RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CEBPAP49715 358 aaPredicted RBP21■□□□□ 0.95
COL18A1-202ENST00000355480 TSG101Q99816 390 aa21■□□□□ 0.95
COL18A1-202ENST00000355480 MCM4P33991 863 aa21■□□□□ 0.95
COL18A1-202ENST00000355480 KLHL10Q6JEL2 608 aa21■□□□□ 0.95
COL18A1-202ENST00000355480 EIF3JO75822 258 aaKnown RBP20.99■□□□□ 0.95
COL18A1-202ENST00000355480 RBM10P98175 930 aaKnown RBP20.99■□□□□ 0.95
COL18A1-202ENST00000355480 KIAA0586Q9BVV6 1533 aa20.99■□□□□ 0.95
COL18A1-202ENST00000355480 GUCY1B3Q02153 619 aa20.99■□□□□ 0.95
COL18A1-202ENST00000355480 RAB34Q9BZG1 259 aa20.99■□□□□ 0.95
COL18A1-202ENST00000355480 DNAI2Q9GZS0 605 aa20.99■□□□□ 0.95
COL18A1-202ENST00000355480 MAGI1Q96QZ7 1491 aaPredicted RBP20.99■□□□□ 0.95
COL18A1-202ENST00000355480 KRT28Q7Z3Y7 464 aa20.99■□□□□ 0.95
COL18A1-202ENST00000355480 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
COL18A1-202ENST00000355480 CCDC66A2RUB6 948 aa20.99■□□□□ 0.95
COL18A1-202ENST00000355480 PAXIP1Q6ZW49 1069 aaPredicted RBP20.99■□□□□ 0.95
COL18A1-202ENST00000355480 GBP2P32456 591 aaPredicted RBP20.98■□□□□ 0.95
COL18A1-202ENST00000355480 IFIT3O14879 490 aaKnown RBP20.98■□□□□ 0.95
COL18A1-202ENST00000355480 TMEM266Q2M3C6 531 aa20.98■□□□□ 0.95
COL18A1-202ENST00000355480 CETN2P41208 172 aa20.98■□□□□ 0.95
COL18A1-202ENST00000355480 SH2B1Q9NRF2 756 aaPredicted RBP20.98■□□□□ 0.95
COL18A1-202ENST00000355480 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
COL18A1-202ENST00000355480 EZRP15311 586 aaKnown RBP20.98■□□□□ 0.95
COL18A1-202ENST00000355480 FKBP15Q5T1M5 1219 aa20.98■□□□□ 0.95
COL18A1-202ENST00000355480 ADGRL1O94910 1474 aa20.98■□□□□ 0.95
COL18A1-202ENST00000355480 LRPPRCP42704 1394 aaKnown RBP20.98■□□□□ 0.95
COL18A1-202ENST00000355480 SYCE3A1L190 88 aa20.97■□□□□ 0.95
COL18A1-202ENST00000355480 GOLGA8AA7E2F4 631 aa20.97■□□□□ 0.95
COL18A1-202ENST00000355480 GOLGA8BA8MQT2 603 aa20.97■□□□□ 0.95
COL18A1-202ENST00000355480 CCDC194A0A1B0GVG4 234 aa20.97■□□□□ 0.95
COL18A1-202ENST00000355480 SSRP1Q08945 709 aaKnown RBP20.97■□□□□ 0.95
COL18A1-202ENST00000355480 KIAA0754O94854 1291 aa20.97■□□□□ 0.95
COL18A1-202ENST00000355480 NLRP5P59047 1200 aa20.97■□□□□ 0.95
COL18A1-202ENST00000355480 SPA17Q15506 151 aa20.97■□□□□ 0.95
COL18A1-202ENST00000355480 MYCNP04198 464 aaPredicted RBP20.96■□□□□ 0.95
COL18A1-202ENST00000355480 MAP3K2Q9Y2U5 619 aa20.96■□□□□ 0.95
COL18A1-202ENST00000355480 FLIIQ13045 1269 aa20.96■□□□□ 0.95
COL18A1-202ENST00000355480 CATIPQ7Z7H3 387 aa20.96■□□□□ 0.95
COL18A1-202ENST00000355480 SCAND2PQ9GZW5 306 aaPredicted RBP20.96■□□□□ 0.95
COL18A1-202ENST00000355480 ADGRF5Q8IZF2 1346 aa20.96■□□□□ 0.95
COL18A1-202ENST00000355480 IFNL2Q8IZJ0 200 aa20.96■□□□□ 0.95
COL18A1-202ENST00000355480 TOP2BQ02880 1626 aa20.95■□□□□ 0.95
COL18A1-202ENST00000355480 CACNA2D4Q7Z3S7 1137 aa20.95■□□□□ 0.94
COL18A1-202ENST00000355480 CCDC148Q8NFR7 591 aa20.95■□□□□ 0.94
COL18A1-202ENST00000355480 TEX13AQ9BXU3 409 aaPredicted RBP20.95■□□□□ 0.94
COL18A1-202ENST00000355480 CDC5LQ99459 802 aaKnown RBP20.95■□□□□ 0.94
COL18A1-202ENST00000355480 EHMT1Q9H9B1 1298 aa20.95■□□□□ 0.94
COL18A1-202ENST00000355480 GOLGA6L7A0A1B0GV03 622 aa20.94■□□□□ 0.94
COL18A1-202ENST00000355480 LDHAL6AQ6ZMR3 332 aa20.94■□□□□ 0.94
COL18A1-202ENST00000355480 IDI1Q13907 227 aa20.94■□□□□ 0.94
COL18A1-202ENST00000355480 ANO10Q9NW15 660 aa20.94■□□□□ 0.94
COL18A1-202ENST00000355480 DDX46Q7L014 1031 aaKnown RBP20.94■□□□□ 0.94
COL18A1-202ENST00000355480 FEZ1Q99689 392 aa20.94■□□□□ 0.94
COL18A1-202ENST00000355480 NAIPQ13075 1403 aa20.94■□□□□ 0.94
COL18A1-202ENST00000355480 CALRP27797 417 aaKnown RBP20.94■□□□□ 0.94
COL18A1-202ENST00000355480 ATP5J2-PTCD1G3V325 749 aa20.93■□□□□ 0.94
COL18A1-202ENST00000355480 CWC25Q9NXE8 425 aaPredicted RBP20.93■□□□□ 0.94
COL18A1-202ENST00000355480 CAMSAP2Q08AD1 1489 aa20.93■□□□□ 0.94
COL18A1-202ENST00000355480 PLCD4Q9BRC7 762 aa20.93■□□□□ 0.94
COL18A1-202ENST00000355480 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
COL18A1-202ENST00000355480 GOLIM4O00461 696 aa20.93■□□□□ 0.94
COL18A1-202ENST00000355480 PTPRCP08575 1304 aa20.93■□□□□ 0.94
COL18A1-202ENST00000355480 CCT2P78371 535 aaKnown RBP20.93■□□□□ 0.94
COL18A1-202ENST00000355480 TTC21BQ7Z4L5 1316 aa20.92■□□□□ 0.94
COL18A1-202ENST00000355480 SFPQP23246 707 aaKnown RBP eCLIP20.92■□□□□ 0.94
COL18A1-202ENST00000355480 TAF3Q5VWG9 929 aa20.92■□□□□ 0.94
COL18A1-202ENST00000355480 TTF1Q15361 905 aaPredicted RBP20.92■□□□□ 0.94
COL18A1-202ENST00000355480 CCDC97Q96F63 343 aaPredicted RBP20.92■□□□□ 0.94
COL18A1-202ENST00000355480 NKTRP30414 1462 aaKnown RBP20.92■□□□□ 0.94
COL18A1-202ENST00000355480 LDHCP07864 332 aa20.92■□□□□ 0.94
COL18A1-202ENST00000355480 VPS36Q86VN1 386 aa20.92■□□□□ 0.94
COL18A1-202ENST00000355480 EVI5LQ96CN4 794 aa20.92■□□□□ 0.94
COL18A1-202ENST00000355480 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
COL18A1-202ENST00000355480 CCDC102AQ96A19 550 aa20.91■□□□□ 0.94
COL18A1-202ENST00000355480 LIG1P18858 919 aa20.91■□□□□ 0.94
COL18A1-202ENST00000355480 PPP1R42Q7Z4L9 355 aa20.91■□□□□ 0.94
COL18A1-202ENST00000355480 SNRKQ9NRH2 765 aa20.91■□□□□ 0.94
COL18A1-202ENST00000355480 FAM135AQ9P2D6 1515 aa20.91■□□□□ 0.94
COL18A1-202ENST00000355480 FGFR1OPO95684 399 aaKnown RBP20.91■□□□□ 0.94
COL18A1-202ENST00000355480 LIMCH1Q9UPQ0 1083 aa20.91■□□□□ 0.94
COL18A1-202ENST00000355480 BAG4O95429 457 aaKnown RBP20.9■□□□□ 0.94
COL18A1-202ENST00000355480 RFC4P35249 363 aa20.9■□□□□ 0.94
COL18A1-202ENST00000355480 ECHDC1Q9NTX5 307 aa20.9■□□□□ 0.94
COL18A1-202ENST00000355480 ZNF622Q969S3 477 aaKnown RBP eCLIP20.9■□□□□ 0.94
COL18A1-202ENST00000355480 KIF20AO95235 890 aa20.9■□□□□ 0.94
COL18A1-202ENST00000355480 BAG3O95817 575 aa20.9■□□□□ 0.94
COL18A1-202ENST00000355480 C20orf194Q5TEA3 1177 aa20.9■□□□□ 0.94
COL18A1-202ENST00000355480 UBE3BQ7Z3V4 1068 aa20.89■□□□□ 0.94
COL18A1-202ENST00000355480 CCDC150Q8NCX0 1101 aa20.89■□□□□ 0.94
COL18A1-202ENST00000355480 ANAPC15P60006 121 aa20.89■□□□□ 0.93
COL18A1-202ENST00000355480 CNNM3Q8NE01 707 aa20.89■□□□□ 0.93
COL18A1-202ENST00000355480 ANKRD24Q8TF21 1146 aa20.89■□□□□ 0.93
COL18A1-202ENST00000355480 VAT1LQ9HCJ6 419 aa20.89■□□□□ 0.93
COL18A1-202ENST00000355480 IQGAP2Q13576 1575 aa20.89■□□□□ 0.93
COL18A1-202ENST00000355480 CCDC183Q5T5S1 534 aa20.89■□□□□ 0.93
COL18A1-202ENST00000355480 CABP5Q9NP86 173 aa20.89■□□□□ 0.93
COL18A1-202ENST00000355480 TSPY2A6NKD2 308 aa20.89■□□□□ 0.93
COL18A1-202ENST00000355480 TRMT1LQ7Z2T5 733 aaKnown RBP20.89■□□□□ 0.93
COL18A1-202ENST00000355480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.937e-7■■■□□ 16.3
COL18A1-202ENST00000355480 CHRNA2Q15822 529 aa20.88■□□□□ 0.93
COL18A1-202ENST00000355480 UQCRHLA0A096LP55 91 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms