RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
SPTBN1-202ENST00000356805 LRRC9Q6ZRR7 1453 aa13.3□□□□□ -0.28
SPTBN1-202ENST00000356805 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 CTNNA3Q9UI47 895 aa13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 NUP88Q99567 741 aaPredicted RBP13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 FERP16591 822 aa13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 NAA15Q9BXJ9 866 aaKnown RBP13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 CCDC175P0C221 793 aa13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 LMAN1P49257 510 aa13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 CCDC96Q2M329 555 aa13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
SPTBN1-202ENST00000356805 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 GPATCH11Q8N954 259 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 PUF60Q9UHX1 559 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 HFM1A2PYH4 1435 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 PRPF4BQ13523 1007 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 ARFGAP3Q9NP61 516 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 SSX2IPQ9Y2D8 614 aa13.28□□□□□ -0.28
SPTBN1-202ENST00000356805 ARL1P40616 181 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-202ENST00000356805 CUL5Q93034 780 aa13.27□□□□□ -0.28
SPTBN1-202ENST00000356805 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.28
SPTBN1-202ENST00000356805 SPTY2D1Q68D10 685 aaPredicted RBP13.27□□□□□ -0.29
SPTBN1-202ENST00000356805 ZWINTO95229 277 aa13.27□□□□□ -0.29
SPTBN1-202ENST00000356805 SPECC1Q5M775 1068 aa13.27□□□□□ -0.29
SPTBN1-202ENST00000356805 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
SPTBN1-202ENST00000356805 ZNF354CQ86Y25 554 aa13.27□□□□□ -0.29
SPTBN1-202ENST00000356805 ZKSCAN5Q9Y2L8 839 aa13.27□□□□□ -0.29
SPTBN1-202ENST00000356805 URI1O94763 535 aaPredicted RBP13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 TNPO1Q92973 898 aaKnown RBP13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 PAFAH1B1P43034 410 aa13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 TDRD12Q587J7 1177 aaKnown RBP13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 TSNARE1Q96NA8 513 aa13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 HLTFQ14527 1009 aaKnown RBP eCLIP13.26□□□□□ -0.296e-10■□□□□ 9.9
SPTBN1-202ENST00000356805 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 ERICH3Q5RHP9 1530 aa13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 TOP1P11387 765 aaKnown RBP13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 HSPA4P34932 840 aa13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 TAOK3Q9H2K8 898 aa13.26□□□□□ -0.29
SPTBN1-202ENST00000356805 FGFR1OPO95684 399 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 CCDC82Q8N4S0 544 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 C16orf45Q96MC5 204 aaPredicted RBP13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 DZIP1Q86YF9 867 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 ZPR1O75312 459 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 APBB1IPQ7Z5R6 666 aaPredicted RBP13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 SNW1Q13573 536 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 IL1RAPL2Q9NP60 686 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 GUCY1B3Q02153 619 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 PPP1R14CQ8TAE6 165 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 A6NNZ2 444 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 TUBB8Q3ZCM7 444 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 CAVIN4Q5BKX8 364 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 TBC1D2Q9BYX2 928 aa13.25□□□□□ -0.29
SPTBN1-202ENST00000356805 CEP135Q66GS9 1140 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 NKTRP30414 1462 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 ZFP91Q96JP5 570 aaPredicted RBP13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 TMEM266Q2M3C6 531 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 OGFRQ9NZT2 677 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 USO1O60763 962 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 IPO4Q8TEX9 1081 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 FSD2A1L4K1 749 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 STX1AQ16623 288 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 CPLX3Q8WVH0 158 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 MMRN2Q9H8L6 949 aa13.24□□□□□ -0.29
SPTBN1-202ENST00000356805 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 PTPRGP23470 1445 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 ADCY5O95622 1261 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 UBE2HP62256 183 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 RANBP6O60518 1105 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 SYCP3Q8IZU3 236 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 RASSF4Q9H2L5 321 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 NOP2P46087 812 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 DDX12PQ92771 950 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 SAMM50Q9Y512 469 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 TXNDC2Q86VQ3 553 aa13.23□□□□□ -0.29
SPTBN1-202ENST00000356805 GABPB1Q06547 395 aaPredicted RBP13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 IKBKGQ9Y6K9 419 aa13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 TRERF1Q96PN7 1200 aa13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 PAIP2Q9BPZ3 127 aaKnown RBP13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 NOLC1Q14978 699 aaKnown RBP eCLIP13.22□□□□□ -0.292e-10■□□□□ 9.1
SPTBN1-202ENST00000356805 RAB34Q9BZG1 259 aa13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 NAPBQ9H115 298 aa13.22□□□□□ -0.29
SPTBN1-202ENST00000356805 EHMT1Q9H9B1 1298 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms