RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 ANXA1P04083 346 aa24.68■■□□□ 1.54
SMURF1-201ENST00000361125 HSP90AB3PQ58FF7 597 aa24.68■■□□□ 1.54
SMURF1-201ENST00000361125 CBFA2T2O43439 604 aa24.68■■□□□ 1.54
SMURF1-201ENST00000361125 MAP3K12Q12852 859 aa24.68■■□□□ 1.54
SMURF1-201ENST00000361125 PDCL3Q9H2J4 239 aa24.68■■□□□ 1.54
SMURF1-201ENST00000361125 CCDC82Q8N4S0 544 aa24.68■■□□□ 1.54
SMURF1-201ENST00000361125 NGLY1Q96IV0 654 aa24.68■■□□□ 1.54
SMURF1-201ENST00000361125 PARD3Q8TEW0 1356 aa24.67■■□□□ 1.54
SMURF1-201ENST00000361125 CFAP43Q8NDM7 1665 aa24.67■■□□□ 1.54
SMURF1-201ENST00000361125 RRP9O43818 475 aaKnown RBP24.66■■□□□ 1.54
SMURF1-201ENST00000361125 ERCC4Q92889 916 aaPredicted RBP24.66■■□□□ 1.54
SMURF1-201ENST00000361125 PI4KAP2A4QPH2 592 aa24.66■■□□□ 1.54
SMURF1-201ENST00000361125 RANBP6O60518 1105 aaKnown RBP24.66■■□□□ 1.54
SMURF1-201ENST00000361125 PI4KAP1Q8N8J0 262 aa24.66■■□□□ 1.54
SMURF1-201ENST00000361125 ZNF219Q9P2Y4 722 aaPredicted RBP24.66■■□□□ 1.54
SMURF1-201ENST00000361125 CRACR2BQ8N4Y2 399 aaPredicted RBP24.66■■□□□ 1.54
SMURF1-201ENST00000361125 SYCP2Q9BX26 1530 aa24.66■■□□□ 1.54
SMURF1-201ENST00000361125 BMP2KQ9NSY1 1161 aaPredicted RBP24.66■■□□□ 1.54
SMURF1-201ENST00000361125 TMOD2Q9NZR1 351 aa24.66■■□□□ 1.54
SMURF1-201ENST00000361125 ZNF213O14771 459 aa24.65■■□□□ 1.54
SMURF1-201ENST00000361125 ATP10BO94823 1461 aa24.65■■□□□ 1.54
SMURF1-201ENST00000361125 CEP131Q9UPN4 1083 aa24.65■■□□□ 1.54
SMURF1-201ENST00000361125 MAP3K11Q16584 847 aa24.65■■□□□ 1.54
SMURF1-201ENST00000361125 SEC63Q9UGP8 760 aaKnown RBP24.65■■□□□ 1.54
SMURF1-201ENST00000361125 GOLIM4O00461 696 aa24.64■■□□□ 1.54
SMURF1-201ENST00000361125 RPGRQ92834 1020 aaKnown RBP24.64■■□□□ 1.54
SMURF1-201ENST00000361125 NOM1Q5C9Z4 860 aaKnown RBP24.64■■□□□ 1.54
SMURF1-201ENST00000361125 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.53
SMURF1-201ENST00000361125 C8orf34Q49A92 452 aa24.64■■□□□ 1.53
SMURF1-201ENST00000361125 PPP1R42Q7Z4L9 355 aa24.64■■□□□ 1.53
SMURF1-201ENST00000361125 FILIP1Q7Z7B0 1213 aa24.64■■□□□ 1.53
SMURF1-201ENST00000361125 SEPT11Q9NVA2 429 aaKnown RBP24.64■■□□□ 1.53
SMURF1-201ENST00000361125 MYO6Q9UM54 1294 aa24.64■■□□□ 1.53
SMURF1-201ENST00000361125 CWC25Q9NXE8 425 aaPredicted RBP24.63■■□□□ 1.53
SMURF1-201ENST00000361125 TBC1D9Q6ZT07 1266 aa24.63■■□□□ 1.53
SMURF1-201ENST00000361125 PPIP5K1Q6PFW1 1433 aa24.63■■□□□ 1.53
SMURF1-201ENST00000361125 SNRKQ9NRH2 765 aa24.63■■□□□ 1.53
SMURF1-201ENST00000361125 PLCH2O75038 1416 aa24.63■■□□□ 1.53
SMURF1-201ENST00000361125 CCT2P78371 535 aaKnown RBP24.63■■□□□ 1.53
SMURF1-201ENST00000361125 DUOX2Q9NRD8 1548 aa24.63■■□□□ 1.53
SMURF1-201ENST00000361125 PIK3R4Q99570 1358 aa24.63■■□□□ 1.53
SMURF1-201ENST00000361125 UBE3BQ7Z3V4 1068 aa24.62■■□□□ 1.53
SMURF1-201ENST00000361125 EVI5LQ96CN4 794 aa24.62■■□□□ 1.53
SMURF1-201ENST00000361125 ASXL2Q76L83 1435 aa24.62■■□□□ 1.53
SMURF1-201ENST00000361125 ZNF287Q9HBT7 754 aa24.62■■□□□ 1.53
SMURF1-201ENST00000361125 BMP2KLQ5H9B9 411 aa24.62■■□□□ 1.53
SMURF1-201ENST00000361125 SLC12A7Q9Y666 1083 aa24.62■■□□□ 1.53
SMURF1-201ENST00000361125 ASXL1Q8IXJ9 1541 aa24.62■■□□□ 1.53
SMURF1-201ENST00000361125 C8orf76Q96K31 380 aa24.61■■□□□ 1.53
SMURF1-201ENST00000361125 MATR3P43243 847 aaKnown RBP eCLIP24.61■■□□□ 1.533e-7■■■■□ 24.5
SMURF1-201ENST00000361125 SMTNL1A8MU46 457 aa24.61■■□□□ 1.53
SMURF1-201ENST00000361125 CCDC112Q8NEF3 446 aa24.6■■□□□ 1.53
SMURF1-201ENST00000361125 TCOF1Q13428 1488 aaKnown RBP24.6■■□□□ 1.53
SMURF1-201ENST00000361125 RDXP35241 583 aaKnown RBP24.6■■□□□ 1.53
SMURF1-201ENST00000361125 SH2B1Q9NRF2 756 aaPredicted RBP24.6■■□□□ 1.53
SMURF1-201ENST00000361125 ECHDC1Q9NTX5 307 aa24.6■■□□□ 1.53
SMURF1-201ENST00000361125 DHX8Q14562 1220 aaKnown RBP24.6■■□□□ 1.53
SMURF1-201ENST00000361125 CCDC181Q5TID7 509 aa24.6■■□□□ 1.53
SMURF1-201ENST00000361125 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
SMURF1-201ENST00000361125 CHPF2Q9P2E5 772 aa24.6■■□□□ 1.53
SMURF1-201ENST00000361125 ZRANB1Q9UGI0 708 aa24.6■■□□□ 1.53
SMURF1-201ENST00000361125 PRAG1Q86YV5 1406 aa24.59■■□□□ 1.53
SMURF1-201ENST00000361125 HMGB1P09429 215 aaKnown RBP24.59■■□□□ 1.53
SMURF1-201ENST00000361125 ZNF444Q8N0Y2 327 aaPredicted RBP24.59■■□□□ 1.53
SMURF1-201ENST00000361125 LIMCH1Q9UPQ0 1083 aa24.59■■□□□ 1.53
SMURF1-201ENST00000361125 GOLGA8BA8MQT2 603 aa24.59■■□□□ 1.53
SMURF1-201ENST00000361125 SLC4A8Q2Y0W8 1093 aa24.59■■□□□ 1.53
SMURF1-201ENST00000361125 LDHAL6AQ6ZMR3 332 aa24.59■■□□□ 1.53
SMURF1-201ENST00000361125 PCDHB15Q9Y5E8 787 aa24.59■■□□□ 1.53
SMURF1-201ENST00000361125 CCDC144CPQ8IYA2 1237 aa24.58■■□□□ 1.53
SMURF1-201ENST00000361125 IFIT3O14879 490 aaKnown RBP24.58■■□□□ 1.53
SMURF1-201ENST00000361125 IL16Q14005 1332 aa24.58■■□□□ 1.53
SMURF1-201ENST00000361125 SNRPA1P09661 255 aaKnown RBP24.58■■□□□ 1.53
SMURF1-201ENST00000361125 GOLGA8AA7E2F4 631 aa24.57■■□□□ 1.52
SMURF1-201ENST00000361125 CTCFLQ8NI51 663 aaPredicted RBP24.57■■□□□ 1.52
SMURF1-201ENST00000361125 LUC7LQ9NQ29 371 aaKnown RBP24.57■■□□□ 1.52
SMURF1-201ENST00000361125 SSRP1Q08945 709 aaKnown RBP24.57■■□□□ 1.52
SMURF1-201ENST00000361125 NUP153P49790 1475 aaKnown RBP24.57■■□□□ 1.52
SMURF1-201ENST00000361125 CFAP100Q494V2 611 aa24.57■■□□□ 1.52
SMURF1-201ENST00000361125 CTTNBP2Q8WZ74 1663 aa24.57■■□□□ 1.52
SMURF1-201ENST00000361125 PDIA4P13667 645 aaKnown RBP24.57■■□□□ 1.52
SMURF1-201ENST00000361125 A2MP01023 1474 aa24.57■■□□□ 1.52
SMURF1-201ENST00000361125 HDAC1Q13547 482 aaPredicted RBP24.56■■□□□ 1.52
SMURF1-201ENST00000361125 CCDC96Q2M329 555 aa24.56■■□□□ 1.52
SMURF1-201ENST00000361125 EIF5P55010 431 aaKnown RBP24.56■■□□□ 1.52
SMURF1-201ENST00000361125 TTC22Q5TAA0 569 aa24.56■■□□□ 1.52
SMURF1-201ENST00000361125 HAND2P61296 217 aa24.56■■□□□ 1.52
SMURF1-201ENST00000361125 KRI1Q8N9T8 703 aaKnown RBP24.56■■□□□ 1.52
SMURF1-201ENST00000361125 PPFIA3O75145 1194 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 IQCA1Q86XH1 822 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 RAB11FIP4Q86YS3 637 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 TEX13AQ9BXU3 409 aaPredicted RBP24.55■■□□□ 1.52
SMURF1-201ENST00000361125 SLC39A6Q13433 755 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 AXDND1Q5T1B0 1012 aaPredicted RBP24.55■■□□□ 1.52
SMURF1-201ENST00000361125 CCDC196A0A1B0GTZ2 297 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 NUCB1Q02818 461 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 CCDC183Q5T5S1 534 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 PKNOX2Q96KN3 472 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 PLEKHH1Q9ULM0 1364 aa24.55■■□□□ 1.52
SMURF1-201ENST00000361125 RIMS2Q9UQ26 1411 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms