RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 MAP9Q49MG5 647 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 TNIP1Q15025 636 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 KARSQ15046 597 aaKnown RBP9.12□□□□□ -0.95
VANGL1-202ENST00000355485 LRRC45Q96CN5 670 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 UBE4AQ14139 1066 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 FSIP1Q8NA03 581 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 SERPINA10Q9UK55 444 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 ANKRD1Q15327 319 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 IQCEQ6IPM2 695 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 NECAB1Q8N987 351 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 WDR63Q8IWG1 891 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 RBM5P52756 815 aaKnown RBP eCLIP9.11□□□□□ -0.95
VANGL1-202ENST00000355485 IFFO1Q0D2I5 559 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 CCDC91Q7Z6B0 441 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 PRPF31Q8WWY3 499 aaKnown RBP9.11□□□□□ -0.95
VANGL1-202ENST00000355485 CCDC171Q6TFL3 1326 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 ZBTB24O43167 697 aaPredicted RBP9.11□□□□□ -0.95
VANGL1-202ENST00000355485 GNAI3P08754 354 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 AACSQ86V21 672 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 ZGPATQ8N5A5 531 aaKnown RBP9.11□□□□□ -0.95
VANGL1-202ENST00000355485 TAF4BQ92750 862 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 MIS18AQ9NYP9 233 aa9.11□□□□□ -0.95
VANGL1-202ENST00000355485 DUSP27Q5VZP5 1158 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 RAB11FIP4Q86YS3 637 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 TMX3Q96JJ7 454 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 RHOXF2BP0C7M4 288 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 ZNF165P49910 485 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 RHOXF2Q9BQY4 288 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 IVLP07476 585 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 PSME1Q06323 249 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 NAA25Q14CX7 972 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 EFCAB2Q5VUJ9 269 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 SPINK5Q9NQ38 1064 aaPredicted RBP9.1□□□□□ -0.95
VANGL1-202ENST00000355485 HFM1A2PYH4 1435 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 DTNBO60941 627 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 ANKRD18BA2A2Z9 1011 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 STX6O43752 255 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 CCT2P78371 535 aaKnown RBP9.1□□□□□ -0.95
VANGL1-202ENST00000355485 TTC39AQ5SRH9 613 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 SPATA24Q86W54 205 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 CCDC150Q8NCX0 1101 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 NUP88Q99567 741 aaPredicted RBP9.1□□□□□ -0.95
VANGL1-202ENST00000355485 FAM160A1Q05DH4 1040 aa9.1□□□□□ -0.95
VANGL1-202ENST00000355485 RAB3GAP1Q15042 981 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 PLEKHH2Q8IVE3 1493 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 KIF6Q6ZMV9 814 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 SPG7Q9UQ90 795 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 FANCD2Q9BXW9 1451 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 GBP6Q6ZN66 633 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 CFAP57Q96MR6 1250 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 KAT6BQ8WYB5 2073 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 CCDC175P0C221 793 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 HYPKQ9NX55 129 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 STX1AQ16623 288 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 CCDC30Q5VVM6 783 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 AOPEPQ8N6M6 819 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 MYRIPQ8NFW9 859 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 SLC12A5Q9H2X9 1139 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 NOL7Q9UMY1 257 aaKnown RBP9.09□□□□□ -0.95
VANGL1-202ENST00000355485 CLGNO14967 610 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 HSF2BPO75031 334 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 PIP4K2AP48426 406 aaPredicted RBP9.09□□□□□ -0.95
VANGL1-202ENST00000355485 ELF2Q15723 593 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 SLC26A8Q96RN1 970 aa9.09□□□□□ -0.95
VANGL1-202ENST00000355485 CCDC69A6NI79 296 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 CETN2P41208 172 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 NBPF11Q86T75 865 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 ATRIPQ8WXE1 791 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 BCL2L12Q9HB09 334 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 LUZP1Q86V48 1076 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 HIP1O00291 1037 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 SF3A3Q12874 501 aaKnown RBP eCLIP9.08□□□□□ -0.96
VANGL1-202ENST00000355485 HLTFQ14527 1009 aaKnown RBP eCLIP9.08□□□□□ -0.96
VANGL1-202ENST00000355485 CFAP70Q5T0N1 1121 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 SSH1Q8WYL5 1049 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 ARFGAP3Q9NP61 516 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 CAPZA3Q96KX2 299 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 PCDHB15Q9Y5E8 787 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 BICRAQ9NZM4 1560 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 HMGB3O15347 200 aaKnown RBP9.08□□□□□ -0.96
VANGL1-202ENST00000355485 NEMFO60524 1076 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 MX1P20591 662 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 ARID4AP29374 1257 aaPredicted RBP9.08□□□□□ -0.96
VANGL1-202ENST00000355485 TERF1P54274 439 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 UBE2HP62256 183 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 TBC1D2BQ9UPU7 963 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 KIF20AO95235 890 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 GSDMDP57764 484 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 SPA17Q15506 151 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 JMYQ8N9B5 988 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 FERMT1Q9BQL6 677 aa9.08□□□□□ -0.96
VANGL1-202ENST00000355485 KIF4AO95239 1232 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 DMTNQ08495 405 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 POTEB2H3BUK9 544 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 SARNPP82979 210 aaKnown RBP9.07□□□□□ -0.96
VANGL1-202ENST00000355485 MSL1Q68DK7 614 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 FERMT2Q96AC1 680 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 DNM1Q05193 864 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms