RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 CD2APQ9Y5K6 639 aa31.55■■■□□ 2.64
PFDN2-201ENST00000368010 CANXP27824 592 aaKnown RBP31.54■■■□□ 2.64
PFDN2-201ENST00000368010 RIPK4P57078 832 aa31.54■■■□□ 2.64
PFDN2-201ENST00000368010 CCDC146Q8IYE0 955 aa31.54■■■□□ 2.64
PFDN2-201ENST00000368010 NLGN2Q8NFZ4 835 aa31.54■■■□□ 2.64
PFDN2-201ENST00000368010 PNISRQ8TF01 805 aaKnown RBP31.54■■■□□ 2.64
PFDN2-201ENST00000368010 SRP68Q9UHB9 627 aaKnown RBP31.54■■■□□ 2.64
PFDN2-201ENST00000368010 ADAMTS8Q9UP79 889 aa31.54■■■□□ 2.64
PFDN2-201ENST00000368010 COL15A1P39059 1388 aa31.54■■■□□ 2.64
PFDN2-201ENST00000368010 TMPOP42166 694 aaKnown RBP31.53■■■□□ 2.64
PFDN2-201ENST00000368010 RUNDC1Q96C34 613 aa31.53■■■□□ 2.64
PFDN2-201ENST00000368010 THUMPD2Q9BTF0 503 aaKnown RBP31.53■■■□□ 2.64
PFDN2-201ENST00000368010 LMOD3Q0VAK6 560 aa31.52■■■□□ 2.64
PFDN2-201ENST00000368010 ZPR1O75312 459 aa31.5■■■□□ 2.63
PFDN2-201ENST00000368010 SNRPA1P09661 255 aaKnown RBP31.5■■■□□ 2.63
PFDN2-201ENST00000368010 MIS18AQ9NYP9 233 aa31.5■■■□□ 2.63
PFDN2-201ENST00000368010 RRP7AQ9Y3A4 280 aaKnown RBP31.48■■■□□ 2.63
PFDN2-201ENST00000368010 ANP32CO43423 234 aa31.47■■■□□ 2.63
PFDN2-201ENST00000368010 EIF5P55010 431 aaKnown RBP31.47■■■□□ 2.63
PFDN2-201ENST00000368010 FKBP8Q14318 412 aa31.47■■■□□ 2.63
PFDN2-201ENST00000368010 USPL1Q5W0Q7 1092 aa31.47■■■□□ 2.63
PFDN2-201ENST00000368010 NARFQ9UHQ1 456 aa31.47■■■□□ 2.63
PFDN2-201ENST00000368010 PARP3Q9Y6F1 533 aa31.47■■■□□ 2.63
PFDN2-201ENST00000368010 A0A087WZG4 1122 aa31.46■■■□□ 2.63
PFDN2-201ENST00000368010 USP16Q9Y5T5 823 aa31.46■■■□□ 2.63
PFDN2-201ENST00000368010 PRAMEF22A3QJZ6 481 aa31.45■■■□□ 2.63
PFDN2-201ENST00000368010 A1BGP04217 495 aa31.45■■■□□ 2.63
PFDN2-201ENST00000368010 IL6STP40189 918 aaPredicted RBP31.45■■■□□ 2.63
PFDN2-201ENST00000368010 KDM3BQ7LBC6 1761 aa31.45■■■□□ 2.62
PFDN2-201ENST00000368010 NEUROD2Q15784 382 aa31.44■■■□□ 2.62
PFDN2-201ENST00000368010 GPR162Q16538 588 aa31.44■■■□□ 2.62
PFDN2-201ENST00000368010 ZNF330Q9Y3S2 320 aaPredicted RBP31.44■■■□□ 2.62
PFDN2-201ENST00000368010 NPM2Q86SE8 214 aaKnown RBP31.43■■■□□ 2.62
PFDN2-201ENST00000368010 PELP1Q8IZL8 1130 aaKnown RBP31.43■■■□□ 2.62
PFDN2-201ENST00000368010 EIF4A1P60842 406 aaKnown RBP31.4■■■□□ 2.62
PFDN2-201ENST00000368010 TSPYL4Q9UJ04 414 aa31.4■■■□□ 2.62
PFDN2-201ENST00000368010 C10orf71Q711Q0 1435 aa31.4■■■□□ 2.62
PFDN2-201ENST00000368010 DDR1Q08345 913 aa31.39■■■□□ 2.62
PFDN2-201ENST00000368010 CCDC184Q52MB2 194 aa31.39■■■□□ 2.62
PFDN2-201ENST00000368010 BCL2L12Q9HB09 334 aa31.38■■■□□ 2.61
PFDN2-201ENST00000368010 TM4SF1P30408 202 aa31.37■■■□□ 2.61
PFDN2-201ENST00000368010 BABAM1Q9NWV8 329 aa31.37■■■□□ 2.61
PFDN2-201ENST00000368010 TRIM35Q9UPQ4 493 aa31.37■■■□□ 2.61
PFDN2-201ENST00000368010 GIGYF1O75420 1035 aaPredicted RBP31.36■■■□□ 2.61
PFDN2-201ENST00000368010 PIP4K2AP48426 406 aaPredicted RBP31.36■■■□□ 2.61
PFDN2-201ENST00000368010 TBC1D2BQ9UPU7 963 aa31.36■■■□□ 2.61
PFDN2-201ENST00000368010 LAMB4A4D0S4 1761 aa31.35■■■□□ 2.61
PFDN2-201ENST00000368010 POLRMTO00411 1230 aaKnown RBP31.35■■■□□ 2.61
PFDN2-201ENST00000368010 NFIXQ14938 502 aa31.35■■■□□ 2.61
PFDN2-201ENST00000368010 KIF13BQ9NQT8 1826 aa31.34■■■□□ 2.61
PFDN2-201ENST00000368010 MRS2Q9HD23 443 aa31.34■■■□□ 2.61
PFDN2-201ENST00000368010 SCN7AQ01118 1682 aa31.34■■■□□ 2.61
PFDN2-201ENST00000368010 TGFB2P61812 414 aa31.33■■■□□ 2.61
PFDN2-201ENST00000368010 DZIP3Q86Y13 1208 aaKnown RBP31.33■■■□□ 2.61
PFDN2-201ENST00000368010 APAF1O14727 1248 aa31.32■■■□□ 2.6
PFDN2-201ENST00000368010 YBX3P16989 372 aaKnown RBP eCLIP31.32■■■□□ 2.61e-6■■□□□ 12.7
PFDN2-201ENST00000368010 YY1P25490 414 aa31.32■■■□□ 2.6
PFDN2-201ENST00000368010 PXDNLA1KZ92 1463 aa31.32■■■□□ 2.6
PFDN2-201ENST00000368010 NBPF26B4DH59 902 aa31.31■■■□□ 2.6
PFDN2-201ENST00000368010 NBPF10Q6P3W6 841 aaKnown RBP31.31■■■□□ 2.6
PFDN2-201ENST00000368010 NBPF15Q8N660 670 aa31.31■■■□□ 2.6
PFDN2-201ENST00000368010 GRIN3BO60391 1043 aa31.3■■■□□ 2.6
PFDN2-201ENST00000368010 CAMTA2O94983 1202 aa31.29■■■□□ 2.6
PFDN2-201ENST00000368010 BICDL1Q6ZP65 573 aa31.28■■■□□ 2.6
PFDN2-201ENST00000368010 CHL1O00533 1208 aa31.27■■■□□ 2.6
PFDN2-201ENST00000368010 SERPINB2P05120 415 aa31.27■■■□□ 2.6
PFDN2-201ENST00000368010 TBC1D9BQ66K14 1250 aa31.27■■■□□ 2.6
PFDN2-201ENST00000368010 WWC3Q9ULE0 1092 aa31.27■■■□□ 2.6
PFDN2-201ENST00000368010 LAS1LQ9Y4W2 734 aaKnown RBP31.27■■■□□ 2.6
PFDN2-201ENST00000368010 KIAA1551Q9HCM1 1747 aa31.27■■■□□ 2.6
PFDN2-201ENST00000368010 A0A0G2JLW4 131 aa31.25■■■□□ 2.59
PFDN2-201ENST00000368010 BCORQ6W2J9 1755 aa31.25■■■□□ 2.59
PFDN2-201ENST00000368010 DPEP1P16444 411 aa31.24■■■□□ 2.59
PFDN2-201ENST00000368010 ZNF652Q9Y2D9 606 aa31.24■■■□□ 2.59
PFDN2-201ENST00000368010 NRXN2Q9P2S2 1712 aa31.23■■■□□ 2.59
PFDN2-201ENST00000368010 ERBB4Q15303 1308 aa31.23■■■□□ 2.59
PFDN2-201ENST00000368010 CARMIL3Q8ND23 1372 aa31.22■■■□□ 2.59
PFDN2-201ENST00000368010 CALD1Q05682 793 aaKnown RBP31.22■■■□□ 2.59
PFDN2-201ENST00000368010 N4BP2Q86UW6 1770 aaPredicted RBP31.22■■■□□ 2.59
PFDN2-201ENST00000368010 CLEC4GQ6UXB4 293 aa31.21■■■□□ 2.59
PFDN2-201ENST00000368010 CFAP44Q96MT7 982 aa31.21■■■□□ 2.59
PFDN2-201ENST00000368010 AFDNP55196 1824 aaKnown RBP31.21■■■□□ 2.59
PFDN2-201ENST00000368010 RGL2O15211 777 aa31.2■■■□□ 2.59
PFDN2-201ENST00000368010 SETDB2Q96T68 719 aa31.2■■■□□ 2.59
PFDN2-201ENST00000368010 MYL6BP14649 208 aa31.19■■■□□ 2.58
PFDN2-201ENST00000368010 EIF2S2P20042 333 aaKnown RBP31.19■■■□□ 2.58
PFDN2-201ENST00000368010 NGEFQ8N5V2 710 aa31.19■■■□□ 2.58
PFDN2-201ENST00000368010 CHD4Q14839 1912 aa31.18■■■□□ 2.58
PFDN2-201ENST00000368010 UTRNP46939 3433 aa31.18■■■□□ 2.58
PFDN2-201ENST00000368010 BCS1LQ9Y276 419 aa31.17■■■□□ 2.58
PFDN2-201ENST00000368010 IFT57Q9NWB7 429 aa31.16■■■□□ 2.58
PFDN2-201ENST00000368010 KCNA3P22001 575 aa31.15■■■□□ 2.58
PFDN2-201ENST00000368010 CHRNA5P30532 468 aa31.15■■■□□ 2.58
PFDN2-201ENST00000368010 KRT24Q2M2I5 525 aa31.15■■■□□ 2.58
PFDN2-201ENST00000368010 KIF6Q6ZMV9 814 aa31.15■■■□□ 2.58
PFDN2-201ENST00000368010 PIM2Q9P1W9 311 aa31.15■■■□□ 2.58
PFDN2-201ENST00000368010 NPHP1O15259 732 aa31.14■■■□□ 2.58
PFDN2-201ENST00000368010 ZNF853P0CG23 659 aa31.14■■■□□ 2.58
PFDN2-201ENST00000368010 GNAI1P63096 354 aa31.14■■■□□ 2.58
PFDN2-201ENST00000368010 PRR5LQ6MZQ0 368 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms