RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-206ENST00000357194 SOS1Q07889 1333 aaPredicted RBP13.91□□□□□ -0.18
UBE2D3-206ENST00000357194 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
UBE2D3-206ENST00000357194 CYP19A1P11511 503 aaPredicted RBP13.91□□□□□ -0.18
UBE2D3-206ENST00000357194 HTRA3P83110 453 aa13.91□□□□□ -0.18
UBE2D3-206ENST00000357194 FSTL1Q12841 308 aa13.91□□□□□ -0.18
UBE2D3-206ENST00000357194 NARFQ9UHQ1 456 aa13.91□□□□□ -0.18
UBE2D3-206ENST00000357194 AFDNP55196 1824 aaKnown RBP13.91□□□□□ -0.18
UBE2D3-206ENST00000357194 HMOX1P09601 288 aa13.9□□□□□ -0.18
UBE2D3-206ENST00000357194 NFIXQ14938 502 aa13.9□□□□□ -0.18
UBE2D3-206ENST00000357194 TNRC6CQ9HCJ0 1690 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-206ENST00000357194 COL15A1P39059 1388 aa13.89□□□□□ -0.19
UBE2D3-206ENST00000357194 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-206ENST00000357194 KLRG1Q96E93 195 aa13.89□□□□□ -0.19
UBE2D3-206ENST00000357194 ZBTB1Q9Y2K1 713 aa13.89□□□□□ -0.19
UBE2D3-206ENST00000357194 MRC1P22897 1456 aa13.88□□□□□ -0.19
UBE2D3-206ENST00000357194 NRXN2Q9P2S2 1712 aa13.88□□□□□ -0.19
UBE2D3-206ENST00000357194 SERPINB2P05120 415 aa13.88□□□□□ -0.19
UBE2D3-206ENST00000357194 RASSF7Q02833 373 aa13.88□□□□□ -0.19
UBE2D3-206ENST00000357194 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-206ENST00000357194 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
UBE2D3-206ENST00000357194 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
UBE2D3-206ENST00000357194 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 DIAPH1O60610 1272 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 LMNB1P20700 586 aa13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 TTLL6Q8N841 843 aa13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 SMC1BQ8NDV3 1235 aa13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 CCDC88AQ3V6T2 1871 aa13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 ZC3H4Q9UPT8 1303 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-206ENST00000357194 PCNTO95613 3336 aa13.85□□□□□ -0.19
UBE2D3-206ENST00000357194 H0YIN7 160 aa13.85□□□□□ -0.19
UBE2D3-206ENST00000357194 PRELPP51888 382 aa13.85□□□□□ -0.19
UBE2D3-206ENST00000357194 BICDL1Q6ZP65 573 aa13.85□□□□□ -0.19
UBE2D3-206ENST00000357194 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
UBE2D3-206ENST00000357194 UBR2Q8IWV8 1755 aa13.84□□□□□ -0.19
UBE2D3-206ENST00000357194 GLTPD2A6NH11 291 aa13.84□□□□□ -0.19
UBE2D3-206ENST00000357194 VEGFAP15692 232 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-206ENST00000357194 TTC5Q8N0Z6 440 aa13.84□□□□□ -0.19
UBE2D3-206ENST00000357194 CARMIL3Q8ND23 1372 aa13.83□□□□□ -0.19
UBE2D3-206ENST00000357194 STARD3NLO95772 234 aa13.83□□□□□ -0.2
UBE2D3-206ENST00000357194 EIF5P55010 431 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-206ENST00000357194 CC2D1BQ5T0F9 858 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-206ENST00000357194 A0A087WZG4 1122 aa13.82□□□□□ -0.2
UBE2D3-206ENST00000357194 NFKBIEO00221 500 aa13.82□□□□□ -0.2
UBE2D3-206ENST00000357194 PER1O15534 1290 aaPredicted RBP13.82□□□□□ -0.2
UBE2D3-206ENST00000357194 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
UBE2D3-206ENST00000357194 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
UBE2D3-206ENST00000357194 TIAM2Q8IVF5 1701 aa13.81□□□□□ -0.2
UBE2D3-206ENST00000357194 TBC1D9BQ66K14 1250 aa13.81□□□□□ -0.2
UBE2D3-206ENST00000357194 CCER1Q8TC90 406 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-206ENST00000357194 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-206ENST00000357194 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 TEFQ10587 303 aa13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 DPY19L2Q6NUT2 758 aa13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 ZNF790Q6PG37 636 aa13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 ZNF622Q969S3 477 aaKnown RBP eCLIP13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 TEX13AQ9BXU3 409 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 HEG1Q9ULI3 1381 aa13.8□□□□□ -0.2
UBE2D3-206ENST00000357194 GNAT3A8MTJ3 354 aa13.79□□□□□ -0.2
UBE2D3-206ENST00000357194 POTECB2RU33 542 aa13.79□□□□□ -0.2
UBE2D3-206ENST00000357194 U2SURPO15042 1029 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-206ENST00000357194 PDE6BP35913 854 aa13.79□□□□□ -0.2
UBE2D3-206ENST00000357194 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
UBE2D3-206ENST00000357194 BRIP1Q9BX63 1249 aa13.79□□□□□ -0.2
UBE2D3-206ENST00000357194 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-206ENST00000357194 PDZRN3Q9UPQ7 1066 aa13.79□□□□□ -0.2
UBE2D3-206ENST00000357194 C21orf2O43822 256 aa13.78□□□□□ -0.2
UBE2D3-206ENST00000357194 IL6STP40189 918 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-206ENST00000357194 PRR5LQ6MZQ0 368 aa13.78□□□□□ -0.2
UBE2D3-206ENST00000357194 GAS2L2Q8NHY3 880 aa13.78□□□□□ -0.2
UBE2D3-206ENST00000357194 SCN7AQ01118 1682 aa13.78□□□□□ -0.2
UBE2D3-206ENST00000357194 SIPA1L3O60292 1781 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-206ENST00000357194 FER1L6Q2WGJ9 1857 aa13.78□□□□□ -0.2
UBE2D3-206ENST00000357194 A1BGP04217 495 aa13.77□□□□□ -0.21
UBE2D3-206ENST00000357194 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-206ENST00000357194 ERFEQ4G0M1 354 aa13.77□□□□□ -0.21
UBE2D3-206ENST00000357194 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-206ENST00000357194 DICER1Q9UPY3 1922 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-206ENST00000357194 COL11A2P13942 1736 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-206ENST00000357194 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-206ENST00000357194 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
UBE2D3-206ENST00000357194 SETDB2Q96T68 719 aa13.76□□□□□ -0.21
UBE2D3-206ENST00000357194 NPHP1O15259 732 aa13.75□□□□□ -0.21
UBE2D3-206ENST00000357194 CAPN15O75808 1086 aa13.75□□□□□ -0.21
UBE2D3-206ENST00000357194 TNS4Q8IZW8 715 aa13.75□□□□□ -0.21
UBE2D3-206ENST00000357194 CNBD1Q8NA66 436 aa13.75□□□□□ -0.21
UBE2D3-206ENST00000357194 CACNA1SQ13698 1873 aa13.74□□□□□ -0.21
UBE2D3-206ENST00000357194 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
UBE2D3-206ENST00000357194 KCNQ3O43525 872 aa13.74□□□□□ -0.21
UBE2D3-206ENST00000357194 CAMTA2O94983 1202 aa13.74□□□□□ -0.21
UBE2D3-206ENST00000357194 CNKSR1Q969H4 720 aa13.74□□□□□ -0.21
UBE2D3-206ENST00000357194 TAOK3Q9H2K8 898 aa13.74□□□□□ -0.21
UBE2D3-206ENST00000357194 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
UBE2D3-206ENST00000357194 LTBP3Q9NS15 1303 aa13.73□□□□□ -0.21
UBE2D3-206ENST00000357194 HSPA1AP0DMV8 641 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms