RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 SSH3Q8TE77 659 aa21.59■■□□□ 1.05
LMNA-205ENST00000368299 DDX21Q9NR30 783 aaKnown RBP eCLIP21.59■■□□□ 1.05
LMNA-205ENST00000368299 ALDH1L1O75891 902 aa21.59■■□□□ 1.05
LMNA-205ENST00000368299 NFATC2IPQ8NCF5 419 aa21.59■■□□□ 1.05
LMNA-205ENST00000368299 OTUD7AQ8TE49 926 aaPredicted RBP21.59■■□□□ 1.05
LMNA-205ENST00000368299 HDAC5Q9UQL6 1122 aa21.59■■□□□ 1.05
LMNA-205ENST00000368299 EXOC6BQ9Y2D4 811 aa21.59■■□□□ 1.05
LMNA-205ENST00000368299 CYP27B1O15528 508 aa21.58■■□□□ 1.05
LMNA-205ENST00000368299 DDX58O95786 925 aaKnown RBP21.58■■□□□ 1.05
LMNA-205ENST00000368299 ANXA1P04083 346 aa21.58■■□□□ 1.04
LMNA-205ENST00000368299 CASC1Q6TDU7 716 aa21.58■■□□□ 1.04
LMNA-205ENST00000368299 PDE1AP54750 535 aa21.56■■□□□ 1.04
LMNA-205ENST00000368299 POLA2Q14181 598 aa21.56■■□□□ 1.04
LMNA-205ENST00000368299 MAP3K2Q9Y2U5 619 aa21.56■■□□□ 1.04
LMNA-205ENST00000368299 RAB11FIP3O75154 756 aa21.55■■□□□ 1.04
LMNA-205ENST00000368299 PROSER3Q2NL68 480 aa21.55■■□□□ 1.04
LMNA-205ENST00000368299 TTC5Q8N0Z6 440 aa21.55■■□□□ 1.04
LMNA-205ENST00000368299 COL5A2P05997 1499 aaPredicted RBP21.55■■□□□ 1.04
LMNA-205ENST00000368299 PRAMEF22A3QJZ6 481 aa21.55■■□□□ 1.04
LMNA-205ENST00000368299 SDSP20132 328 aa21.55■■□□□ 1.04
LMNA-205ENST00000368299 SLC39A6Q13433 755 aa21.55■■□□□ 1.04
LMNA-205ENST00000368299 TOM1L2Q6ZVM7 507 aa21.55■■□□□ 1.04
LMNA-205ENST00000368299 PARP4Q9UKK3 1724 aaKnown RBP21.55■■□□□ 1.04
LMNA-205ENST00000368299 NBPF7P0C2Y1 421 aaPredicted RBP21.54■■□□□ 1.04
LMNA-205ENST00000368299 PPP1R42Q7Z4L9 355 aa21.54■■□□□ 1.04
LMNA-205ENST00000368299 SALL3Q9BXA9 1300 aa21.54■■□□□ 1.04
LMNA-205ENST00000368299 PCDH11XQ9BZA7 1347 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 PCDH11YQ9BZA8 1340 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 NHSL1Q5SYE7 1610 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 SNRPA1P09661 255 aaKnown RBP21.53■■□□□ 1.04
LMNA-205ENST00000368299 CABP4P57796 275 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 PDIA6Q15084 440 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 HSCBQ8IWL3 235 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 LINS1Q8NG48 757 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 SNX21Q969T3 373 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
LMNA-205ENST00000368299 ABCA3Q99758 1704 aa21.52■■□□□ 1.04
LMNA-205ENST00000368299 HSP90AB4PQ58FF6 505 aa21.52■■□□□ 1.04
LMNA-205ENST00000368299 SRGAP3O43295 1099 aa21.52■■□□□ 1.03
LMNA-205ENST00000368299 MX1P20591 662 aa21.52■■□□□ 1.03
LMNA-205ENST00000368299 MTX1Q13505 466 aa21.52■■□□□ 1.03
LMNA-205ENST00000368299 ZCRB1Q8TBF4 217 aaKnown RBP21.52■■□□□ 1.03
LMNA-205ENST00000368299 ZNF496Q96IT1 587 aaPredicted RBP21.52■■□□□ 1.03
LMNA-205ENST00000368299 CARD10Q9BWT7 1032 aa21.52■■□□□ 1.03
LMNA-205ENST00000368299 GSE1Q14687 1217 aa21.51■■□□□ 1.03
LMNA-205ENST00000368299 C9orf78Q9NZ63 289 aaPredicted RBP21.51■■□□□ 1.03
LMNA-205ENST00000368299 AOX1Q06278 1338 aa21.51■■□□□ 1.03
LMNA-205ENST00000368299 STAP2Q9UGK3 403 aa21.5■■□□□ 1.03
LMNA-205ENST00000368299 C5P01031 1676 aa21.5■■□□□ 1.03
LMNA-205ENST00000368299 SURF6O75683 361 aaKnown RBP21.49■■□□□ 1.03
LMNA-205ENST00000368299 ANTXR1Q9H6X2 564 aa21.49■■□□□ 1.03
LMNA-205ENST00000368299 LARP1Q6PKG0 1096 aaKnown RBP21.49■■□□□ 1.03
LMNA-205ENST00000368299 IL2RBP14784 551 aa21.48■■□□□ 1.03
LMNA-205ENST00000368299 KIF1BPQ96EK5 621 aa21.48■■□□□ 1.03
LMNA-205ENST00000368299 SLKQ9H2G2 1235 aaPredicted RBP21.48■■□□□ 1.03
LMNA-205ENST00000368299 UTYO14607 1347 aa21.48■■□□□ 1.03
LMNA-205ENST00000368299 ERVV-2B6SEH9 535 aa21.48■■□□□ 1.03
LMNA-205ENST00000368299 KIF2CQ99661 725 aa21.48■■□□□ 1.03
LMNA-205ENST00000368299 REC8O95072 547 aa21.47■■□□□ 1.03
LMNA-205ENST00000368299 RIC3Q7Z5B4 369 aa21.47■■□□□ 1.03
LMNA-205ENST00000368299 NEXNQ0ZGT2 675 aa21.46■■□□□ 1.03
LMNA-205ENST00000368299 AIMP1Q12904 312 aaKnown RBP21.46■■□□□ 1.03
LMNA-205ENST00000368299 NKX1-1Q15270 411 aaPredicted RBP21.46■■□□□ 1.03
LMNA-205ENST00000368299 GRM8O00222 908 aa21.46■■□□□ 1.03
LMNA-205ENST00000368299 RHPN1Q8TCX5 695 aa21.46■■□□□ 1.03
LMNA-205ENST00000368299 EVA1CP58658 441 aa21.45■■□□□ 1.02
LMNA-205ENST00000368299 CWF19L2Q2TBE0 894 aaKnown RBP21.45■■□□□ 1.02
LMNA-205ENST00000368299 USP26Q9BXU7 913 aa21.45■■□□□ 1.02
LMNA-205ENST00000368299 MYL6BP14649 208 aa21.44■■□□□ 1.02
LMNA-205ENST00000368299 XAGE3Q8WTP9 111 aa21.44■■□□□ 1.02
LMNA-205ENST00000368299 USP16Q9Y5T5 823 aa21.44■■□□□ 1.02
LMNA-205ENST00000368299 ERBB4Q15303 1308 aa21.44■■□□□ 1.02
LMNA-205ENST00000368299 ERC2O15083 957 aa21.44■■□□□ 1.02
LMNA-205ENST00000368299 COPS6Q7L5N1 327 aa21.43■■□□□ 1.02
LMNA-205ENST00000368299 FRAT2O75474 233 aaPredicted RBP21.43■■□□□ 1.02
LMNA-205ENST00000368299 METTL22Q9BUU2 404 aaPredicted RBP21.43■■□□□ 1.02
LMNA-205ENST00000368299 ANKRD13DQ6ZTN6 518 aa21.42■■□□□ 1.02
LMNA-205ENST00000368299 LRP10Q7Z4F1 713 aa21.42■■□□□ 1.02
LMNA-205ENST00000368299 ERC1Q8IUD2 1116 aa21.42■■□□□ 1.02
LMNA-205ENST00000368299 IL1RAPL2Q9NP60 686 aa21.42■■□□□ 1.02
LMNA-205ENST00000368299 STRN4Q9NRL3 753 aa21.42■■□□□ 1.02
LMNA-205ENST00000368299 LAMB4A4D0S4 1761 aa21.41■■□□□ 1.02
LMNA-205ENST00000368299 TUBGCP6Q96RT7 1819 aa21.41■■□□□ 1.02
LMNA-205ENST00000368299 IGKV5-2P06315 115 aa21.41■■□□□ 1.02
LMNA-205ENST00000368299 RABEP1Q15276 862 aa21.41■■□□□ 1.02
LMNA-205ENST00000368299 NEURL1BA8MQ27 555 aa21.4■■□□□ 1.02
LMNA-205ENST00000368299 TSHZ3Q63HK5 1081 aa21.4■■□□□ 1.02
LMNA-205ENST00000368299 GLI3P10071 1580 aa21.4■■□□□ 1.02
LMNA-205ENST00000368299 OS9Q13438 667 aaPredicted RBP21.39■■□□□ 1.02
LMNA-205ENST00000368299 CHMP5Q9NZZ3 219 aa21.39■■□□□ 1.02
LMNA-205ENST00000368299 TRIM6-TRIM34B2RNG4 842 aa21.39■■□□□ 1.01
LMNA-205ENST00000368299 GCKRQ14397 625 aa21.39■■□□□ 1.01
LMNA-205ENST00000368299 IL27Q8NEV9 243 aa21.38■■□□□ 1.01
LMNA-205ENST00000368299 SUCLG2Q96I99 432 aa21.38■■□□□ 1.01
LMNA-205ENST00000368299 NUTM1Q86Y26 1132 aa21.38■■□□□ 1.01
LMNA-205ENST00000368299 CLASRPQ8N2M8 674 aaKnown RBP21.38■■□□□ 1.01
LMNA-205ENST00000368299 MYD88Q99836 296 aa21.38■■□□□ 1.01
LMNA-205ENST00000368299 USP42Q9H9J4 1324 aaKnown RBP21.37■■□□□ 1.01
LMNA-205ENST00000368299 K7ELQ4 463 aaPredicted RBP21.37■■□□□ 1.01
LMNA-205ENST00000368299 RILPL2Q969X0 211 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms