RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 KCNQ4P56696 695 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 CNBD1Q8NA66 436 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 MAP3K19Q56UN5 1328 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 ERICH2A1L162 156 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 SIL1Q9H173 461 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 FLT4P35916 1363 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 RALYLQ86SE5 291 aaKnown RBP8.44□□□□□ -1.06
RAB5B-201ENST00000360299 CHD1LQ86WJ1 897 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 DCAF5Q96JK2 942 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 TCEAL9Q9UHQ7 104 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 SMC3Q9UQE7 1217 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 IQGAP1P46940 1657 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 PTPRCP08575 1304 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 FAM83GA6ND36 823 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 ECM2O94769 699 aaPredicted RBP8.44□□□□□ -1.06
RAB5B-201ENST00000360299 FSD1Q9BTV5 496 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.44□□□□□ -1.06
RAB5B-201ENST00000360299 DPY19L2Q6NUT2 758 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 CLTCQ00610 1675 aaKnown RBP8.44□□□□□ -1.06
RAB5B-201ENST00000360299 PIK3C2GO75747 1445 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 SSH1Q8WYL5 1049 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 NLRP3Q96P20 1036 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 BACH2Q9BYV9 841 aa8.44□□□□□ -1.06
RAB5B-201ENST00000360299 TET3O43151 1660 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 CCDC158Q5M9N0 1113 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 CCDC24Q8N4L8 307 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 SPATA31A3Q5VYP0 1347 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 NF2P35240 595 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 DEFB132Q7Z7B7 95 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 MAP3K4Q9Y6R4 1608 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 RAB11FIP3O75154 756 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 ARHGAP45Q92619 1136 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 AEBP1Q8IUX7 1158 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 TMEM57Q8N5G2 664 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 RASSF8Q8NHQ8 419 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 KIDINS220Q9ULH0 1771 aa8.43□□□□□ -1.06
RAB5B-201ENST00000360299 RNF123Q5XPI4 1314 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 EIF4A2Q14240 407 aaKnown RBP8.42□□□□□ -1.06
RAB5B-201ENST00000360299 AKAP4Q5JQC9 854 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 WDR78Q5VTH9 848 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 NAP1L5Q96NT1 182 aaPredicted RBP8.42□□□□□ -1.06
RAB5B-201ENST00000360299 ATP5J2-PTCD1G3V325 749 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 MYO1BO43795 1136 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 MARCH6O60337 910 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 PDIA4P13667 645 aaKnown RBP8.42□□□□□ -1.06
RAB5B-201ENST00000360299 PDCP20941 246 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 EIF6P56537 245 aaKnown RBP8.42□□□□□ -1.06
RAB5B-201ENST00000360299 NYXQ9GZU5 481 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
RAB5B-201ENST00000360299 ZFYVE9O95405 1425 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 DBF4Q9UBU7 674 aaPredicted RBP8.42□□□□□ -1.06
RAB5B-201ENST00000360299 TTC39AQ5SRH9 613 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.42□□□□□ -1.06
RAB5B-201ENST00000360299 HYPKQ9NX55 129 aa8.42□□□□□ -1.06
RAB5B-201ENST00000360299 RIMBP2O15034 1052 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 SRGAP3O43295 1099 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 EYA1Q99502 592 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 MROH2AA6NES4 1674 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 ZSCAN25Q6NSZ9 544 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 SAFBQ15424 915 aaKnown RBP eCLIP8.41□□□□□ -1.06
RAB5B-201ENST00000360299 SART3Q15020 963 aaKnown RBP8.41□□□□□ -1.06
RAB5B-201ENST00000360299 CAVIN4Q5BKX8 364 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 METTL24Q5JXM2 366 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 IL27Q8NEV9 243 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 KIF1BPQ96EK5 621 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 C1orf115Q9H7X2 142 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 RAI14Q9P0K7 980 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 CEP126Q9P2H0 1117 aa8.41□□□□□ -1.06
RAB5B-201ENST00000360299 PPRC1Q5VV67 1664 aaKnown RBP8.41□□□□□ -1.06
RAB5B-201ENST00000360299 GSE1Q14687 1217 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 ANKRD1Q15327 319 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 CDC5LQ99459 802 aaKnown RBP8.4□□□□□ -1.06
RAB5B-201ENST00000360299 ABCF2Q9UG63 623 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 HOOK1Q9UJC3 728 aaKnown RBP8.4□□□□□ -1.06
RAB5B-201ENST00000360299 LARGE2Q8N3Y3 721 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 INSRP06213 1382 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 MYOM1P52179 1685 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 PLEKHG3A1L390 1219 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 ANXA1P04083 346 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 MCTP1Q6DN14 999 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 NFXL1Q6ZNB6 911 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 HDAC9Q9UKV0 1011 aa8.4□□□□□ -1.06
RAB5B-201ENST00000360299 F8W031 263 aaPredicted RBP8.4□□□□□ -1.07
RAB5B-201ENST00000360299 DNAJC2Q99543 621 aaKnown RBP8.4□□□□□ -1.07
RAB5B-201ENST00000360299 NSFL1CQ9UNZ2 370 aaKnown RBP8.4□□□□□ -1.07
RAB5B-201ENST00000360299 DIP2CQ9Y2E4 1556 aa8.4□□□□□ -1.07
RAB5B-201ENST00000360299 XBP1P17861 261 aa8.39□□□□□ -1.07
RAB5B-201ENST00000360299 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 UTP14AQ9BVJ6 771 aaKnown RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 THRAP3Q9Y2W1 955 aaKnown RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 SOS1Q07889 1333 aaPredicted RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 A0A1W2PP64 1363 aa8.39□□□□□ -1.07
RAB5B-201ENST00000360299 GOLGA6L19H0YKK7 550 aa8.39□□□□□ -1.07
RAB5B-201ENST00000360299 RBM17Q96I25 401 aaKnown RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 ABCA6Q8N139 1617 aa8.39□□□□□ -1.07
RAB5B-201ENST00000360299 SLC3A2P08195 630 aaKnown RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 STK11IPQ8N1F8 1099 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms