RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
COL4A3BP-202ENST00000357457 IL13P35225 146 aa11.75□□□□□ -0.53
COL4A3BP-202ENST00000357457 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
COL4A3BP-202ENST00000357457 DDR1Q08345 913 aa11.75□□□□□ -0.53
COL4A3BP-202ENST00000357457 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
COL4A3BP-202ENST00000357457 AMER1Q5JTC6 1135 aaPredicted RBP11.75□□□□□ -0.53
COL4A3BP-202ENST00000357457 SULT6B1Q6IMI4 303 aa11.75□□□□□ -0.53
COL4A3BP-202ENST00000357457 MORC1Q86VD1 984 aa11.75□□□□□ -0.53
COL4A3BP-202ENST00000357457 ADAMTS7Q9UKP4 1686 aa11.75□□□□□ -0.53
COL4A3BP-202ENST00000357457 POLRMTO00411 1230 aaKnown RBP11.74□□□□□ -0.53
COL4A3BP-202ENST00000357457 HSPA5P11021 654 aaKnown RBP11.74□□□□□ -0.53
COL4A3BP-202ENST00000357457 TJP1Q07157 1748 aa11.74□□□□□ -0.53
COL4A3BP-202ENST00000357457 AKAP4Q5JQC9 854 aa11.73□□□□□ -0.53
COL4A3BP-202ENST00000357457 FSTL1Q12841 308 aa11.72□□□□□ -0.53
COL4A3BP-202ENST00000357457 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
COL4A3BP-202ENST00000357457 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
COL4A3BP-202ENST00000357457 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
COL4A3BP-202ENST00000357457 KDM2BQ8NHM5 1336 aa11.71□□□□□ -0.53
COL4A3BP-202ENST00000357457 ZPR1O75312 459 aa11.71□□□□□ -0.53
COL4A3BP-202ENST00000357457 CYP19A1P11511 503 aaPredicted RBP11.71□□□□□ -0.53
COL4A3BP-202ENST00000357457 CHRNA5P30532 468 aa11.71□□□□□ -0.53
COL4A3BP-202ENST00000357457 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.53
COL4A3BP-202ENST00000357457 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
COL4A3BP-202ENST00000357457 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
COL4A3BP-202ENST00000357457 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.54
COL4A3BP-202ENST00000357457 WDR90Q96KV7 1748 aa11.7□□□□□ -0.54
COL4A3BP-202ENST00000357457 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
COL4A3BP-202ENST00000357457 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
COL4A3BP-202ENST00000357457 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
COL4A3BP-202ENST00000357457 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
COL4A3BP-202ENST00000357457 RNF181Q9P0P0 153 aa11.7□□□□□ -0.54
COL4A3BP-202ENST00000357457 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
COL4A3BP-202ENST00000357457 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
COL4A3BP-202ENST00000357457 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 NFIXQ14938 502 aa11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 C16orf71Q8IYS4 520 aaPredicted RBP11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 VSIG10Q8N0Z9 540 aa11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 MRC1P22897 1456 aa11.69□□□□□ -0.54
COL4A3BP-202ENST00000357457 CCDC88AQ3V6T2 1871 aa11.68□□□□□ -0.54
COL4A3BP-202ENST00000357457 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
COL4A3BP-202ENST00000357457 SERPINB2P05120 415 aa11.67□□□□□ -0.54
COL4A3BP-202ENST00000357457 PRELPP51888 382 aa11.67□□□□□ -0.54
COL4A3BP-202ENST00000357457 HTRA3P83110 453 aa11.67□□□□□ -0.54
COL4A3BP-202ENST00000357457 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
COL4A3BP-202ENST00000357457 TNRC6CQ9HCJ0 1690 aaKnown RBP11.67□□□□□ -0.54
COL4A3BP-202ENST00000357457 GLTPD2A6NH11 291 aa11.66□□□□□ -0.54
COL4A3BP-202ENST00000357457 PER1O15534 1290 aaPredicted RBP11.66□□□□□ -0.54
COL4A3BP-202ENST00000357457 LMNB1P20700 586 aa11.66□□□□□ -0.54
COL4A3BP-202ENST00000357457 MTHFSDQ2M296 383 aaKnown RBP11.66□□□□□ -0.54
COL4A3BP-202ENST00000357457 TTLL6Q8N841 843 aa11.66□□□□□ -0.54
COL4A3BP-202ENST00000357457 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
COL4A3BP-202ENST00000357457 DLEC1Q9Y238 1755 aa11.66□□□□□ -0.54
COL4A3BP-202ENST00000357457 COL15A1P39059 1388 aa11.66□□□□□ -0.54
COL4A3BP-202ENST00000357457 HMOX1P09601 288 aa11.65□□□□□ -0.54
COL4A3BP-202ENST00000357457 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
COL4A3BP-202ENST00000357457 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
COL4A3BP-202ENST00000357457 SMC1BQ8NDV3 1235 aa11.65□□□□□ -0.54
COL4A3BP-202ENST00000357457 UBR2Q8IWV8 1755 aa11.64□□□□□ -0.55
COL4A3BP-202ENST00000357457 VEGFAP15692 232 aaPredicted RBP11.64□□□□□ -0.55
COL4A3BP-202ENST00000357457 RASSF7Q02833 373 aa11.64□□□□□ -0.55
COL4A3BP-202ENST00000357457 DICER1Q9UPY3 1922 aaKnown RBP11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 A0A087WZG4 1122 aa11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 POTECB2RU33 542 aa11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 H0YIN7 160 aa11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 NFKBIEO00221 500 aa11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 DIAPH1O60610 1272 aaKnown RBP11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 STARD3NLO95772 234 aa11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 COL13A1Q5TAT6 717 aaPredicted RBP11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 C2CD5Q86YS7 1000 aa11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
COL4A3BP-202ENST00000357457 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
COL4A3BP-202ENST00000357457 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
COL4A3BP-202ENST00000357457 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
COL4A3BP-202ENST00000357457 FER1L6Q2WGJ9 1857 aa11.61□□□□□ -0.55
COL4A3BP-202ENST00000357457 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
COL4A3BP-202ENST00000357457 ZNF496Q96IT1 587 aaPredicted RBP11.61□□□□□ -0.55
COL4A3BP-202ENST00000357457 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
COL4A3BP-202ENST00000357457 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
COL4A3BP-202ENST00000357457 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
COL4A3BP-202ENST00000357457 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
COL4A3BP-202ENST00000357457 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
COL4A3BP-202ENST00000357457 PDE6BP35913 854 aa11.6□□□□□ -0.55
COL4A3BP-202ENST00000357457 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
COL4A3BP-202ENST00000357457 TTC5Q8N0Z6 440 aa11.6□□□□□ -0.55
COL4A3BP-202ENST00000357457 SIPA1L3O60292 1781 aaPredicted RBP11.59□□□□□ -0.55
COL4A3BP-202ENST00000357457 GNAT3A8MTJ3 354 aa11.59□□□□□ -0.55
COL4A3BP-202ENST00000357457 IL6STP40189 918 aaPredicted RBP11.59□□□□□ -0.55
COL4A3BP-202ENST00000357457 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
COL4A3BP-202ENST00000357457 DPY19L2Q6NUT2 758 aa11.59□□□□□ -0.55
COL4A3BP-202ENST00000357457 BICDL1Q6ZP65 573 aa11.59□□□□□ -0.55
COL4A3BP-202ENST00000357457 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
COL4A3BP-202ENST00000357457 TEFQ10587 303 aa11.58□□□□□ -0.56
COL4A3BP-202ENST00000357457 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
COL4A3BP-202ENST00000357457 ZNF622Q969S3 477 aaKnown RBP eCLIP11.58□□□□□ -0.563e-9■■■■□ 19.6
COL4A3BP-202ENST00000357457 TBC1D2BQ9UPU7 963 aa11.58□□□□□ -0.56
COL4A3BP-202ENST00000357457 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms