RNA–Protein interactions for RNA: ENST00000357895.9

NEDD4L-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-203ENST00000357895 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-203ENST00000357895 CKAP2LQ8IYA6 745 aa11.33□□□□□ -0.6
NEDD4L-203ENST00000357895 PDRG1Q9NUG6 133 aa11.33□□□□□ -0.6
NEDD4L-203ENST00000357895 PYCARDQ9ULZ3 195 aa11.33□□□□□ -0.6
NEDD4L-203ENST00000357895 ARHGEF40Q8TER5 1519 aa11.33□□□□□ -0.6
NEDD4L-203ENST00000357895 TPM3P06753 285 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 PRPF40BQ6NWY9 871 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 PPP1R42Q7Z4L9 355 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 NECAB1Q8N987 351 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 IL25Q9H293 177 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 C14orf37Q86TY3 774 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 C16orf45Q96MC5 204 aaPredicted RBP11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 CPSF1Q10570 1443 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 PTGS1P23219 599 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 ZNF771Q7L3S4 317 aaPredicted RBP11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 RASEFQ8IZ41 740 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 NUP62CLQ9H1M0 184 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 PODXL2Q9NZ53 605 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 MLH3Q9UHC1 1453 aa11.32□□□□□ -0.6
NEDD4L-203ENST00000357895 PLEKHG5O94827 1062 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 U2AF2P26368 475 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■■■■■ 27.9
NEDD4L-203ENST00000357895 HDGFL1Q5TGJ6 251 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 KRT85P78386 507 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 MAP3K11Q16584 847 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 FAM173BQ6P4H8 233 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 BICD2Q8TD16 824 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 TNMDQ9H2S6 317 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 ATP7BP35670 1465 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
NEDD4L-203ENST00000357895 KNDC1Q76NI1 1749 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 SGSM2O43147 1006 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 CCDC186Q7Z3E2 898 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 TFIP11Q9UBB9 837 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 HECW2Q9P2P5 1572 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 RAD50Q92878 1312 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 LUZP1Q86V48 1076 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 KIF1BPQ96EK5 621 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 SOS1Q07889 1333 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 DMTNQ08495 405 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 PLPPR3Q6T4P5 718 aa11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 NGDNQ8NEJ9 315 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-203ENST00000357895 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 LARGE1O95461 756 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 IFIT2P09913 472 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 STK3Q13188 491 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 KIAA1524Q8TCG1 905 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 TCEANC2Q96MN5 208 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 STAP2Q9UGK3 403 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 SSH2Q76I76 1423 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 MAP3K19Q56UN5 1328 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 NUTM2GQ5VZR2 741 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 CLASRPQ8N2M8 674 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 GPATCH3Q96I76 525 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
NEDD4L-203ENST00000357895 ACEP12821 1306 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 FRMPD1Q5SYB0 1578 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 FGD1P98174 961 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 TMEM87AQ8NBN3 555 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 FAM200AQ8TCP9 573 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 USP44Q9H0E7 712 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 PIK3C2BO00750 1634 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 GOLGA6L19H0YKK7 550 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 TNNT1P13805 278 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 MTMR6Q9Y217 621 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 CDC42BPGQ6DT37 1551 aa11.28□□□□□ -0.6
NEDD4L-203ENST00000357895 ZSCAN20P17040 1043 aaPredicted RBP11.27□□□□□ -0.6
NEDD4L-203ENST00000357895 TYRO3Q06418 890 aa11.27□□□□□ -0.6
NEDD4L-203ENST00000357895 LRMPQ12912 555 aa11.27□□□□□ -0.6
NEDD4L-203ENST00000357895 ANO6Q4KMQ2 910 aa11.27□□□□□ -0.6
NEDD4L-203ENST00000357895 CCDC112Q8NEF3 446 aa11.27□□□□□ -0.6
NEDD4L-203ENST00000357895 SPATA32Q96LK8 384 aa11.27□□□□□ -0.6
NEDD4L-203ENST00000357895 DACT1Q9NYF0 836 aa11.27□□□□□ -0.6
NEDD4L-203ENST00000357895 FOSBP53539 338 aa11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 SPTLC3Q9NUV7 552 aa11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 CEBPZQ03701 1054 aaKnown RBP11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 TAF7Q15545 349 aaPredicted RBP11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 HSP90AB4PQ58FF6 505 aa11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 KCNF1Q9H3M0 494 aa11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 C9orf78Q9NZ63 289 aaPredicted RBP11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 ALKQ9UM73 1620 aa11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 SALL3Q9BXA9 1300 aa11.27□□□□□ -0.61
NEDD4L-203ENST00000357895 YEATS2Q9ULM3 1422 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms