RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 UBTFL1P0CB47 393 aaPredicted RBP32.04■■■□□ 2.72
CLK2-201ENST00000355560 GLI3P10071 1580 aa32.03■■■□□ 2.72
CLK2-201ENST00000355560 TOM1O60784 492 aa32.03■■■□□ 2.72
CLK2-201ENST00000355560 MAP3K2Q9Y2U5 619 aa32.03■■■□□ 2.72
CLK2-201ENST00000355560 LRRFIP2Q9Y608 721 aaKnown RBP32.03■■■□□ 2.72
CLK2-201ENST00000355560 PIP4K2BP78356 416 aa32.02■■■□□ 2.72
CLK2-201ENST00000355560 KSR2Q6VAB6 950 aa32.02■■■□□ 2.72
CLK2-201ENST00000355560 SEC24BO95487 1268 aa32.02■■■□□ 2.72
CLK2-201ENST00000355560 ZBTB47Q9UFB7 747 aaPredicted RBP32.01■■■□□ 2.71
CLK2-201ENST00000355560 USP16Q9Y5T5 823 aa32■■■□□ 2.71
CLK2-201ENST00000355560 PLCH1Q4KWH8 1693 aa32■■■□□ 2.71
CLK2-201ENST00000355560 LAMB4A4D0S4 1761 aa32■■■□□ 2.71
CLK2-201ENST00000355560 TOGARAM1Q9Y4F4 1720 aa31.99■■■□□ 2.71
CLK2-201ENST00000355560 UBR2Q8IWV8 1755 aa31.99■■■□□ 2.71
CLK2-201ENST00000355560 PAPPAQ13219 1627 aa31.99■■■□□ 2.71
CLK2-201ENST00000355560 DDX58O95786 925 aaKnown RBP31.99■■■□□ 2.71
CLK2-201ENST00000355560 DISP2A7MBM2 1401 aa31.99■■■□□ 2.71
CLK2-201ENST00000355560 MYL6BP14649 208 aa31.98■■■□□ 2.71
CLK2-201ENST00000355560 AIMP1Q12904 312 aaKnown RBP31.98■■■□□ 2.71
CLK2-201ENST00000355560 ADAMTS2O95450 1211 aa31.97■■■□□ 2.71
CLK2-201ENST00000355560 PNMA6EA0A0J9YXQ4 647 aa31.97■■■□□ 2.71
CLK2-201ENST00000355560 ATP8B2P98198 1209 aa31.97■■■□□ 2.71
CLK2-201ENST00000355560 APBB1O00213 710 aa31.96■■■□□ 2.71
CLK2-201ENST00000355560 NBPF7P0C2Y1 421 aaPredicted RBP31.96■■■□□ 2.71
CLK2-201ENST00000355560 BMP2KLQ5H9B9 411 aa31.96■■■□□ 2.71
CLK2-201ENST00000355560 BCL11AQ9H165 835 aa31.95■■■□□ 2.71
CLK2-201ENST00000355560 KCPQ6ZWJ8 1503 aa31.94■■■□□ 2.7
CLK2-201ENST00000355560 ALDH1L1O75891 902 aa31.93■■■□□ 2.7
CLK2-201ENST00000355560 NOP58Q9Y2X3 529 aaKnown RBP31.93■■■□□ 2.7
CLK2-201ENST00000355560 WNK3Q9BYP7 1800 aa31.92■■■□□ 2.7
CLK2-201ENST00000355560 SMARCA5O60264 1052 aaPredicted RBP31.92■■■□□ 2.7
CLK2-201ENST00000355560 XAGE3Q8WTP9 111 aa31.92■■■□□ 2.7
CLK2-201ENST00000355560 PLEKHM2Q8IWE5 1019 aa31.91■■■□□ 2.7
CLK2-201ENST00000355560 EXOC6BQ9Y2D4 811 aa31.91■■■□□ 2.7
CLK2-201ENST00000355560 NRAPQ86VF7 1730 aa31.91■■■□□ 2.7
CLK2-201ENST00000355560 PIP4K2AP48426 406 aaPredicted RBP31.91■■■□□ 2.7
CLK2-201ENST00000355560 CWF19L2Q2TBE0 894 aaKnown RBP31.91■■■□□ 2.7
CLK2-201ENST00000355560 COPS6Q7L5N1 327 aa31.91■■■□□ 2.7
CLK2-201ENST00000355560 LRP10Q7Z4F1 713 aa31.91■■■□□ 2.7
CLK2-201ENST00000355560 RIC3Q7Z5B4 369 aa31.91■■■□□ 2.7
CLK2-201ENST00000355560 TNS2Q63HR2 1409 aa31.9■■■□□ 2.7
CLK2-201ENST00000355560 C16orf71Q8IYS4 520 aaPredicted RBP31.9■■■□□ 2.7
CLK2-201ENST00000355560 DDRGK1Q96HY6 314 aa31.9■■■□□ 2.7
CLK2-201ENST00000355560 UPF2Q9HAU5 1272 aaKnown RBP31.9■■■□□ 2.7
CLK2-201ENST00000355560 TMOD3Q9NYL9 352 aa31.9■■■□□ 2.7
CLK2-201ENST00000355560 LINS1Q8NG48 757 aa31.9■■■□□ 2.7
CLK2-201ENST00000355560 NUTM2BA6NNL0 878 aaPredicted RBP31.89■■■□□ 2.7
CLK2-201ENST00000355560 NUTM2EB1AL46 878 aaPredicted RBP31.89■■■□□ 2.7
CLK2-201ENST00000355560 ERICH6Q7L0X2 663 aa31.89■■■□□ 2.7
CLK2-201ENST00000355560 NUTM2AQ8IVF1 878 aaPredicted RBP31.89■■■□□ 2.7
CLK2-201ENST00000355560 C9orf78Q9NZ63 289 aaPredicted RBP31.88■■■□□ 2.69
CLK2-201ENST00000355560 UBAP1LF5GYI3 381 aa31.87■■■□□ 2.69
CLK2-201ENST00000355560 PTCD1O75127 700 aaKnown RBP31.87■■■□□ 2.69
CLK2-201ENST00000355560 PPP1R42Q7Z4L9 355 aa31.87■■■□□ 2.69
CLK2-201ENST00000355560 OTUD7AQ8TE49 926 aaPredicted RBP31.87■■■□□ 2.69
CLK2-201ENST00000355560 SSH3Q8TE77 659 aa31.87■■■□□ 2.69
CLK2-201ENST00000355560 IBTKQ9P2D0 1353 aaPredicted RBP31.86■■■□□ 2.69
CLK2-201ENST00000355560 ERBB4Q15303 1308 aa31.85■■■□□ 2.69
CLK2-201ENST00000355560 ITGB4P16144 1822 aa31.84■■■□□ 2.69
CLK2-201ENST00000355560 EXOC5O00471 708 aa31.84■■■□□ 2.69
CLK2-201ENST00000355560 NEXNQ0ZGT2 675 aa31.84■■■□□ 2.69
CLK2-201ENST00000355560 ANKRD13DQ6ZTN6 518 aa31.84■■■□□ 2.69
CLK2-201ENST00000355560 SRGAP3O43295 1099 aa31.83■■■□□ 2.69
CLK2-201ENST00000355560 POLA2Q14181 598 aa31.83■■■□□ 2.69
CLK2-201ENST00000355560 LRRCC1Q9C099 1032 aa31.83■■■□□ 2.69
CLK2-201ENST00000355560 GSPT1P15170 499 aaKnown RBP31.82■■■□□ 2.69
CLK2-201ENST00000355560 SPATA31A1Q5TZJ5 1347 aa31.82■■■□□ 2.68
CLK2-201ENST00000355560 GRM8O00222 908 aa31.82■■■□□ 2.68
CLK2-201ENST00000355560 IGKV5-2P06315 115 aa31.82■■■□□ 2.68
CLK2-201ENST00000355560 TTC22Q5TAA0 569 aa31.82■■■□□ 2.68
CLK2-201ENST00000355560 METTL22Q9BUU2 404 aaPredicted RBP31.82■■■□□ 2.68
CLK2-201ENST00000355560 MFAP1P55081 439 aaKnown RBP31.81■■■□□ 2.68
CLK2-201ENST00000355560 PIGBQ92521 554 aa31.81■■■□□ 2.68
CLK2-201ENST00000355560 ARFGEF2Q9Y6D5 1785 aa31.81■■■□□ 2.68
CLK2-201ENST00000355560 LRP6O75581 1613 aa31.81■■■□□ 2.68
CLK2-201ENST00000355560 NWD2Q9ULI1 1742 aa31.81■■■□□ 2.68
CLK2-201ENST00000355560 TBC1D32Q96NH3 1257 aa31.81■■■□□ 2.68
CLK2-201ENST00000355560 NBPF26B4DH59 902 aa31.8■■■□□ 2.68
CLK2-201ENST00000355560 NBPF14Q5TI25 921 aa31.8■■■□□ 2.68
CLK2-201ENST00000355560 NBPF10Q6P3W6 841 aaKnown RBP31.8■■■□□ 2.68
CLK2-201ENST00000355560 NBPF15Q8N660 670 aa31.8■■■□□ 2.68
CLK2-201ENST00000355560 MYD88Q99836 296 aa31.8■■■□□ 2.68
CLK2-201ENST00000355560 HDAC5Q9UQL6 1122 aa31.8■■■□□ 2.68
CLK2-201ENST00000355560 UTYO14607 1347 aa31.79■■■□□ 2.68
CLK2-201ENST00000355560 NEURL1BA8MQ27 555 aa31.78■■■□□ 2.68
CLK2-201ENST00000355560 CDCA7Q9BWT1 371 aaPredicted RBP31.78■■■□□ 2.68
CLK2-201ENST00000355560 ASAP1Q9ULH1 1129 aa31.78■■■□□ 2.68
CLK2-201ENST00000355560 THRAP3Q9Y2W1 955 aaKnown RBP31.78■■■□□ 2.68
CLK2-201ENST00000355560 SLIT2O94813 1529 aa31.77■■■□□ 2.68
CLK2-201ENST00000355560 MTX1Q13505 466 aa31.77■■■□□ 2.68
CLK2-201ENST00000355560 SURF6O75683 361 aaKnown RBP31.76■■■□□ 2.68
CLK2-201ENST00000355560 A1BGP04217 495 aa31.76■■■□□ 2.67
CLK2-201ENST00000355560 KAT6BQ8WYB5 2073 aa31.76■■■□□ 2.67
CLK2-201ENST00000355560 PLBD2Q8NHP8 589 aa31.75■■■□□ 2.67
CLK2-201ENST00000355560 BCL9O00512 1426 aa31.75■■■□□ 2.67
CLK2-201ENST00000355560 GCKRQ14397 625 aa31.75■■■□□ 2.67
CLK2-201ENST00000355560 ATG3Q9NT62 314 aa31.75■■■□□ 2.67
CLK2-201ENST00000355560 AFDNP55196 1824 aaKnown RBP31.74■■■□□ 2.67
CLK2-201ENST00000355560 TBC1D9Q6ZT07 1266 aa31.74■■■□□ 2.67
CLK2-201ENST00000355560 SUCLG2Q96I99 432 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms