RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 RRP9O43818 475 aaKnown RBP13.8□□□□□ -0.2
COPA-202ENST00000368069 XBP1P17861 261 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 CCDC47Q96A33 483 aaKnown RBP13.8□□□□□ -0.2
COPA-202ENST00000368069 TTC21AQ8NDW8 1320 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 TNNT3P45378 269 aaPredicted RBP13.8□□□□□ -0.2
COPA-202ENST00000368069 GPS2Q13227 327 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 JMYQ8N9B5 988 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 EVI5LQ96CN4 794 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 ARGLU1Q9NWB6 273 aaPredicted RBP13.8□□□□□ -0.2
COPA-202ENST00000368069 ATP10AO60312 1499 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 ATP8B2P98198 1209 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
COPA-202ENST00000368069 GJB2P29033 226 aa13.79□□□□□ -0.2
COPA-202ENST00000368069 CTNNA3Q9UI47 895 aa13.79□□□□□ -0.2
COPA-202ENST00000368069 SCAND2PQ9GZW5 306 aaPredicted RBP13.79□□□□□ -0.2
COPA-202ENST00000368069 CEP57L1Q8IYX8 460 aa13.79□□□□□ -0.2
COPA-202ENST00000368069 RBM25P49756 843 aaKnown RBP13.78□□□□□ -0.2
COPA-202ENST00000368069 CHPF2Q9P2E5 772 aa13.78□□□□□ -0.2
COPA-202ENST00000368069 TRMT2AQ8IZ69 625 aaKnown RBP13.78□□□□□ -0.2
COPA-202ENST00000368069 FILIP1Q7Z7B0 1213 aa13.78□□□□□ -0.2
COPA-202ENST00000368069 IL13P35225 146 aa13.78□□□□□ -0.2
COPA-202ENST00000368069 STK11IPQ8N1F8 1099 aa13.78□□□□□ -0.2
COPA-202ENST00000368069 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
COPA-202ENST00000368069 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
COPA-202ENST00000368069 SERPINC1P01008 464 aa13.77□□□□□ -0.21
COPA-202ENST00000368069 MSH6P52701 1360 aa13.77□□□□□ -0.21
COPA-202ENST00000368069 MYO5CQ9NQX4 1742 aa13.77□□□□□ -0.21
COPA-202ENST00000368069 ANAPC15P60006 121 aa13.77□□□□□ -0.21
COPA-202ENST00000368069 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
COPA-202ENST00000368069 ZGPATQ8N5A5 531 aaKnown RBP13.77□□□□□ -0.21
COPA-202ENST00000368069 PTCD1O75127 700 aaKnown RBP13.76□□□□□ -0.21
COPA-202ENST00000368069 ZSCAN25Q6NSZ9 544 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 USP26Q9BXU7 913 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 RAD21O60216 631 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 CLCN1P35523 988 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 TEX35Q5T0J7 233 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 OTUD7AQ8TE49 926 aaPredicted RBP13.76□□□□□ -0.21
COPA-202ENST00000368069 U3KPZ7 1027 aaPredicted RBP13.76□□□□□ -0.21
COPA-202ENST00000368069 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 ERVK-7P63135 1459 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 FLT4P35916 1363 aa13.76□□□□□ -0.21
COPA-202ENST00000368069 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
COPA-202ENST00000368069 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
COPA-202ENST00000368069 KDM5DQ9BY66 1539 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
COPA-202ENST00000368069 CCDC70Q6NSX1 233 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 SYNMO15061 1565 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 A0A087WZG4 1122 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 IFIT1P09914 478 aaKnown RBP13.75□□□□□ -0.21
COPA-202ENST00000368069 TFIP11Q9UBB9 837 aaKnown RBP13.75□□□□□ -0.21
COPA-202ENST00000368069 SBNO2Q9Y2G9 1366 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 CCDC69A6NI79 296 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 UBE2HP62256 183 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
COPA-202ENST00000368069 BCORL1Q5H9F3 1711 aa13.74□□□□□ -0.21
COPA-202ENST00000368069 IDH1O75874 414 aaKnown RBP13.74□□□□□ -0.21
COPA-202ENST00000368069 ZSCAN22P10073 491 aaPredicted RBP13.74□□□□□ -0.21
COPA-202ENST00000368069 PRDM15P57071 1507 aaPredicted RBP13.74□□□□□ -0.21
COPA-202ENST00000368069 CCP110O43303 1012 aa13.74□□□□□ -0.21
COPA-202ENST00000368069 CDKL5O76039 1030 aa13.74□□□□□ -0.21
COPA-202ENST00000368069 EYA1Q99502 592 aa13.74□□□□□ -0.21
COPA-202ENST00000368069 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
COPA-202ENST00000368069 ADCY5O95622 1261 aa13.74□□□□□ -0.21
COPA-202ENST00000368069 GUCY1B3Q02153 619 aa13.74□□□□□ -0.21
COPA-202ENST00000368069 G2E3Q7L622 706 aa13.74□□□□□ -0.21
COPA-202ENST00000368069 TTC37Q6PGP7 1564 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
COPA-202ENST00000368069 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 NUP133Q8WUM0 1156 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 MPHOSPH8Q99549 860 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 CNPY2Q9Y2B0 182 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 ANKRD24Q8TF21 1146 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
COPA-202ENST00000368069 PLXNC1O60486 1568 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 JARID2Q92833 1246 aaPredicted RBP13.73□□□□□ -0.21
COPA-202ENST00000368069 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
COPA-202ENST00000368069 ATP5J2-PTCD1G3V325 749 aa13.72□□□□□ -0.21
COPA-202ENST00000368069 METTL24Q5JXM2 366 aa13.72□□□□□ -0.21
COPA-202ENST00000368069 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
COPA-202ENST00000368069 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
COPA-202ENST00000368069 TRPM2O94759 1503 aa13.72□□□□□ -0.21
COPA-202ENST00000368069 HMGB1P09429 215 aaKnown RBP13.72□□□□□ -0.21
COPA-202ENST00000368069 TCEANC2Q96MN5 208 aa13.72□□□□□ -0.21
COPA-202ENST00000368069 CHMLP26374 656 aa13.72□□□□□ -0.21
COPA-202ENST00000368069 MCM5P33992 734 aa13.72□□□□□ -0.21
COPA-202ENST00000368069 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
COPA-202ENST00000368069 FILIP1LQ4L180 1135 aa13.72□□□□□ -0.21
COPA-202ENST00000368069 DDX19AQ9NUU7 478 aaKnown RBP13.72□□□□□ -0.21
COPA-202ENST00000368069 PREX2Q70Z35 1606 aa13.71□□□□□ -0.21
COPA-202ENST00000368069 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
COPA-202ENST00000368069 AKAP2Q9Y2D5 859 aa13.71□□□□□ -0.21
COPA-202ENST00000368069 TDO2P48775 406 aa13.71□□□□□ -0.21
COPA-202ENST00000368069 DHX8Q14562 1220 aaKnown RBP13.71□□□□□ -0.21
COPA-202ENST00000368069 UGGT1Q9NYU2 1555 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms