RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 AIMP1Q12904 312 aaKnown RBP35.41■■■■□ 3.26
SDCCAG3-202ENST00000357365 MRC1P22897 1456 aa35.41■■■■□ 3.26
SDCCAG3-202ENST00000357365 LARP1Q6PKG0 1096 aaKnown RBP35.4■■■■□ 3.26
SDCCAG3-202ENST00000357365 DDX21Q9NR30 783 aaKnown RBP eCLIP35.4■■■■□ 3.26
SDCCAG3-202ENST00000357365 KSR2Q6VAB6 950 aa35.39■■■■□ 3.26
SDCCAG3-202ENST00000357365 HYPKQ9NX55 129 aa35.39■■■■□ 3.26
SDCCAG3-202ENST00000357365 PARP4Q9UKK3 1724 aaKnown RBP35.39■■■■□ 3.26
SDCCAG3-202ENST00000357365 PPP1R42Q7Z4L9 355 aa35.38■■■■□ 3.25
SDCCAG3-202ENST00000357365 PLEKHG2Q9H7P9 1386 aa35.38■■■■□ 3.25
SDCCAG3-202ENST00000357365 MYL6BP14649 208 aa35.38■■■■□ 3.25
SDCCAG3-202ENST00000357365 CABP4P57796 275 aa35.38■■■■□ 3.25
SDCCAG3-202ENST00000357365 CWF19L2Q2TBE0 894 aaKnown RBP35.38■■■■□ 3.25
SDCCAG3-202ENST00000357365 USP16Q9Y5T5 823 aa35.38■■■■□ 3.25
SDCCAG3-202ENST00000357365 PIP4K2AP48426 406 aaPredicted RBP35.37■■■■□ 3.25
SDCCAG3-202ENST00000357365 ZCRB1Q8TBF4 217 aaKnown RBP35.37■■■■□ 3.25
SDCCAG3-202ENST00000357365 TBC1D2Q9BYX2 928 aa35.37■■■■□ 3.25
SDCCAG3-202ENST00000357365 IBTKQ9P2D0 1353 aaPredicted RBP35.37■■■■□ 3.25
SDCCAG3-202ENST00000357365 CDC45O75419 566 aa35.37■■■■□ 3.25
SDCCAG3-202ENST00000357365 TSHZ3Q63HK5 1081 aa35.37■■■■□ 3.25
SDCCAG3-202ENST00000357365 LRRCC1Q9C099 1032 aa35.36■■■■□ 3.25
SDCCAG3-202ENST00000357365 HSP90AB1P08238 724 aaKnown RBP35.35■■■■□ 3.25
SDCCAG3-202ENST00000357365 BECN1Q14457 450 aa35.35■■■■□ 3.25
SDCCAG3-202ENST00000357365 TTC5Q8N0Z6 440 aa35.35■■■■□ 3.25
SDCCAG3-202ENST00000357365 SSH3Q8TE77 659 aa35.35■■■■□ 3.25
SDCCAG3-202ENST00000357365 SDSP20132 328 aa35.35■■■■□ 3.25
SDCCAG3-202ENST00000357365 CARD10Q9BWT7 1032 aa35.34■■■■□ 3.25
SDCCAG3-202ENST00000357365 PDE1AP54750 535 aa35.33■■■■□ 3.25
SDCCAG3-202ENST00000357365 EVA1CP58658 441 aa35.33■■■■□ 3.25
SDCCAG3-202ENST00000357365 USP35Q9P2H5 1018 aa35.33■■■■□ 3.25
SDCCAG3-202ENST00000357365 RBM25P49756 843 aaKnown RBP35.32■■■■□ 3.24
SDCCAG3-202ENST00000357365 PCDH11XQ9BZA7 1347 aa35.32■■■■□ 3.24
SDCCAG3-202ENST00000357365 PCDH11YQ9BZA8 1340 aa35.32■■■■□ 3.24
SDCCAG3-202ENST00000357365 SRGAP3O43295 1099 aa35.32■■■■□ 3.24
SDCCAG3-202ENST00000357365 IL2RBP14784 551 aa35.31■■■■□ 3.24
SDCCAG3-202ENST00000357365 POLA2Q14181 598 aa35.31■■■■□ 3.24
SDCCAG3-202ENST00000357365 DDX54Q8TDD1 881 aaKnown RBP35.31■■■■□ 3.24
SDCCAG3-202ENST00000357365 SALL3Q9BXA9 1300 aa35.3■■■■□ 3.24
SDCCAG3-202ENST00000357365 SNRPA1P09661 255 aaKnown RBP35.3■■■■□ 3.24
SDCCAG3-202ENST00000357365 FMNL2Q96PY5 1086 aa35.29■■■■□ 3.24
SDCCAG3-202ENST00000357365 XAGE3Q8WTP9 111 aa35.29■■■■□ 3.24
SDCCAG3-202ENST00000357365 SHANK3Q9BYB0 1731 aa35.29■■■■□ 3.24
SDCCAG3-202ENST00000357365 IL1RAPL2Q9NP60 686 aa35.28■■■■□ 3.24
SDCCAG3-202ENST00000357365 C9orf78Q9NZ63 289 aaPredicted RBP35.28■■■■□ 3.24
SDCCAG3-202ENST00000357365 SURF6O75683 361 aaKnown RBP35.28■■■■□ 3.24
SDCCAG3-202ENST00000357365 GLI3P10071 1580 aa35.27■■■■□ 3.24
SDCCAG3-202ENST00000357365 ALDH1L1O75891 902 aa35.27■■■■□ 3.24
SDCCAG3-202ENST00000357365 COPS6Q7L5N1 327 aa35.27■■■■□ 3.24
SDCCAG3-202ENST00000357365 OSBPL3Q9H4L5 887 aa35.27■■■■□ 3.24
SDCCAG3-202ENST00000357365 LRP10Q7Z4F1 713 aa35.26■■■■□ 3.24
SDCCAG3-202ENST00000357365 DDX58O95786 925 aaKnown RBP35.26■■■■□ 3.23
SDCCAG3-202ENST00000357365 RIC3Q7Z5B4 369 aa35.26■■■■□ 3.23
SDCCAG3-202ENST00000357365 SLKQ9H2G2 1235 aaPredicted RBP35.26■■■■□ 3.23
SDCCAG3-202ENST00000357365 LINS1Q8NG48 757 aa35.24■■■■□ 3.23
SDCCAG3-202ENST00000357365 KIF2CQ99661 725 aa35.24■■■■□ 3.23
SDCCAG3-202ENST00000357365 BTG4Q9NY30 223 aa35.24■■■■□ 3.23
SDCCAG3-202ENST00000357365 ROBO1Q9Y6N7 1651 aa35.24■■■■□ 3.23
SDCCAG3-202ENST00000357365 IGKV5-2P06315 115 aa35.24■■■■□ 3.23
SDCCAG3-202ENST00000357365 MX1P20591 662 aa35.23■■■■□ 3.23
SDCCAG3-202ENST00000357365 SPRYD3Q8NCJ5 442 aa35.22■■■■□ 3.23
SDCCAG3-202ENST00000357365 TUBGCP6Q96RT7 1819 aa35.21■■■■□ 3.23
SDCCAG3-202ENST00000357365 GRM8O00222 908 aa35.2■■■■□ 3.22
SDCCAG3-202ENST00000357365 NKX1-1Q15270 411 aaPredicted RBP35.2■■■■□ 3.22
SDCCAG3-202ENST00000357365 NUTM1Q86Y26 1132 aa35.2■■■■□ 3.22
SDCCAG3-202ENST00000357365 KAZALD1Q96I82 304 aa35.2■■■■□ 3.22
SDCCAG3-202ENST00000357365 SUCLG2Q96I99 432 aa35.19■■■■□ 3.22
SDCCAG3-202ENST00000357365 RHPN1Q8TCX5 695 aa35.18■■■■□ 3.22
SDCCAG3-202ENST00000357365 RTL5Q5HYW3 569 aaPredicted RBP35.18■■■■□ 3.22
SDCCAG3-202ENST00000357365 ERVV-2B6SEH9 535 aa35.17■■■■□ 3.22
SDCCAG3-202ENST00000357365 MYD88Q99836 296 aa35.17■■■■□ 3.22
SDCCAG3-202ENST00000357365 NFKBIBQ15653 356 aa35.17■■■■□ 3.22
SDCCAG3-202ENST00000357365 MTX1Q13505 466 aa35.16■■■■□ 3.22
SDCCAG3-202ENST00000357365 RAB11FIP3O75154 756 aa35.16■■■■□ 3.22
SDCCAG3-202ENST00000357365 PA2G4Q9UQ80 394 aaKnown RBP35.16■■■■□ 3.22
SDCCAG3-202ENST00000357365 LAMB4A4D0S4 1761 aa35.15■■■■□ 3.22
SDCCAG3-202ENST00000357365 ANKRD13DQ6ZTN6 518 aa35.15■■■■□ 3.22
SDCCAG3-202ENST00000357365 RBM42Q9BTD8 480 aaKnown RBP35.15■■■■□ 3.22
SDCCAG3-202ENST00000357365 NEURL1BA8MQ27 555 aa35.15■■■■□ 3.22
SDCCAG3-202ENST00000357365 PTCD1O75127 700 aaKnown RBP35.15■■■■□ 3.22
SDCCAG3-202ENST00000357365 UBR2Q8IWV8 1755 aa35.14■■■■□ 3.22
SDCCAG3-202ENST00000357365 MYT1Q01538 1121 aa35.14■■■■□ 3.22
SDCCAG3-202ENST00000357365 METTL22Q9BUU2 404 aaPredicted RBP35.14■■■■□ 3.22
SDCCAG3-202ENST00000357365 ANTXR1Q9H6X2 564 aa35.14■■■■□ 3.22
SDCCAG3-202ENST00000357365 UTYO14607 1347 aa35.14■■■■□ 3.22
SDCCAG3-202ENST00000357365 TOGARAM1Q9Y4F4 1720 aa35.14■■■■□ 3.22
SDCCAG3-202ENST00000357365 BICC1Q9H694 974 aaKnown RBP35.14■■■■□ 3.22
SDCCAG3-202ENST00000357365 STAP2Q9UGK3 403 aa35.14■■■■□ 3.22
SDCCAG3-202ENST00000357365 NBPF26B4DH59 902 aa35.13■■■■□ 3.21
SDCCAG3-202ENST00000357365 NBPF14Q5TI25 921 aa35.13■■■■□ 3.21
SDCCAG3-202ENST00000357365 NBPF10Q6P3W6 841 aaKnown RBP35.13■■■■□ 3.21
SDCCAG3-202ENST00000357365 NBPF15Q8N660 670 aa35.13■■■■□ 3.21
SDCCAG3-202ENST00000357365 JARID2Q92833 1246 aaPredicted RBP35.12■■■■□ 3.21
SDCCAG3-202ENST00000357365 KCPQ6ZWJ8 1503 aa35.12■■■■□ 3.21
SDCCAG3-202ENST00000357365 UNC5CLQ8IV45 518 aa35.12■■■■□ 3.21
SDCCAG3-202ENST00000357365 KIF1BPQ96EK5 621 aa35.12■■■■□ 3.21
SDCCAG3-202ENST00000357365 NEXNQ0ZGT2 675 aa35.11■■■■□ 3.21
SDCCAG3-202ENST00000357365 USP26Q9BXU7 913 aa35.11■■■■□ 3.21
SDCCAG3-202ENST00000357365 GCKRQ14397 625 aa35.1■■■■□ 3.21
SDCCAG3-202ENST00000357365 CD2BP2O95400 341 aaKnown RBP35.1■■■■□ 3.21
SDCCAG3-202ENST00000357365 PAPPAQ13219 1627 aa35.09■■■■□ 3.21
SDCCAG3-202ENST00000357365 ARFGEF2Q9Y6D5 1785 aa35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms