RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 FAM196AQ6ZSG2 479 aa9.39□□□□□ -0.91
ECHDC1-202ENST00000368289 TNS4Q8IZW8 715 aa9.39□□□□□ -0.91
ECHDC1-202ENST00000368289 KANK1Q14678 1352 aa9.38□□□□□ -0.91
ECHDC1-202ENST00000368289 NR1I2O75469 434 aa9.38□□□□□ -0.91
ECHDC1-202ENST00000368289 PTF1AQ7RTS3 328 aa9.38□□□□□ -0.91
ECHDC1-202ENST00000368289 NDUFV2P19404 249 aa9.37□□□□□ -0.91
ECHDC1-202ENST00000368289 Q3C1V9 767 aa9.37□□□□□ -0.91
ECHDC1-202ENST00000368289 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
ECHDC1-202ENST00000368289 BTG4Q9NY30 223 aa9.37□□□□□ -0.91
ECHDC1-202ENST00000368289 ABCC5O15440 1437 aa9.37□□□□□ -0.91
ECHDC1-202ENST00000368289 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
ECHDC1-202ENST00000368289 MORN1Q5T089 497 aa9.36□□□□□ -0.91
ECHDC1-202ENST00000368289 MAP3K5Q99683 1374 aa9.36□□□□□ -0.91
ECHDC1-202ENST00000368289 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
ECHDC1-202ENST00000368289 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
ECHDC1-202ENST00000368289 CENPBP07199 599 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-202ENST00000368289 GPR162Q16538 588 aa9.35□□□□□ -0.91
ECHDC1-202ENST00000368289 PUS10Q3MIT2 529 aaKnown RBP9.35□□□□□ -0.91
ECHDC1-202ENST00000368289 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.35□□□□□ -0.91
ECHDC1-202ENST00000368289 LIMD1Q9UGP4 676 aa9.35□□□□□ -0.91
ECHDC1-202ENST00000368289 YBX3P16989 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
ECHDC1-202ENST00000368289 DIEXFQ68CQ4 756 aaKnown RBP9.34□□□□□ -0.91
ECHDC1-202ENST00000368289 PROCA1Q8NCQ7 364 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-202ENST00000368289 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
ECHDC1-202ENST00000368289 SALL2Q9Y467 1007 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-202ENST00000368289 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
ECHDC1-202ENST00000368289 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
ECHDC1-202ENST00000368289 JMYQ8N9B5 988 aa9.33□□□□□ -0.92
ECHDC1-202ENST00000368289 SLC27A5Q9Y2P5 690 aa9.33□□□□□ -0.92
ECHDC1-202ENST00000368289 ABCA3Q99758 1704 aa9.33□□□□□ -0.92
ECHDC1-202ENST00000368289 CROCC2H7BZ55 1655 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 SPATA31A1Q5TZJ5 1347 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 RRBP1Q9P2E9 1410 aaKnown RBP9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 HTRA3P83110 453 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 MMRN1Q13201 1228 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 MTMR2Q13614 643 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 CSPP1Q1MSJ5 1256 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 PPP2R2DQ66LE6 453 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 SCUBE3Q8IX30 993 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 ARXQ96QS3 562 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 ADCY9O60503 1353 aa9.32□□□□□ -0.92
ECHDC1-202ENST00000368289 PRAG1Q86YV5 1406 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 LILRB3O75022 631 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 FMNL1O95466 1100 aaPredicted RBP9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 GUCA2AQ02747 115 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 BLOC1S3Q6QNY0 202 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 NLGN2Q8NFZ4 835 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 PCDHB15Q9Y5E8 787 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
ECHDC1-202ENST00000368289 TNRC18O15417 2968 aaPredicted RBP9.3□□□□□ -0.92
ECHDC1-202ENST00000368289 COPS2P61201 443 aa9.3□□□□□ -0.92
ECHDC1-202ENST00000368289 HLA-CQ95604 372 aa9.3□□□□□ -0.92
ECHDC1-202ENST00000368289 PCDHGC3Q9UN70 934 aa9.3□□□□□ -0.92
ECHDC1-202ENST00000368289 PLSCR1O15162 318 aa9.29□□□□□ -0.92
ECHDC1-202ENST00000368289 TMEM259Q4ZIN3 620 aa9.29□□□□□ -0.92
ECHDC1-202ENST00000368289 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-202ENST00000368289 MTRQ99707 1265 aa9.29□□□□□ -0.92
ECHDC1-202ENST00000368289 MTFR1LQ9H019 292 aa9.29□□□□□ -0.92
ECHDC1-202ENST00000368289 MYOM3Q5VTT5 1437 aa9.29□□□□□ -0.92
ECHDC1-202ENST00000368289 CDC42BPGQ6DT37 1551 aa9.29□□□□□ -0.92
ECHDC1-202ENST00000368289 LRPPRCP42704 1394 aaKnown RBP9.28□□□□□ -0.92
ECHDC1-202ENST00000368289 ZPR1O75312 459 aa9.28□□□□□ -0.92
ECHDC1-202ENST00000368289 BRICD5Q6PL45 260 aa9.28□□□□□ -0.92
ECHDC1-202ENST00000368289 RETREG3Q86VR2 466 aa9.28□□□□□ -0.92
ECHDC1-202ENST00000368289 TECPR2O15040 1411 aa9.28□□□□□ -0.92
ECHDC1-202ENST00000368289 SLC15A2Q16348 729 aa9.27□□□□□ -0.93
ECHDC1-202ENST00000368289 USB1Q9BQ65 265 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-202ENST00000368289 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
ECHDC1-202ENST00000368289 WWC3Q9ULE0 1092 aa9.27□□□□□ -0.93
ECHDC1-202ENST00000368289 CCDC144AA2RUR9 1427 aa9.27□□□□□ -0.93
ECHDC1-202ENST00000368289 NAIPQ13075 1403 aa9.27□□□□□ -0.93
ECHDC1-202ENST00000368289 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-202ENST00000368289 TNS2Q63HR2 1409 aa9.26□□□□□ -0.93
ECHDC1-202ENST00000368289 RFC5P40937 340 aa9.26□□□□□ -0.93
ECHDC1-202ENST00000368289 QPCTQ16769 361 aa9.26□□□□□ -0.93
ECHDC1-202ENST00000368289 TJAP1Q5JTD0 557 aa9.26□□□□□ -0.93
ECHDC1-202ENST00000368289 ERICH6Q7L0X2 663 aa9.26□□□□□ -0.93
ECHDC1-202ENST00000368289 KLRG1Q96E93 195 aa9.26□□□□□ -0.93
ECHDC1-202ENST00000368289 SPSB2Q99619 263 aa9.26□□□□□ -0.93
ECHDC1-202ENST00000368289 SBNO1A3KN83 1393 aa9.25□□□□□ -0.93
ECHDC1-202ENST00000368289 HFM1A2PYH4 1435 aa9.25□□□□□ -0.93
ECHDC1-202ENST00000368289 KCNC4Q03721 635 aa9.25□□□□□ -0.93
ECHDC1-202ENST00000368289 HELBQ8NG08 1087 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-202ENST00000368289 E9PCH4 1651 aa9.24□□□□□ -0.93
ECHDC1-202ENST00000368289 RTL5Q5HYW3 569 aaPredicted RBP9.24□□□□□ -0.93
ECHDC1-202ENST00000368289 WAPLQ7Z5K2 1190 aa9.24□□□□□ -0.93
ECHDC1-202ENST00000368289 BANK1Q8NDB2 785 aa9.24□□□□□ -0.93
ECHDC1-202ENST00000368289 THAP11Q96EK4 314 aa9.24□□□□□ -0.93
ECHDC1-202ENST00000368289 PEAK1Q9H792 1746 aa9.24□□□□□ -0.93
ECHDC1-202ENST00000368289 COL14A1Q05707 1796 aaKnown RBP9.24□□□□□ -0.93
ECHDC1-202ENST00000368289 PLEKHH1Q9ULM0 1364 aa9.24□□□□□ -0.93
ECHDC1-202ENST00000368289 IQGAP3Q86VI3 1631 aa9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 DAPK1P53355 1430 aa9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 ADH1BP00325 375 aa9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 FLIIQ13045 1269 aa9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms