q7Z406 1995 aaKnown RBP20.14■□□□□ 0.81
FDPS-202ENST00000368356 TCERG1O14776 1098 aaKnown RBP20.13■□□□□ 0.81
FDPS-202ENST00000368356 GNPATO15228 680 aa20.13■□□□□ 0.81
FDPS-202ENST00000368356 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
FDPS-202ENST00000368356 RC3H1Q5TC82 1133 aaKnown RBP20.13■□□□□ 0.81
FDPS-202ENST00000368356 DNAJC10Q8IXB1 793 aa20.13■□□□□ 0.81
FDPS-202ENST00000368356 KIF16BQ96L93 1317 aa20.13■□□□□ 0.81
FDPS-202ENST00000368356 RRP1P56182 461 aaKnown RBP20.12■□□□□ 0.81
FDPS-202ENST00000368356 COL23A1Q86Y22 540 aaPredicted RBP20.12■□□□□ 0.81
FDPS-202ENST00000368356 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.12■□□□□ 0.81
FDPS-202ENST00000368356 NECTIN2Q92692 538 aa20.12■□□□□ 0.81
FDPS-202ENST00000368356 MSH5O43196 834 aa20.11■□□□□ 0.81
FDPS-202ENST00000368356 STARD3NLO95772 234 aa20.11■□□□□ 0.81
FDPS-202ENST00000368356 PDIA6Q15084 440 aa20.11■□□□□ 0.81
FDPS-202ENST00000368356 DDX21Q9NR30 783 aaKnown RBP eCLIP20.11■□□□□ 0.81
FDPS-202ENST00000368356 CHPF2Q9P2E5 772 aa20.11■□□□□ 0.81
FDPS-202ENST00000368356 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
FDPS-202ENST00000368356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.1■□□□□ 0.81
FDPS-202ENST00000368356 PHF14O94880 888 aa20.1■□□□□ 0.81
FDPS-202ENST00000368356 CYP19A1P11511 503 aaPredicted RBP20.1■□□□□ 0.81
FDPS-202ENST00000368356 ARHGAP45Q92619 1136 aa20.1■□□□□ 0.81
FDPS-202ENST00000368356 ATF5Q9Y2D1 282 aaPredicted RBP20.1■□□□□ 0.81
FDPS-202ENST00000368356 CRKLP46109 303 aaKnown RBP20.1■□□□□ 0.81
FDPS-202ENST00000368356 PPP1R1BQ9UD71 204 aaPredicted RBP20.1■□□□□ 0.81
FDPS-202ENST00000368356 IPO8O15397 1037 aaKnown RBP20.09■□□□□ 0.81
FDPS-202ENST00000368356 ADRA2BP18089 450 aa20.09■□□□□ 0.81
FDPS-202ENST00000368356 HYPKQ9NX55 129 aa20.09■□□□□ 0.81
FDPS-202ENST00000368356 NOB1Q9ULX3 412 aaKnown RBP20.09■□□□□ 0.81
FDPS-202ENST00000368356 C4AP0C0L4 1744 aa20.08■□□□□ 0.81
FDPS-202ENST00000368356 RPS6KA4O75676 772 aa20.08■□□□□ 0.8
FDPS-202ENST00000368356 PTPRCP08575 1304 aa20.08■□□□□ 0.8
FDPS-202ENST00000368356 PTGER2P43116 358 aa20.08■□□□□ 0.8
FDPS-202ENST00000368356 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.8
FDPS-202ENST00000368356 LRP10Q7Z4F1 713 aa20.08■□□□□ 0.8
FDPS-202ENST00000368356 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.8
FDPS-202ENST00000368356 FRAT1Q92837 279 aaPredicted RBP20.08■□□□□ 0.8
FDPS-202ENST00000368356 NBPF26B4DH59 902 aa20.07■□□□□ 0.8
FDPS-202ENST00000368356 PLIN1O60240 522 aa20.07■□□□□ 0.8
FDPS-202ENST00000368356 A1BGP04217 495 aa20.07■□□□□ 0.8
FDPS-202ENST00000368356 POLD1P28340 1107 aa20.07■□□□□ 0.8
FDPS-202ENST00000368356 PROSER3Q2NL68 480 aa20.07■□□□□ 0.8
FDPS-202ENST00000368356 NBPF10Q6P3W6 841 aaKnown RBP20.07■□□□□ 0.8
FDPS-202ENST00000368356 G2E3Q7L622 706 aa20.07■□□□□ 0.8
FDPS-202ENST00000368356 NBPF15Q8N660 670 aa20.07■□□□□ 0.8
FDPS-202ENST00000368356 SGIP1Q9BQI5 828 aa20.07■□□□□ 0.8
FDPS-202ENST00000368356 FLIIQ13045 1269 aa20.06■□□□□ 0.8
FDPS-202ENST00000368356 ATF7IPQ6VMQ6 1270 aa20.06■□□□□ 0.8
FDPS-202ENST00000368356 PHAXQ9H814 394 aaKnown RBP20.06■□□□□ 0.8
FDPS-202ENST00000368356 CCDC87Q9NVE4 849 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms