RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PABPN1LA6NDY0 278 aaKnown RBP19.31■□□□□ 0.68
NID1-202ENST00000366595 ZNF692Q9BU19 519 aaPredicted RBP19.31■□□□□ 0.68
NID1-202ENST00000366595 SRRTQ9BXP5 876 aaKnown RBP19.31■□□□□ 0.68
NID1-202ENST00000366595 LRRC27Q9C0I9 530 aa19.31■□□□□ 0.68
NID1-202ENST00000366595 TRMT1Q9NXH9 659 aaKnown RBP19.31■□□□□ 0.68
NID1-202ENST00000366595 SPG7Q9UQ90 795 aa19.31■□□□□ 0.68
NID1-202ENST00000366595 TMC6Q7Z403 805 aa19.31■□□□□ 0.68
NID1-202ENST00000366595 USP5P45974 858 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 CABP4P57796 275 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 CCDC77Q9BR77 488 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 ARFGAP3Q9NP61 516 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 KIAA0753Q2KHM9 967 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 EHMT1Q9H9B1 1298 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 ANKS4BQ8N8V4 417 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 LIMCH1Q9UPQ0 1083 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 MSL1Q68DK7 614 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 TTC21AQ8NDW8 1320 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 MX1P20591 662 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 ABTB2Q8N961 1025 aa19.3■□□□□ 0.68
NID1-202ENST00000366595 PTPRGP23470 1445 aa19.29■□□□□ 0.68
NID1-202ENST00000366595 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
NID1-202ENST00000366595 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
NID1-202ENST00000366595 TMOD2Q9NZR1 351 aa19.29■□□□□ 0.68
NID1-202ENST00000366595 CCDC12Q8WUD4 166 aaPredicted RBP19.29■□□□□ 0.68
NID1-202ENST00000366595 ADCY5O95622 1261 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 FERMT2Q96AC1 680 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 FSIP1Q8NA03 581 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 SMC6Q96SB8 1091 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 DHX29Q7Z478 1369 aaKnown RBP19.28■□□□□ 0.68
NID1-202ENST00000366595 NOL3O60936 208 aaKnown RBP19.28■□□□□ 0.68
NID1-202ENST00000366595 ZSCAN29Q8IWY8 852 aaPredicted RBP19.28■□□□□ 0.68
NID1-202ENST00000366595 WDR66Q8TBY9 1149 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 RNF41Q9H4P4 317 aaPredicted RBP19.28■□□□□ 0.68
NID1-202ENST00000366595 A0A087WZG4 1122 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 A0A1W2PRG0 241 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 IGHMBP2P38935 993 aaKnown RBP19.28■□□□□ 0.68
NID1-202ENST00000366595 PRPHP41219 470 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 GNG11P61952 73 aa19.28■□□□□ 0.68
NID1-202ENST00000366595 LRRC45Q96CN5 670 aa19.27■□□□□ 0.68
NID1-202ENST00000366595 CEP83Q9Y592 693 aa19.27■□□□□ 0.68
NID1-202ENST00000366595 IQCGQ9H095 443 aaKnown RBP19.27■□□□□ 0.68
NID1-202ENST00000366595 JADE2Q9NQC1 790 aa19.27■□□□□ 0.68
NID1-202ENST00000366595 RASAL2Q9UJF2 1139 aa19.27■□□□□ 0.68
NID1-202ENST00000366595 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.68
NID1-202ENST00000366595 RBM5P52756 815 aaKnown RBP eCLIP19.27■□□□□ 0.68
NID1-202ENST00000366595 CTAGE15A4D2H0 777 aa19.27■□□□□ 0.67
NID1-202ENST00000366595 IDH1O75874 414 aaKnown RBP19.27■□□□□ 0.67
NID1-202ENST00000366595 CTAGE8P0CG41 777 aa19.27■□□□□ 0.67
NID1-202ENST00000366595 DNA2P51530 1060 aa19.27■□□□□ 0.67
NID1-202ENST00000366595 CCDC40Q4G0X9 1142 aa19.27■□□□□ 0.67
NID1-202ENST00000366595 CTAGE6Q86UF2 777 aa19.27■□□□□ 0.67
NID1-202ENST00000366595 CTAGE4Q8IX94 777 aa19.27■□□□□ 0.67
NID1-202ENST00000366595 CPLX3Q8WVH0 158 aa19.27■□□□□ 0.67
NID1-202ENST00000366595 ZHX1Q9UKY1 873 aaPredicted RBP19.27■□□□□ 0.67
NID1-202ENST00000366595 CCDC194A0A1B0GVG4 234 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 PRPF40BQ6NWY9 871 aaKnown RBP19.26■□□□□ 0.67
NID1-202ENST00000366595 ZNF530Q6P9A1 599 aaPredicted RBP19.26■□□□□ 0.67
NID1-202ENST00000366595 NAP1L3Q99457 506 aaPredicted RBP19.26■□□□□ 0.67
NID1-202ENST00000366595 UBA5Q9GZZ9 404 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.26■□□□□ 0.672e-6■□□□□ 11.1
NID1-202ENST00000366595 FGD6Q6ZV73 1430 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 BAG4O95429 457 aaKnown RBP19.26■□□□□ 0.67
NID1-202ENST00000366595 TUBBP07437 444 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 SULT6B1Q6IMI4 303 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 UBE2Q2Q8WVN8 375 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 CALML4Q96GE6 196 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 GTPBP4Q9BZE4 634 aaKnown RBP19.26■□□□□ 0.67
NID1-202ENST00000366595 ANAPC4Q9UJX5 808 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 CUL5Q93034 780 aa19.26■□□□□ 0.67
NID1-202ENST00000366595 NOP2P46087 812 aaKnown RBP19.26■□□□□ 0.67
NID1-202ENST00000366595 ZNF165P49910 485 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 IL1RAPL2Q9NP60 686 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
NID1-202ENST00000366595 IQCA1Q86XH1 822 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 RAB3IL1Q8TBN0 382 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 CYLC1P35663 651 aaPredicted RBP19.25■□□□□ 0.67
NID1-202ENST00000366595 PRPF4BQ13523 1007 aaKnown RBP19.25■□□□□ 0.67
NID1-202ENST00000366595 CTAGE1Q96RT6 745 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 SSX2IPQ9Y2D8 614 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 MXRA7P84157 204 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 ARFGAP2Q8N6H7 521 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 TCP11L1Q9NUJ3 509 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
NID1-202ENST00000366595 SELENOOQ9BVL4 669 aa19.24■□□□□ 0.67
NID1-202ENST00000366595 CCDC121Q6ZUS5 278 aa19.24■□□□□ 0.67
NID1-202ENST00000366595 RMND1Q9NWS8 449 aa19.24■□□□□ 0.67
NID1-202ENST00000366595 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
NID1-202ENST00000366595 HFM1A2PYH4 1435 aa19.24■□□□□ 0.67
NID1-202ENST00000366595 UBE2HP62256 183 aa19.24■□□□□ 0.67
NID1-202ENST00000366595 SPAG1Q07617 926 aa19.24■□□□□ 0.67
NID1-202ENST00000366595 SLC12A7Q9Y666 1083 aa19.24■□□□□ 0.67
NID1-202ENST00000366595 FCHSD2O94868 740 aa19.23■□□□□ 0.67
NID1-202ENST00000366595 KLHL40Q2TBA0 621 aa19.23■□□□□ 0.67
NID1-202ENST00000366595 NAPBQ9H115 298 aa19.23■□□□□ 0.67
NID1-202ENST00000366595 CKAP2LQ8IYA6 745 aa19.23■□□□□ 0.67
NID1-202ENST00000366595 RSPH14Q9UHP6 348 aa19.23■□□□□ 0.67
NID1-202ENST00000366595 SCLT1Q96NL6 688 aa19.23■□□□□ 0.67
NID1-202ENST00000366595 NUTM2GQ5VZR2 741 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms